ISMARA results: GNF_1

Sample name: GNF_1_Prostate

Sorted Z-values histogram for the sample GNF_1_Prostate

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
TBP.p2	6.874	TBP
UUUUUGC	5.472
NR5A1,2.p2	4.634	NR5A1 NR5A2
SRF.p3	4.613	SRF
MEF2{A,B,C,D}.p2	4.098	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TFAP2{A,C}.p2	3.960	TFAP2C TFAP2A
CUCCCAA	3.517
POU2F1..3.p2	3.425	POU2F2 POU2F1 POU2F3
ESR1.p2	3.417	ESR1
AAGGCAC	3.403
FOX{D1,D2}.p2	3.356	FOXD2 FOXD1
HIC1.p2	3.346	HIC1
MAZ.p2	3.102	MAZ
GUAGUGU	3.092
EGR1..3.p2	2.824	EGR3 EGR1 EGR2
SNAI1..3.p2	2.812	SNAI2 SNAI1 SNAI3
PPARG.p2	2.728	PPARG
HBP1_HMGB_SSRP1_UBTF.p2	2.559	HMGB2 HMGB3 SSRP1 UBTF HBP1
PRDM1.p3	2.538	PRDM1
TGIF1.p2	2.374	TGIF1
FOXA2.p3	2.357	FOXA2
NKX6-1,2.p2	2.357	NKX6-1 NKX6-2
NHLH1,2.p2	2.319	NHLH1 NHLH2
MYFfamily.p2	2.284	MYOD1 MYF6 MYF5 MYOG
ZNF384.p2	2.265	ZNF384
NFIX.p2	2.239	NFIX
STAT2,4,6.p2	2.229	STAT2 STAT4 STAT6
FOX{C1,C2}.p2	2.142	FOXC1 FOXC2
TFAP2B.p2	2.116	TFAP2B
TEAD1.p2	2.095	TEAD1 TEAD2 TEAD3 TEAD4
BACH2.p2	1.894	BACH2
CUUUGGU	1.862
TLX1..3_NFIC{dimer}.p2	1.857	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
TFAP4.p2	1.850	TFAP4
RORA.p2	1.817	RORA
ZBTB6.p2	1.788	ZBTB6
ATF6.p2	1.743	ATF6
NANOG{mouse}.p2	1.708	NANOG
SP1.p2	1.693	SP1
ZFP161.p2	1.689	ZFP161
TFEB.p2	1.674	TFEB
UAAUGCU	1.641
DBP.p2	1.609	DBP
ZEB1.p2	1.574	ZEB1
NR6A1.p2	1.552	NR6A1
AUGGCAC	1.482
GLI1..3.p2	1.461	GLI1 GLI2 GLI3
MAFB.p2	1.459	MAFB
AUUGCAC	1.424
UUGGCAA	1.409
ATF4.p2	1.388	ATF4
GAUUGUC	1.384
SMAD1..7,9.p2	1.344	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GFI1B.p2	1.342	GFI1B
CDX1,2,4.p2	1.340	CDX1 CDX2 CDX4
EP300.p2	1.282	EP300
AAGUGCU	1.282
KLF12.p2	1.272	KLF12
GUGCAAA	1.265
FOX{F1,F2,J1}.p2	1.237	FOXF2 FOXJ1 FOXF1
UUGUUCG	1.230
XBP1.p3	1.215	XBP1
HOX{A6,A7,B6,B7}.p2	1.206	HOXB6 HOXA7 HOXB7 HOXA6
TCF4_dimer.p2	1.150	TCF4
TFCP2.p2	1.149	TFCP2
EVI1.p2	1.115	EVI1
POU1F1.p2	1.114	POU1F1
GGACGGA	1.090
ATF2.p2	1.068	ATF2
GATA1..3.p2	1.065	GATA1 GATA2 GATA3
VSX1,2.p2	1.061	VSX2 VSX1
CREB1.p2	1.054	CREB1
NFE2L1.p2	1.022	NFE2L1
AR.p2	0.986	AR
AACCUGG	0.985
GUAACAG	0.962
CEBPA,B_DDIT3.p2	0.950	DDIT3 CEBPA CEBPB
FOSL2.p2	0.939	FOSL2
GATA6.p2	0.897	GATA6
UGCAUAG	0.891
RXRA_VDR{dimer}.p2	0.889	VDR	$logo of RXRA_VDR{dimer}.p2$
GCUACAU	0.857
SREBF1,2.p2	0.820	SREBF1 SREBF2
HSF1,2.p2	0.764	HSF1 HSF2
AAGGUGC	0.754
MTF1.p2	0.749	MTF1
ACAGUAU	0.743
CAGCAGG	0.703
CCAGUGU	0.697
AAUGCCC	0.679
POU6F1.p2	0.670	POU6F1
NR3C1.p2	0.669	NR3C1
POU3F1..4.p2	0.657	POU3F1 POU3F3 POU3F2 POU3F4
GTF2A1,2.p2	0.648	GTF2A1 GTF2A2
FOXO1,3,4.p2	0.635	FOXO1 FOXO4 FOXO3
ONECUT1,2.p2	0.599	ONECUT2 ONECUT1
AUGUGCC	0.596
GGAAUGU	0.552
UGAAAUG	0.527
NFKB1_REL_RELA.p2	0.521	RELA REL NFKB1
AGCUUAU	0.505
GGCAGUG	0.502
GGAAGAC	0.480
EN1,2.p2	0.462	EN1 EN2
ACAGUAC	0.456
TAL1_TCF{3,4,12}.p2	0.437	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AIRE.p2	0.428	AIRE
GAUCAGA	0.423
POU5F1_SOX2{dimer}.p2	0.370	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
SPZ1.p2	0.354	SPZ1
MSX1,2.p2	0.348	MSX1 MSX2
CDC5L.p2	0.347	CDC5L
NFATC1..3.p2	0.347	NFATC3 NFATC2 NFATC1
PAX5.p2	0.343	PAX5
RBPJ.p2	0.325	RBPJ
HMGA1,2.p2	0.319	HMGA1 HMGA2
UAAGACU	0.306
HAND1,2.p2	0.306	HAND1 HAND2
AGCAGCG	0.294
CGUGUCU	0.255
SOX{8,9,10}.p2	0.241	SOX9 SOX8 SOX10
EOMES.p2	0.234	EOMES
AGUGCAA	0.224
LMO2.p2	0.205	LMO2
AAUCUCA	0.200
NANOG.p2	0.197	NANOG
RXRG_dimer.p3	0.194	NR1H2 RXRA PPARG PPARA RXRB RXRG
HNF1A.p2	0.169	HNF1A
PATZ1.p2	0.165	PATZ1
FOS_FOS{B,L1}_JUN{B,D}.p2	0.154	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
HOX{A5,B5}.p2	0.153	HOXB5 HOXA5
TP53.p2	0.131	TP53
EHF.p2	0.124	EHF
PAX8.p2	0.093	PAX8
HOX{A4,D4}.p2	0.091	HOXA4 HOXD4
TLX2.p2	0.073	TLX2
GAUAUGU	0.071
UGUGCGU	0.065
GAGAACU	0.062
UCACAUU	0.053
ACCCGUA	0.042
HMX1.p2	0.018	HMX1
UGACCUA	0.007
ACUGCAU	0.006
CCAGCAU	-0.008
STAT1,3.p3	-0.011	STAT1 STAT3
GGCAAGA	-0.023
UCCAGUU	-0.035
AAUCUCU	-0.041
LEF1_TCF7_TCF7L1,2.p2	-0.042	TCF7 TCF7L2 LEF1 TCF7L1
ATF5_CREB3.p2	-0.054	ATF5 CREB3
GGAGUGU	-0.056
NKX3-2.p2	-0.059	NKX3-2
ARID5B.p2	-0.063	ARID5B
AGGUAGU	-0.072
HOXA9_MEIS1.p2	-0.072	MEIS1 HOXA9
AGCAGCA	-0.079
EWSR1-FLI1.p2	-0.084	FLI1 EWSR1
AACCGUU	-0.102
FOXQ1.p2	-0.111	FOXQ1
ZNF423.p2	-0.112	ZNF423
SRY.p2	-0.118	SRY
UUGGCAC	-0.136
MYOD1.p2	-0.138	MYOD1
GZF1.p2	-0.141	GZF1
ACUGGCC	-0.142
FOXP3.p2	-0.191	FOXP3
CGUACCG	-0.221
AAAGUGC	-0.238
FOXD3.p2	-0.255	FOXD3
PAX3,7.p2	-0.291	PAX7 PAX3
CACAGUG	-0.294
RREB1.p2	-0.316	RREB1
PBX1.p2	-0.319	PBX1
ZNF238.p2	-0.323	ZNF238
CTCF.p2	-0.347	CTCF
BPTF.p2	-0.352	BPTF
RFX1..5_RFXANK_RFXAP.p2	-0.362	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AGUGGUU	-0.369
AACGGAA	-0.390
HNF4A_NR2F1,2.p2	-0.400	NR2F1 NR2F2 HNF4A
UAUUGCU	-0.430
NR1H4.p2	-0.437	NR1H4
EBF1.p2	-0.438	EBF1
CUACAGU	-0.438
LHX3,4.p2	-0.446	LHX3 LHX4
NFIL3.p2	-0.447	NFIL3
AUGGCUU	-0.448
RXR{A,B,G}.p2	-0.459	RXRA RXRB RXRG
GAGAUGA	-0.469
ZNF148.p2	-0.477	ZNF148
UCCCUUU	-0.483
GUAAACA	-0.492
PAX6.p2	-0.541	PAX6
UAAGACG	-0.554
FOX{I1,J2}.p2	-0.557	FOXI1 FOXJ2
CCUUCAU	-0.560
POU5F1.p2	-0.567	POU5F1
TBX4,5.p2	-0.577	TBX5 TBX4
NKX2-1,4.p2	-0.590	NKX2-1 NKX2-4
IRF1,2,7.p3	-0.610	IRF1 IRF2 IRF7
CCCUGAG	-0.614
ACAUUCA	-0.631
SOX17.p2	-0.644	SOX17
GGCUCAG	-0.644
FOXN1.p2	-0.654	FOXN1
ADNP_IRX_SIX_ZHX.p2	-0.667	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ALX1.p2	-0.671	ALX1
GAGGUAG	-0.675
NKX3-1.p2	-0.689	NKX3-1
AUGACAC	-0.704
UGCAUUG	-0.711
UUGGUCC	-0.713
NKX2-3_NKX2-5.p2	-0.733	NKX2-5 NKX2-3
CRX.p2	-0.738	CRX
ETS1,2.p2	-0.754	ETS2 ETS1
AAUACUG	-0.813
SOX2.p2	-0.821	SOX2
FOXL1.p2	-0.833	FOXL1
PDX1.p2	-0.843	PDX1
REST.p3	-0.846	REST
PRRX1,2.p2	-0.869	PRRX2 PRRX1
ACCCUGU	-0.897
DMAP1_NCOR{1,2}_SMARC.p2	-0.959	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
T.p2	-0.962	T
JUN.p2	-0.977	JUN JUND JUNB
STAT5{A,B}.p2	-0.997	STAT5B STAT5A
UCACAGU	-1.003
HLF.p2	-1.037	HLF
RUNX1..3.p2	-1.038	RUNX1 RUNX3 RUNX2
HIF1A.p2	-1.053	HIF1A
SOX5.p2	-1.062	SOX5
SPIB.p2	-1.119	SPIB
MYBL2.p2	-1.144	MYBL2
PAX4.p2	-1.154	PAX4
AACAGUC	-1.165
MZF1.p2	-1.174	MZF1
GFI1.p2	-1.303	GFI1
NR4A2.p2	-1.331	NR4A2
GUCAGUU	-1.367
CUX2.p2	-1.421	CUX2
NKX2-2,8.p2	-1.517	NKX2-2 NKX2-8
NFY{A,B,C}.p2	-1.519	NFYC NFYB NFYA
ZIC1..3.p2	-1.546	ZIC1 ZIC2 ZIC3
FEV.p2	-1.632	FEV
IKZF2.p2	-1.634	IKZF2
PAX2.p2	-1.635	PAX2
GCUGGUG	-1.646
SPI1.p2	-1.725	SPI1
AHR_ARNT_ARNT2.p2	-1.796	ARNT AHR ARNT2
AGCACCA	-1.841
UCAAGUA	-1.912
CAGUGCA	-2.015
HES1.p2	-2.145	HES1
NFE2.p2	-2.148	NFE2
GTF2I.p2	-2.161	GTF2I
AACACUG	-2.440
AGCUGCC	-2.457
UGUGCUU	-2.494
ELF1,2,4.p2	-2.537	ELF2 ELF1 ELF4
KLF4.p3	-2.785	KLF4
bHLH_family.p2	-2.793	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ZBTB16.p2	-2.831	ZBTB16
GCAGCAU	-3.013
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.227	ARNT MAX MYC USF1 BHLHB2 ARNT2
PITX1..3.p2	-3.390	PITX2 PITX3 PITX1
ESRRA.p2	-3.463	ESRRA
IKZF1.p2	-3.581	IKZF1
NFE2L2.p2	-3.608	NFE2L2
ELK1,4_GABP{A,B1}.p3	-3.927	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
TFDP1.p2	-3.943	TFDP1
YY1.p2	-4.157	YY1
ZNF143.p2	-4.175	ZNF143
NRF1.p2	-4.404	NRF1
E2F1..5.p2	-4.905	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-6.700	MYB

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Sample name: GNF_1_Prostate

Sorted z-values for every WM.