ISMARA results: GNF_1_TestisGermCell

Sample name: GNF_1_TestisGermCell

Sorted Z-values histogram for the sample GNF_1_TestisGermCell

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
MYB.p2	23.256	MYB
RFX1..5_RFXANK_RFXAP.p2	8.877	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
NRF1.p2	5.998	NRF1
PITX1..3.p2	4.680	PITX2 PITX3 PITX1
JUN.p2	3.691	JUN JUND JUNB
TFAP2{A,C}.p2	3.197	TFAP2C TFAP2A
KLF12.p2	3.160	KLF12
ELK1,4_GABP{A,B1}.p3	3.000	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
RBPJ.p2	2.959	RBPJ
CUCCCAA	2.906
ALX1.p2	2.378	ALX1
RXR{A,B,G}.p2	2.369	RXRA RXRB RXRG
PAX5.p2	2.112	PAX5
ATF6.p2	2.037	ATF6
LMO2.p2	1.972	LMO2
POU6F1.p2	1.880	POU6F1
SRF.p3	1.846	SRF
ZNF143.p2	1.840	ZNF143
AGCACCA	1.828
IKZF2.p2	1.817	IKZF2
EN1,2.p2	1.798	EN1 EN2
CAGUGCA	1.743
FOXN1.p2	1.638	FOXN1
HLF.p2	1.637	HLF
TBX4,5.p2	1.541	TBX5 TBX4
GGCUCAG	1.507
NKX2-1,4.p2	1.478	NKX2-1 NKX2-4
TCF4_dimer.p2	1.470	TCF4
AAAGUGC	1.413
CDX1,2,4.p2	1.402	CDX1 CDX2 CDX4
FOXQ1.p2	1.361	FOXQ1
MZF1.p2	1.304	MZF1
HAND1,2.p2	1.290	HAND1 HAND2
RXRA_VDR{dimer}.p2	1.273	VDR	$logo of RXRA_VDR{dimer}.p2$
NFIL3.p2	1.268	NFIL3
UAAUGCU	1.240
GAUUGUC	1.209
FOX{C1,C2}.p2	1.165	FOXC1 FOXC2
EVI1.p2	1.143	EVI1
ZIC1..3.p2	1.127	ZIC1 ZIC2 ZIC3
KLF4.p3	1.127	KLF4
CREB1.p2	1.100	CREB1
UUGUUCG	1.075
STAT1,3.p3	1.061	STAT1 STAT3
SOX2.p2	1.059	SOX2
NKX2-3_NKX2-5.p2	0.956	NKX2-5 NKX2-3
HOX{A5,B5}.p2	0.942	HOXB5 HOXA5
MYBL2.p2	0.932	MYBL2
FOXO1,3,4.p2	0.878	FOXO1 FOXO4 FOXO3
AGCUGCC	0.859
SOX5.p2	0.859	SOX5
GGCAAGA	0.857
UAAGACU	0.816
NR1H4.p2	0.813	NR1H4
NANOG.p2	0.796	NANOG
NKX2-2,8.p2	0.795	NKX2-2 NKX2-8
PBX1.p2	0.784	PBX1
ONECUT1,2.p2	0.757	ONECUT2 ONECUT1
FOXP3.p2	0.756	FOXP3
MAZ.p2	0.744	MAZ
GATA6.p2	0.741	GATA6
AGCAGCA	0.736
UAUUGCU	0.697
GUGCAAA	0.670
EGR1..3.p2	0.663	EGR3 EGR1 EGR2
NKX6-1,2.p2	0.643	NKX6-1 NKX6-2
DBP.p2	0.603	DBP
CRX.p2	0.591	CRX
T.p2	0.574	T
UUGGCAA	0.561
TFDP1.p2	0.555	TFDP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	0.553	ARNT MAX MYC USF1 BHLHB2 ARNT2
ACAUUCA	0.544
UAAGACG	0.523
ACAGUAU	0.513
ARID5B.p2	0.498	ARID5B
CGUACCG	0.490
GUAACAG	0.480
ZBTB16.p2	0.479	ZBTB16
NFE2L2.p2	0.454	NFE2L2
AGCUUAU	0.448
POU1F1.p2	0.438	POU1F1
UUUUUGC	0.431
FOX{F1,F2,J1}.p2	0.417	FOXF2 FOXJ1 FOXF1
RORA.p2	0.416	RORA
AAGGUGC	0.411
MYOD1.p2	0.408	MYOD1
EHF.p2	0.404	EHF
RXRG_dimer.p3	0.375	NR1H2 RXRA PPARG PPARA RXRB RXRG
PAX2.p2	0.372	PAX2
ZNF384.p2	0.368	ZNF384
HBP1_HMGB_SSRP1_UBTF.p2	0.366	HMGB2 HMGB3 SSRP1 UBTF HBP1
HES1.p2	0.345	HES1
LEF1_TCF7_TCF7L1,2.p2	0.337	TCF7 TCF7L2 LEF1 TCF7L1
PATZ1.p2	0.334	PATZ1
GAGAACU	0.333
AUGGCUU	0.331
ACCCUGU	0.313
HIC1.p2	0.312	HIC1
SNAI1..3.p2	0.303	SNAI2 SNAI1 SNAI3
POU3F1..4.p2	0.267	POU3F1 POU3F3 POU3F2 POU3F4
SREBF1,2.p2	0.265	SREBF1 SREBF2
ACAGUAC	0.255
CACAGUG	0.252
GUAAACA	0.230
ZNF423.p2	0.209	ZNF423
AUGUGCC	0.162
CCAGUGU	0.153
GCUGGUG	0.145
SMAD1..7,9.p2	0.144	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TFAP4.p2	0.140	TFAP4
UGUGCGU	0.123
SPZ1.p2	0.122	SPZ1
RREB1.p2	0.112	RREB1
MEF2{A,B,C,D}.p2	0.106	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TEAD1.p2	0.104	TEAD1 TEAD2 TEAD3 TEAD4
HNF1A.p2	0.063	HNF1A
GZF1.p2	0.029	GZF1
SRY.p2	0.021	SRY
ACCCGUA	0.014
UGCAUUG	0.013
AGCAGCG	-0.002
ACUGCAU	-0.028
HSF1,2.p2	-0.028	HSF1 HSF2
UCAAGUA	-0.054
NANOG{mouse}.p2	-0.060	NANOG
AAUCUCU	-0.063
HOX{A4,D4}.p2	-0.069	HOXA4 HOXD4
PAX6.p2	-0.085	PAX6
CGUGUCU	-0.087
PAX4.p2	-0.095	PAX4
NR3C1.p2	-0.104	NR3C1
NR5A1,2.p2	-0.105	NR5A1 NR5A2
VSX1,2.p2	-0.112	VSX2 VSX1
HOXA9_MEIS1.p2	-0.122	MEIS1 HOXA9
FEV.p2	-0.144	FEV
AACCGUU	-0.145
GAUAUGU	-0.160
FOX{D1,D2}.p2	-0.160	FOXD2 FOXD1
CDC5L.p2	-0.162	CDC5L
HMGA1,2.p2	-0.162	HMGA1 HMGA2
GAGGUAG	-0.171
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.173	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ACUGGCC	-0.177
GAUCAGA	-0.191
GCUACAU	-0.194
PAX3,7.p2	-0.196	PAX7 PAX3
AGGUAGU	-0.208
SOX17.p2	-0.229	SOX17
GAGAUGA	-0.237
UCACAGU	-0.238
PAX8.p2	-0.244	PAX8
AIRE.p2	-0.246	AIRE
GGACGGA	-0.250
CUACAGU	-0.265
E2F1..5.p2	-0.291	E2F4 E2F5 E2F2 E2F1 E2F3
TFCP2.p2	-0.297	TFCP2
NKX3-1.p2	-0.297	NKX3-1
UGACCUA	-0.324
MSX1,2.p2	-0.336	MSX1 MSX2
AUGACAC	-0.347
PDX1.p2	-0.353	PDX1
NFY{A,B,C}.p2	-0.357	NFYC NFYB NFYA
GUCAGUU	-0.424
AACCUGG	-0.431
SOX{8,9,10}.p2	-0.485	SOX9 SOX8 SOX10
UGUGCUU	-0.486
GUAGUGU	-0.488
CUUUGGU	-0.496
AUUGCAC	-0.496
CAGCAGG	-0.498
CCUUCAU	-0.546
GFI1.p2	-0.547	GFI1
AAUCUCA	-0.549
AACAGUC	-0.574
EOMES.p2	-0.588	EOMES
STAT5{A,B}.p2	-0.601	STAT5B STAT5A
ATF2.p2	-0.609	ATF2
REST.p3	-0.609	REST
AACGGAA	-0.619
MAFB.p2	-0.630	MAFB
FOX{I1,J2}.p2	-0.654	FOXI1 FOXJ2
UUGGUCC	-0.661
LHX3,4.p2	-0.674	LHX3 LHX4
NR6A1.p2	-0.687	NR6A1
AGUGCAA	-0.695
AACACUG	-0.770
UGCAUAG	-0.786
TAL1_TCF{3,4,12}.p2	-0.791	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
ZBTB6.p2	-0.793	ZBTB6
EWSR1-FLI1.p2	-0.815	FLI1 EWSR1
AAUACUG	-0.815
TGIF1.p2	-0.852	TGIF1
NFKB1_REL_RELA.p2	-0.856	RELA REL NFKB1
GATA1..3.p2	-0.862	GATA1 GATA2 GATA3
UCACAUU	-0.871
CUX2.p2	-0.879	CUX2
FOSL2.p2	-0.892	FOSL2
FOXL1.p2	-0.910	FOXL1
CCAGCAU	-0.943
DMAP1_NCOR{1,2}_SMARC.p2	-0.958	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
NFE2L1.p2	-0.960	NFE2L1
GGAGUGU	-0.963
HOX{A6,A7,B6,B7}.p2	-1.013	HOXB6 HOXA7 HOXB7 HOXA6
AAGUGCU	-1.023
ADNP_IRX_SIX_ZHX.p2	-1.035	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UGAAAUG	-1.039
AUGGCAC	-1.072
RUNX1..3.p2	-1.073	RUNX1 RUNX3 RUNX2
GTF2A1,2.p2	-1.085	GTF2A1 GTF2A2
AR.p2	-1.112	AR
EBF1.p2	-1.125	EBF1
UUGGCAC	-1.159
POU5F1_SOX2{dimer}.p2	-1.204	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NFATC1..3.p2	-1.211	NFATC3 NFATC2 NFATC1
NHLH1,2.p2	-1.222	NHLH1 NHLH2
SP1.p2	-1.230	SP1
YY1.p2	-1.234	YY1
AAUGCCC	-1.365
POU2F1..3.p2	-1.378	POU2F2 POU2F1 POU2F3
NFE2.p2	-1.393	NFE2
UCCCUUU	-1.406
BPTF.p2	-1.431	BPTF
GGAAGAC	-1.434
AGUGGUU	-1.454
UCCAGUU	-1.458
TLX2.p2	-1.511	TLX2
CEBPA,B_DDIT3.p2	-1.518	DDIT3 CEBPA CEBPB
GLI1..3.p2	-1.553	GLI1 GLI2 GLI3
ZNF148.p2	-1.568	ZNF148
AAGGCAC	-1.635
POU5F1.p2	-1.663	POU5F1
HIF1A.p2	-1.696	HIF1A
ATF5_CREB3.p2	-1.698	ATF5 CREB3
FOXA2.p3	-1.718	FOXA2
CTCF.p2	-1.817	CTCF
NFIX.p2	-1.843	NFIX
PPARG.p2	-1.849	PPARG
CCCUGAG	-1.874
ESR1.p2	-1.941	ESR1
ZNF238.p2	-1.954	ZNF238
MTF1.p2	-2.014	MTF1
TLX1..3_NFIC{dimer}.p2	-2.033	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
GCAGCAU	-2.067
FOXD3.p2	-2.081	FOXD3
GFI1B.p2	-2.094	GFI1B
BACH2.p2	-2.102	BACH2
NR4A2.p2	-2.121	NR4A2
PRDM1.p3	-2.135	PRDM1
EP300.p2	-2.136	EP300
GGCAGUG	-2.138
PRRX1,2.p2	-2.183	PRRX2 PRRX1
ESRRA.p2	-2.204	ESRRA
XBP1.p3	-2.255	XBP1
TBP.p2	-2.272	TBP
TFAP2B.p2	-2.302	TFAP2B
IKZF1.p2	-2.339	IKZF1
ZFP161.p2	-2.346	ZFP161
HMX1.p2	-2.355	HMX1
TFEB.p2	-2.359	TFEB
GGAAUGU	-2.539
MYFfamily.p2	-2.590	MYOD1 MYF6 MYF5 MYOG
NKX3-2.p2	-2.611	NKX3-2
ETS1,2.p2	-2.737	ETS2 ETS1
GTF2I.p2	-2.936	GTF2I
ATF4.p2	-2.964	ATF4
HNF4A_NR2F1,2.p2	-2.994	NR2F1 NR2F2 HNF4A
TP53.p2	-3.020	TP53
ZEB1.p2	-3.150	ZEB1
SPIB.p2	-3.485	SPIB
STAT2,4,6.p2	-3.571	STAT2 STAT4 STAT6
bHLH_family.p2	-3.691	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SPI1.p2	-3.917	SPI1
IRF1,2,7.p3	-4.298	IRF1 IRF2 IRF7
ELF1,2,4.p2	-4.506	ELF2 ELF1 ELF4
AHR_ARNT_ARNT2.p2	-5.308	ARNT AHR ARNT2

ISMARA

Project

Navigation

Downloads

Sample name: GNF_1_TestisGermCell

Sorted z-values for every WM.