ISMARA results: GNF_1_SkeletalMuscle

Sample name: GNF_1_SkeletalMuscle

Sorted Z-values histogram for the sample GNF_1_SkeletalMuscle

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	6.200
MEF2{A,B,C,D}.p2	5.860	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TGIF1.p2	5.201	TGIF1
RREB1.p2	4.730	RREB1
UUUUUGC	4.628
NR4A2.p2	4.483	NR4A2
SMAD1..7,9.p2	4.441	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TCF4_dimer.p2	4.392	TCF4
JUN.p2	3.924	JUN JUND JUNB
GATA6.p2	3.843	GATA6
SRF.p3	3.713	SRF
GAGGUAG	3.678
EVI1.p2	3.655	EVI1
GTF2A1,2.p2	3.501	GTF2A1 GTF2A2
EN1,2.p2	3.464	EN1 EN2
HNF4A_NR2F1,2.p2	3.356	NR2F1 NR2F2 HNF4A
KLF12.p2	3.287	KLF12
EBF1.p2	3.260	EBF1
MYOD1.p2	3.148	MYOD1
STAT1,3.p3	2.823	STAT1 STAT3
TLX1..3_NFIC{dimer}.p2	2.733	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ZNF423.p2	2.732	ZNF423
GTF2I.p2	2.691	GTF2I
RBPJ.p2	2.681	RBPJ
UGAAAUG	2.656
FOXA2.p3	2.640	FOXA2
NKX2-1,4.p2	2.602	NKX2-1 NKX2-4
TEAD1.p2	2.551	TEAD1 TEAD2 TEAD3 TEAD4
ZIC1..3.p2	2.511	ZIC1 ZIC2 ZIC3
HAND1,2.p2	2.469	HAND1 HAND2
MTF1.p2	2.453	MTF1
UCCCUUU	2.400
CCCUGAG	2.319
NR1H4.p2	2.242	NR1H4
MAZ.p2	2.179	MAZ
CACAGUG	2.167
SNAI1..3.p2	2.150	SNAI2 SNAI1 SNAI3
MYFfamily.p2	2.108	MYOD1 MYF6 MYF5 MYOG
ALX1.p2	2.087	ALX1
HLF.p2	2.059	HLF
HNF1A.p2	2.023	HNF1A
NR3C1.p2	1.963	NR3C1
FOXP3.p2	1.960	FOXP3
GGCAGUG	1.950
REST.p3	1.946	REST
NANOG{mouse}.p2	1.909	NANOG
RFX1..5_RFXANK_RFXAP.p2	1.875	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
NHLH1,2.p2	1.851	NHLH1 NHLH2
UGUGCUU	1.849
TBX4,5.p2	1.831	TBX5 TBX4
NR5A1,2.p2	1.810	NR5A1 NR5A2
GUAAACA	1.806
FEV.p2	1.663	FEV
UUGUUCG	1.636
POU2F1..3.p2	1.630	POU2F2 POU2F1 POU2F3
RXRA_VDR{dimer}.p2	1.572	VDR	$logo of RXRA_VDR{dimer}.p2$
RORA.p2	1.572	RORA
TFAP2{A,C}.p2	1.560	TFAP2C TFAP2A
TLX2.p2	1.556	TLX2
FOX{F1,F2,J1}.p2	1.502	FOXF2 FOXJ1 FOXF1
POU1F1.p2	1.464	POU1F1
AUGGCUU	1.424
STAT2,4,6.p2	1.422	STAT2 STAT4 STAT6
FOX{C1,C2}.p2	1.369	FOXC1 FOXC2
GGCUCAG	1.331
UAUUGCU	1.307
NFKB1_REL_RELA.p2	1.291	RELA REL NFKB1
NKX2-3_NKX2-5.p2	1.273	NKX2-5 NKX2-3
ACCCUGU	1.272
UGCAUAG	1.251
HMX1.p2	1.239	HMX1
IKZF2.p2	1.229	IKZF2
ATF6.p2	1.220	ATF6
GGAAGAC	1.204
IKZF1.p2	1.195	IKZF1
EOMES.p2	1.158	EOMES
FOX{I1,J2}.p2	1.145	FOXI1 FOXJ2
AAAGUGC	1.134
HSF1,2.p2	1.117	HSF1 HSF2
LEF1_TCF7_TCF7L1,2.p2	1.114	TCF7 TCF7L2 LEF1 TCF7L1
HIC1.p2	1.066	HIC1
NANOG.p2	1.024	NANOG
AIRE.p2	1.024	AIRE
HOXA9_MEIS1.p2	1.019	MEIS1 HOXA9
ETS1,2.p2	0.982	ETS2 ETS1
CAGCAGG	0.961
GFI1B.p2	0.956	GFI1B
AGCAGCA	0.951
GAGAUGA	0.925
AUGACAC	0.911
PPARG.p2	0.910	PPARG
GAGAACU	0.903
RXR{A,B,G}.p2	0.849	RXRA RXRB RXRG
GATA1..3.p2	0.840	GATA1 GATA2 GATA3
POU6F1.p2	0.834	POU6F1
GAUCAGA	0.830
AAGUGCU	0.830
FOS_FOS{B,L1}_JUN{B,D}.p2	0.793	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
PAX6.p2	0.792	PAX6
PAX2.p2	0.787	PAX2
AR.p2	0.757	AR
HOX{A5,B5}.p2	0.751	HOXB5 HOXA5
NFIL3.p2	0.747	NFIL3
NFIX.p2	0.733	NFIX
FOXL1.p2	0.716	FOXL1
AGCUGCC	0.701
MZF1.p2	0.669	MZF1
AAGGCAC	0.668
CCAGCAU	0.661
CDC5L.p2	0.639	CDC5L
MYBL2.p2	0.638	MYBL2
NFE2L2.p2	0.573	NFE2L2
HBP1_HMGB_SSRP1_UBTF.p2	0.571	HMGB2 HMGB3 SSRP1 UBTF HBP1
ARID5B.p2	0.563	ARID5B
UCAAGUA	0.549
POU5F1_SOX2{dimer}.p2	0.542	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
HMGA1,2.p2	0.528	HMGA1 HMGA2
ZBTB6.p2	0.506	ZBTB6
AGUGCAA	0.457
AACACUG	0.454
CGUGUCU	0.449
PAX8.p2	0.447	PAX8
GLI1..3.p2	0.446	GLI1 GLI2 GLI3
VSX1,2.p2	0.442	VSX2 VSX1
FOXO1,3,4.p2	0.428	FOXO1 FOXO4 FOXO3
POU3F1..4.p2	0.405	POU3F1 POU3F3 POU3F2 POU3F4
ZNF384.p2	0.395	ZNF384
ZNF238.p2	0.389	ZNF238
AAUGCCC	0.375
PDX1.p2	0.364	PDX1
UGCAUUG	0.363
GGAGUGU	0.343
RUNX1..3.p2	0.334	RUNX1 RUNX3 RUNX2
DBP.p2	0.330	DBP
AAUCUCU	0.326
ZEB1.p2	0.314	ZEB1
AGCUUAU	0.302
UAAGACU	0.290
SRY.p2	0.286	SRY
FOSL2.p2	0.286	FOSL2
CUUUGGU	0.285
GGACGGA	0.237
UAAUGCU	0.217
AACGGAA	0.199
PRRX1,2.p2	0.169	PRRX2 PRRX1
UGACCUA	0.167
PAX3,7.p2	0.151	PAX7 PAX3
NR6A1.p2	0.137	NR6A1
LHX3,4.p2	0.110	LHX3 LHX4
AUGUGCC	0.103
CEBPA,B_DDIT3.p2	0.093	DDIT3 CEBPA CEBPB
HOX{A6,A7,B6,B7}.p2	0.078	HOXB6 HOXA7 HOXB7 HOXA6
AAUCUCA	0.071
UGUGCGU	0.044
GGCAAGA	-0.007
AGCACCA	-0.011
TFCP2.p2	-0.012	TFCP2
ACCCGUA	-0.016
POU5F1.p2	-0.024	POU5F1
GAUUGUC	-0.028
GZF1.p2	-0.051	GZF1
CCAGUGU	-0.052
CUACAGU	-0.062
TAL1_TCF{3,4,12}.p2	-0.071	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GAUAUGU	-0.072
GUCAGUU	-0.075
CCUUCAU	-0.116
TFAP4.p2	-0.117	TFAP4
CGUACCG	-0.123
GCAGCAU	-0.142
ESR1.p2	-0.157	ESR1
ONECUT1,2.p2	-0.173	ONECUT2 ONECUT1
TBP.p2	-0.193	TBP
ACAUUCA	-0.205
DMAP1_NCOR{1,2}_SMARC.p2	-0.210	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AGCAGCG	-0.214
FOX{D1,D2}.p2	-0.271	FOXD2 FOXD1
UAAGACG	-0.282
AACAGUC	-0.284
MSX1,2.p2	-0.286	MSX1 MSX2
CTCF.p2	-0.294	CTCF
AAUACUG	-0.306
AACCUGG	-0.323
SOX5.p2	-0.344	SOX5
CRX.p2	-0.357	CRX
ACUGCAU	-0.358
EGR1..3.p2	-0.371	EGR3 EGR1 EGR2
HES1.p2	-0.377	HES1
UCACAGU	-0.410
AAGGUGC	-0.413
CUX2.p2	-0.417	CUX2
STAT5{A,B}.p2	-0.417	STAT5B STAT5A
CAGUGCA	-0.467
SPZ1.p2	-0.470	SPZ1
PITX1..3.p2	-0.470	PITX2 PITX3 PITX1
PATZ1.p2	-0.482	PATZ1
AUGGCAC	-0.509
GUAACAG	-0.514
NKX6-1,2.p2	-0.540	NKX6-1 NKX6-2
AGGUAGU	-0.550
CDX1,2,4.p2	-0.554	CDX1 CDX2 CDX4
TFEB.p2	-0.572	TFEB
AHR_ARNT_ARNT2.p2	-0.574	ARNT AHR ARNT2
UUGGCAC	-0.581
ZBTB16.p2	-0.584	ZBTB16
ACUGGCC	-0.587
PRDM1.p3	-0.602	PRDM1
ADNP_IRX_SIX_ZHX.p2	-0.607	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
SOX2.p2	-0.625	SOX2
EP300.p2	-0.645	EP300
AACCGUU	-0.647
GCUACAU	-0.661
FOXQ1.p2	-0.682	FOXQ1
SOX{8,9,10}.p2	-0.728	SOX9 SOX8 SOX10
NFE2L1.p2	-0.728	NFE2L1
ZFP161.p2	-0.831	ZFP161
HOX{A4,D4}.p2	-0.837	HOXA4 HOXD4
UCCAGUU	-0.838
T.p2	-0.888	T
UUGGCAA	-0.970
GFI1.p2	-0.993	GFI1
PAX5.p2	-1.032	PAX5
AUUGCAC	-1.042
BPTF.p2	-1.071	BPTF
ACAGUAU	-1.106
IRF1,2,7.p3	-1.155	IRF1 IRF2 IRF7
ACAGUAC	-1.172
TFAP2B.p2	-1.192	TFAP2B
EWSR1-FLI1.p2	-1.228	FLI1 EWSR1
PAX4.p2	-1.249	PAX4
GUAGUGU	-1.263
SPI1.p2	-1.304	SPI1
CREB1.p2	-1.309	CREB1
GCUGGUG	-1.352
NKX3-1.p2	-1.410	NKX3-1
LMO2.p2	-1.417	LMO2
GUGCAAA	-1.453
UUGGUCC	-1.635
SREBF1,2.p2	-1.644	SREBF1 SREBF2
UCACAUU	-1.645
PBX1.p2	-1.655	PBX1
FOXD3.p2	-1.705	FOXD3
ATF2.p2	-1.776	ATF2
AGUGGUU	-1.844
NFE2.p2	-1.864	NFE2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.884	ARNT MAX MYC USF1 BHLHB2 ARNT2
bHLH_family.p2	-1.914	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NKX3-2.p2	-1.952	NKX3-2
SP1.p2	-1.997	SP1
NFATC1..3.p2	-2.191	NFATC3 NFATC2 NFATC1
NKX2-2,8.p2	-2.195	NKX2-2 NKX2-8
ESRRA.p2	-2.273	ESRRA
FOXN1.p2	-2.385	FOXN1
SOX17.p2	-2.405	SOX17
ZNF148.p2	-2.559	ZNF148
MAFB.p2	-2.639	MAFB
TP53.p2	-2.662	TP53
KLF4.p3	-2.894	KLF4
SPIB.p2	-2.918	SPIB
RXRG_dimer.p3	-3.216	NR1H2 RXRA PPARG PPARA RXRB RXRG
ZNF143.p2	-3.254	ZNF143
HIF1A.p2	-3.464	HIF1A
BACH2.p2	-3.502	BACH2
E2F1..5.p2	-3.508	E2F4 E2F5 E2F2 E2F1 E2F3
ATF4.p2	-3.915	ATF4
NFY{A,B,C}.p2	-4.260	NFYC NFYB NFYA
EHF.p2	-4.340	EHF
ATF5_CREB3.p2	-4.851	ATF5 CREB3
XBP1.p3	-5.224	XBP1
TFDP1.p2	-5.268	TFDP1
MYB.p2	-5.912	MYB
ELK1,4_GABP{A,B1}.p3	-6.028	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ELF1,2,4.p2	-6.185	ELF2 ELF1 ELF4
GGAAUGU	-7.244
YY1.p2	-10.053	YY1
NRF1.p2	-10.254	NRF1

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Sample name: GNF_1_SkeletalMuscle

Sorted z-values for every WM.