ISMARA results: GNF_1_PrefrontalCortex

Sample name: GNF_1_PrefrontalCortex

Sorted Z-values histogram for the sample GNF_1_PrefrontalCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	6.592	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MAFB.p2	6.370	MAFB
REST.p3	5.617	REST
EGR1..3.p2	5.328	EGR3 EGR1 EGR2
HOX{A6,A7,B6,B7}.p2	5.321	HOXB6 HOXA7 HOXB7 HOXA6
GATA1..3.p2	5.147	GATA1 GATA2 GATA3
HIC1.p2	5.138	HIC1
KLF12.p2	4.944	KLF12
UGUGCUU	4.802
MZF1.p2	4.381	MZF1
ZFP161.p2	4.355	ZFP161
FOX{I1,J2}.p2	4.279	FOXI1 FOXJ2
DBP.p2	4.117	DBP
GUGCAAA	4.036
AAUACUG	3.895
MYOD1.p2	3.850	MYOD1
ZIC1..3.p2	3.837	ZIC1 ZIC2 ZIC3
IKZF2.p2	3.606	IKZF2
SOX2.p2	3.579	SOX2
JUN.p2	3.546	JUN JUND JUNB
TGIF1.p2	3.483	TGIF1
NHLH1,2.p2	3.461	NHLH1 NHLH2
GGCAGUG	3.455
GTF2I.p2	3.236	GTF2I
PAX2.p2	3.181	PAX2
ATF2.p2	3.080	ATF2
POU5F1.p2	3.055	POU5F1
ESRRA.p2	2.924	ESRRA
UUGGUCC	2.913
TAL1_TCF{3,4,12}.p2	2.885	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
MTF1.p2	2.879	MTF1
AUGGCUU	2.863
ACAUUCA	2.745
TCF4_dimer.p2	2.741	TCF4
UGCAUAG	2.739
PAX4.p2	2.732	PAX4
CAGCAGG	2.718
SRY.p2	2.638	SRY
SPZ1.p2	2.623	SPZ1
TFEB.p2	2.593	TFEB
GUCAGUU	2.592
RREB1.p2	2.491	RREB1
MEF2{A,B,C,D}.p2	2.420	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GGAAGAC	2.416
AUUGCAC	2.379
LMO2.p2	2.375	LMO2
ZBTB6.p2	2.329	ZBTB6
GCUGGUG	2.293
MAZ.p2	2.133	MAZ
FOXO1,3,4.p2	2.112	FOXO1 FOXO4 FOXO3
AGUGCAA	1.957
STAT2,4,6.p2	1.937	STAT2 STAT4 STAT6
HOX{A5,B5}.p2	1.892	HOXB5 HOXA5
EWSR1-FLI1.p2	1.870	FLI1 EWSR1
CUCCCAA	1.844
CTCF.p2	1.819	CTCF
GGCUCAG	1.694
UUGGCAC	1.685
UAAGACG	1.681
TBX4,5.p2	1.609	TBX5 TBX4
NFIX.p2	1.585	NFIX
GGCAAGA	1.562
UCACAGU	1.535
TFCP2.p2	1.509	TFCP2
TLX1..3_NFIC{dimer}.p2	1.489	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CCAGCAU	1.420
CAGUGCA	1.414
SREBF1,2.p2	1.379	SREBF1 SREBF2
SOX{8,9,10}.p2	1.334	SOX9 SOX8 SOX10
FOX{D1,D2}.p2	1.310	FOXD2 FOXD1
NR5A1,2.p2	1.256	NR5A1 NR5A2
GCUACAU	1.229
NKX2-3_NKX2-5.p2	1.213	NKX2-5 NKX2-3
EBF1.p2	1.205	EBF1
GAUCAGA	1.179
CDC5L.p2	1.179	CDC5L
FOXP3.p2	1.170	FOXP3
NFIL3.p2	1.095	NFIL3
CUACAGU	1.042
GFI1.p2	1.041	GFI1
GFI1B.p2	1.040	GFI1B
PRRX1,2.p2	1.038	PRRX2 PRRX1
SP1.p2	1.037	SP1
ALX1.p2	0.995	ALX1
SMAD1..7,9.p2	0.943	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AGCAGCA	0.942
NR3C1.p2	0.934	NR3C1
EVI1.p2	0.934	EVI1
AAAGUGC	0.924
RXR{A,B,G}.p2	0.919	RXRA RXRB RXRG
HMGA1,2.p2	0.913	HMGA1 HMGA2
ESR1.p2	0.870	ESR1
HBP1_HMGB_SSRP1_UBTF.p2	0.862	HMGB2 HMGB3 SSRP1 UBTF HBP1
GGAAUGU	0.842
NFE2.p2	0.830	NFE2
GAGAACU	0.828
AUGGCAC	0.827
FOXN1.p2	0.807	FOXN1
TFAP2B.p2	0.746	TFAP2B
GUAAACA	0.737
AAGUGCU	0.737
RXRA_VDR{dimer}.p2	0.717	VDR	$logo of RXRA_VDR{dimer}.p2$
NKX6-1,2.p2	0.680	NKX6-1 NKX6-2
NKX2-2,8.p2	0.675	NKX2-2 NKX2-8
AAGGUGC	0.675
UGUGCGU	0.673
CUX2.p2	0.665	CUX2
POU5F1_SOX2{dimer}.p2	0.655	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
PAX3,7.p2	0.652	PAX7 PAX3
FEV.p2	0.631	FEV
AACAGUC	0.625
PBX1.p2	0.625	PBX1
AACACUG	0.598
UAAGACU	0.597
NFE2L1.p2	0.554	NFE2L1
FOXL1.p2	0.538	FOXL1
UAUUGCU	0.537
HAND1,2.p2	0.493	HAND1 HAND2
UCCCUUU	0.488
AGCUGCC	0.470
ATF4.p2	0.454	ATF4
GZF1.p2	0.417	GZF1
AGCUUAU	0.405
AGCAGCG	0.375
LHX3,4.p2	0.363	LHX3 LHX4
ACUGCAU	0.358
IKZF1.p2	0.331	IKZF1
CDX1,2,4.p2	0.307	CDX1 CDX2 CDX4
PAX5.p2	0.303	PAX5
UGAAAUG	0.299
NR4A2.p2	0.294	NR4A2
NR6A1.p2	0.268	NR6A1
HMX1.p2	0.267	HMX1
CEBPA,B_DDIT3.p2	0.240	DDIT3 CEBPA CEBPB
GGACGGA	0.236
AUGACAC	0.234
GAGAUGA	0.227
NFATC1..3.p2	0.224	NFATC3 NFATC2 NFATC1
HSF1,2.p2	0.215	HSF1 HSF2
GCAGCAU	0.186
NKX3-1.p2	0.176	NKX3-1
UUGGCAA	0.173
RORA.p2	0.162	RORA
CGUGUCU	0.159
POU3F1..4.p2	0.149	POU3F1 POU3F3 POU3F2 POU3F4
LEF1_TCF7_TCF7L1,2.p2	0.121	TCF7 TCF7L2 LEF1 TCF7L1
AACCGUU	0.117
STAT1,3.p3	0.092	STAT1 STAT3
GAUAUGU	0.081
ACUGGCC	0.075
AGGUAGU	0.063
UGCAUUG	0.052
NRF1.p2	0.006	NRF1
FOX{F1,F2,J1}.p2	0.005	FOXF2 FOXJ1 FOXF1
TLX2.p2	-0.025	TLX2
PAX8.p2	-0.039	PAX8
AGUGGUU	-0.062
ACCCGUA	-0.074
EOMES.p2	-0.096	EOMES
PAX6.p2	-0.129	PAX6
GLI1..3.p2	-0.129	GLI1 GLI2 GLI3
GGAGUGU	-0.137
UGACCUA	-0.138
CGUACCG	-0.139
POU6F1.p2	-0.142	POU6F1
AR.p2	-0.144	AR
AAUCUCU	-0.145
NR1H4.p2	-0.156	NR1H4
HIF1A.p2	-0.195	HIF1A
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.201	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ARID5B.p2	-0.233	ARID5B
ATF5_CREB3.p2	-0.234	ATF5 CREB3
GUAGUGU	-0.249
UUGUUCG	-0.268
AAUCUCA	-0.283
SOX5.p2	-0.287	SOX5
PDX1.p2	-0.289	PDX1
NANOG.p2	-0.311	NANOG
AACCUGG	-0.328
VSX1,2.p2	-0.330	VSX2 VSX1
TEAD1.p2	-0.338	TEAD1 TEAD2 TEAD3 TEAD4
STAT5{A,B}.p2	-0.366	STAT5B STAT5A
CACAGUG	-0.374
GTF2A1,2.p2	-0.387	GTF2A1 GTF2A2
NKX3-2.p2	-0.397	NKX3-2
T.p2	-0.418	T
AIRE.p2	-0.424	AIRE
AACGGAA	-0.441
NFE2L2.p2	-0.443	NFE2L2
SNAI1..3.p2	-0.469	SNAI2 SNAI1 SNAI3
UCCAGUU	-0.475
NKX2-1,4.p2	-0.519	NKX2-1 NKX2-4
RXRG_dimer.p3	-0.546	NR1H2 RXRA PPARG PPARA RXRB RXRG
AAUGCCC	-0.554
HOXA9_MEIS1.p2	-0.555	MEIS1 HOXA9
CCUUCAU	-0.608
SPIB.p2	-0.623	SPIB
EN1,2.p2	-0.627	EN1 EN2
MSX1,2.p2	-0.630	MSX1 MSX2
POU1F1.p2	-0.661	POU1F1
ZNF148.p2	-0.673	ZNF148
MYFfamily.p2	-0.673	MYOD1 MYF6 MYF5 MYOG
HOX{A4,D4}.p2	-0.696	HOXA4 HOXD4
UCACAUU	-0.706
GUAACAG	-0.720
PRDM1.p3	-0.734	PRDM1
CRX.p2	-0.751	CRX
ETS1,2.p2	-0.777	ETS2 ETS1
ZNF384.p2	-0.850	ZNF384
FOSL2.p2	-0.871	FOSL2
ACCCUGU	-0.929
NANOG{mouse}.p2	-0.936	NANOG
ZNF423.p2	-0.937	ZNF423
MYBL2.p2	-0.985	MYBL2
ACAGUAC	-0.996
PPARG.p2	-1.026	PPARG
KLF4.p3	-1.029	KLF4
HES1.p2	-1.084	HES1
UUUUUGC	-1.148
RUNX1..3.p2	-1.151	RUNX1 RUNX3 RUNX2
HNF4A_NR2F1,2.p2	-1.175	NR2F1 NR2F2 HNF4A
ZEB1.p2	-1.182	ZEB1
FOX{C1,C2}.p2	-1.253	FOXC1 FOXC2
HLF.p2	-1.268	HLF
AUGUGCC	-1.275
DMAP1_NCOR{1,2}_SMARC.p2	-1.340	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GAUUGUC	-1.357
ZNF143.p2	-1.389	ZNF143
TBP.p2	-1.399	TBP
BACH2.p2	-1.428	BACH2
FOXQ1.p2	-1.552	FOXQ1
CCAGUGU	-1.565
EHF.p2	-1.600	EHF
ONECUT1,2.p2	-1.623	ONECUT2 ONECUT1
ACAGUAU	-1.666
RBPJ.p2	-1.669	RBPJ
TFAP2{A,C}.p2	-1.725	TFAP2C TFAP2A
ATF6.p2	-1.774	ATF6
UAAUGCU	-1.783
PATZ1.p2	-1.808	PATZ1
AHR_ARNT_ARNT2.p2	-1.820	ARNT AHR ARNT2
BPTF.p2	-1.843	BPTF
CREB1.p2	-1.941	CREB1
ADNP_IRX_SIX_ZHX.p2	-1.969	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
TFAP4.p2	-2.015	TFAP4
UCAAGUA	-2.081
TP53.p2	-2.224	TP53
IRF1,2,7.p3	-2.516	IRF1 IRF2 IRF7
ZBTB16.p2	-2.549	ZBTB16
SOX17.p2	-2.600	SOX17
ZNF238.p2	-2.623	ZNF238
FOXD3.p2	-2.667	FOXD3
ELK1,4_GABP{A,B1}.p3	-2.788	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
CCCUGAG	-2.880
GAGGUAG	-2.889
AGCACCA	-2.900
CUUUGGU	-2.925
MYB.p2	-2.937	MYB
bHLH_family.p2	-2.938	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HNF1A.p2	-2.984	HNF1A
FOXA2.p3	-3.136	FOXA2
SRF.p3	-3.147	SRF
XBP1.p3	-3.160	XBP1
GATA6.p2	-3.269	GATA6
POU2F1..3.p2	-3.364	POU2F2 POU2F1 POU2F3
NFKB1_REL_RELA.p2	-3.521	RELA REL NFKB1
EP300.p2	-3.626	EP300
PITX1..3.p2	-3.666	PITX2 PITX3 PITX1
YY1.p2	-4.063	YY1
NFY{A,B,C}.p2	-4.146	NFYC NFYB NFYA
SPI1.p2	-4.271	SPI1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.352	ARNT MAX MYC USF1 BHLHB2 ARNT2
TFDP1.p2	-4.685	TFDP1
AAGGCAC	-4.876
ELF1,2,4.p2	-5.059	ELF2 ELF1 ELF4
E2F1..5.p2	-6.341	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: GNF_1_PrefrontalCortex

Sorted z-values for every WM.