ISMARA results: GNF_1_TrigeminalGanglion

Sample name: GNF_1_TrigeminalGanglion

Sorted Z-values histogram for the sample GNF_1_TrigeminalGanglion

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
UUUUUGC	9.457
CUCCCAA	9.389
TLX1..3_NFIC{dimer}.p2	4.963	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
GTF2A1,2.p2	4.114	GTF2A1 GTF2A2
MTF1.p2	3.961	MTF1
SMAD1..7,9.p2	3.857	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HIC1.p2	3.746	HIC1
MYFfamily.p2	3.711	MYOD1 MYF6 MYF5 MYOG
KLF12.p2	3.547	KLF12
EVI1.p2	3.510	EVI1
GTF2I.p2	3.373	GTF2I
UCCCUUU	3.352
JUN.p2	3.263	JUN JUND JUNB
POU1F1.p2	3.230	POU1F1
EBF1.p2	3.187	EBF1
RREB1.p2	3.171	RREB1
RFX1..5_RFXANK_RFXAP.p2	3.148	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
GATA6.p2	3.046	GATA6
GAGGUAG	3.021
LEF1_TCF7_TCF7L1,2.p2	2.847	TCF7 TCF7L2 LEF1 TCF7L1
TEAD1.p2	2.808	TEAD1 TEAD2 TEAD3 TEAD4
HNF1A.p2	2.740	HNF1A
NR1H4.p2	2.728	NR1H4
ZIC1..3.p2	2.655	ZIC1 ZIC2 ZIC3
SNAI1..3.p2	2.626	SNAI2 SNAI1 SNAI3
TGIF1.p2	2.623	TGIF1
STAT1,3.p3	2.621	STAT1 STAT3
EN1,2.p2	2.564	EN1 EN2
NANOG{mouse}.p2	2.535	NANOG
REST.p3	2.450	REST
RBPJ.p2	2.385	RBPJ
UGAAAUG	2.372
FOXP3.p2	2.333	FOXP3
TCF4_dimer.p2	2.323	TCF4
STAT2,4,6.p2	2.232	STAT2 STAT4 STAT6
MYOD1.p2	2.209	MYOD1
POU2F1..3.p2	2.206	POU2F2 POU2F1 POU2F3
MZF1.p2	2.136	MZF1
FOXA2.p3	2.113	FOXA2
NKX2-3_NKX2-5.p2	2.006	NKX2-5 NKX2-3
TFCP2.p2	1.931	TFCP2
SRY.p2	1.928	SRY
FEV.p2	1.924	FEV
NFATC1..3.p2	1.909	NFATC3 NFATC2 NFATC1
UGUGCUU	1.909
TBP.p2	1.875	TBP
HAND1,2.p2	1.828	HAND1 HAND2
NHLH1,2.p2	1.799	NHLH1 NHLH2
ALX1.p2	1.794	ALX1
AAAGUGC	1.725
ZNF238.p2	1.651	ZNF238
UGCAUAG	1.631
CCCUGAG	1.603
RUNX1..3.p2	1.592	RUNX1 RUNX3 RUNX2
GGCUCAG	1.555
UUGUUCG	1.554
TLX2.p2	1.552	TLX2
POU5F1.p2	1.544	POU5F1
TBX4,5.p2	1.494	TBX5 TBX4
ZNF384.p2	1.487	ZNF384
RXR{A,B,G}.p2	1.456	RXRA RXRB RXRG
GAGAUGA	1.451
AIRE.p2	1.446	AIRE
AGCACCA	1.412
FOX{D1,D2}.p2	1.410	FOXD2 FOXD1
GAGAACU	1.347
NKX2-1,4.p2	1.337	NKX2-1 NKX2-4
ATF6.p2	1.314	ATF6
ZEB1.p2	1.291	ZEB1
GGCAGUG	1.289
GUAAACA	1.271
GATA1..3.p2	1.226	GATA1 GATA2 GATA3
MAZ.p2	1.208	MAZ
AGCUGCC	1.205
HNF4A_NR2F1,2.p2	1.179	NR2F1 NR2F2 HNF4A
HMX1.p2	1.170	HMX1
AGCAGCA	1.152
HBP1_HMGB_SSRP1_UBTF.p2	1.135	HMGB2 HMGB3 SSRP1 UBTF HBP1
ETS1,2.p2	1.129	ETS2 ETS1
NFKB1_REL_RELA.p2	1.112	RELA REL NFKB1
SRF.p3	1.110	SRF
CACAGUG	1.103
NR3C1.p2	1.088	NR3C1
NFIL3.p2	1.032	NFIL3
POU3F1..4.p2	1.006	POU3F1 POU3F3 POU3F2 POU3F4
MSX1,2.p2	1.002	MSX1 MSX2
HLF.p2	0.999	HLF
PAX6.p2	0.992	PAX6
AAGUGCU	0.989
CCAGCAU	0.965
GAUCAGA	0.950
AACACUG	0.933
MEF2{A,B,C,D}.p2	0.930	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
IRF1,2,7.p3	0.925	IRF1 IRF2 IRF7
HSF1,2.p2	0.880	HSF1 HSF2
PAX2.p2	0.874	PAX2
AAUCUCU	0.856
PRRX1,2.p2	0.835	PRRX2 PRRX1
POU6F1.p2	0.831	POU6F1
CGUGUCU	0.822
PDX1.p2	0.816	PDX1
HMGA1,2.p2	0.769	HMGA1 HMGA2
TFAP4.p2	0.768	TFAP4
GUCAGUU	0.732
LHX3,4.p2	0.720	LHX3 LHX4
AGUGCAA	0.710
CDC5L.p2	0.706	CDC5L
ACCCUGU	0.704
FOX{C1,C2}.p2	0.700	FOXC1 FOXC2
EOMES.p2	0.677	EOMES
UCAAGUA	0.661
POU5F1_SOX2{dimer}.p2	0.633	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CDX1,2,4.p2	0.627	CDX1 CDX2 CDX4
ZNF423.p2	0.624	ZNF423
UCACAGU	0.621
MYBL2.p2	0.620	MYBL2
TAL1_TCF{3,4,12}.p2	0.614	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GGCAAGA	0.613
PPARG.p2	0.591	PPARG
CAGCAGG	0.590
RXRA_VDR{dimer}.p2	0.515	VDR	$logo of RXRA_VDR{dimer}.p2$
FOX{F1,F2,J1}.p2	0.502	FOXF2 FOXJ1 FOXF1
AGCAGCG	0.464
UAAGACU	0.459
AUGGCUU	0.456
IKZF1.p2	0.428	IKZF1
RORA.p2	0.425	RORA
FOS_FOS{B,L1}_JUN{B,D}.p2	0.384	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
HOXA9_MEIS1.p2	0.372	MEIS1 HOXA9
T.p2	0.367	T
AGGUAGU	0.366
AUGACAC	0.359
AR.p2	0.349	AR
CUACAGU	0.335
UAUUGCU	0.313
NFIX.p2	0.309	NFIX
AUUGCAC	0.297
ADNP_IRX_SIX_ZHX.p2	0.296	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
AAUGCCC	0.282
CUUUGGU	0.270
AHR_ARNT_ARNT2.p2	0.266	ARNT AHR ARNT2
PAX8.p2	0.266	PAX8
ACUGCAU	0.243
AAUCUCA	0.236
UGUGCGU	0.235
AAUACUG	0.203
UAAUGCU	0.165
AGCUUAU	0.165
HOX{A5,B5}.p2	0.133	HOXB5 HOXA5
STAT5{A,B}.p2	0.094	STAT5B STAT5A
CEBPA,B_DDIT3.p2	0.091	DDIT3 CEBPA CEBPB
SOX{8,9,10}.p2	0.078	SOX9 SOX8 SOX10
SPZ1.p2	0.069	SPZ1
NKX3-1.p2	0.068	NKX3-1
FOXL1.p2	0.066	FOXL1
UUGGUCC	0.049
TFEB.p2	0.043	TFEB
AACCUGG	0.042
PITX1..3.p2	0.035	PITX2 PITX3 PITX1
AUGUGCC	0.028
FOSL2.p2	0.026	FOSL2
FOXQ1.p2	-0.006	FOXQ1
FOX{I1,J2}.p2	-0.016	FOXI1 FOXJ2
AAGGCAC	-0.032
ACCCGUA	-0.035
PAX3,7.p2	-0.039	PAX7 PAX3
GCUACAU	-0.052
SOX5.p2	-0.089	SOX5
GGACGGA	-0.110
GAUAUGU	-0.113
CGUACCG	-0.114
UGCAUUG	-0.127
ACAUUCA	-0.149
TFAP2{A,C}.p2	-0.152	TFAP2C TFAP2A
SREBF1,2.p2	-0.155	SREBF1 SREBF2
UUGGCAA	-0.168
GGAAGAC	-0.180
GCUGGUG	-0.192
GLI1..3.p2	-0.194	GLI1 GLI2 GLI3
HOX{A4,D4}.p2	-0.196	HOXA4 HOXD4
AACGGAA	-0.204
NANOG.p2	-0.208	NANOG
GAUUGUC	-0.213
DBP.p2	-0.216	DBP
UGACCUA	-0.261
GZF1.p2	-0.264	GZF1
EGR1..3.p2	-0.285	EGR3 EGR1 EGR2
ACUGGCC	-0.291
GFI1B.p2	-0.334	GFI1B
UUGGCAC	-0.339
AACCGUU	-0.341
AAGGUGC	-0.350
CCUUCAU	-0.369
CCAGUGU	-0.391
VSX1,2.p2	-0.405	VSX2 VSX1
FOXO1,3,4.p2	-0.433	FOXO1 FOXO4 FOXO3
NR6A1.p2	-0.440	NR6A1
GCAGCAU	-0.444
ESR1.p2	-0.465	ESR1
IKZF2.p2	-0.501	IKZF2
CREB1.p2	-0.504	CREB1
NKX6-1,2.p2	-0.511	NKX6-1 NKX6-2
NFE2.p2	-0.565	NFE2
ACAGUAC	-0.595
UAAGACG	-0.614
CAGUGCA	-0.660
GFI1.p2	-0.671	GFI1
AACAGUC	-0.681
ACAGUAU	-0.689
CRX.p2	-0.712	CRX
HOX{A6,A7,B6,B7}.p2	-0.743	HOXB6 HOXA7 HOXB7 HOXA6
GGAGUGU	-0.771
CUX2.p2	-0.775	CUX2
ZBTB6.p2	-0.775	ZBTB6
EP300.p2	-0.783	EP300
KLF4.p3	-0.816	KLF4
EWSR1-FLI1.p2	-0.862	FLI1 EWSR1
ZFP161.p2	-0.869	ZFP161
ARID5B.p2	-0.896	ARID5B
DMAP1_NCOR{1,2}_SMARC.p2	-0.906	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
PRDM1.p3	-0.915	PRDM1
UCCAGUU	-0.915
GUAACAG	-0.933
ONECUT1,2.p2	-1.012	ONECUT2 ONECUT1
ZBTB16.p2	-1.032	ZBTB16
NFE2L1.p2	-1.141	NFE2L1
ATF2.p2	-1.189	ATF2
AUGGCAC	-1.202
PAX4.p2	-1.247	PAX4
LMO2.p2	-1.286	LMO2
GUAGUGU	-1.317
NR5A1,2.p2	-1.389	NR5A1 NR5A2
UCACAUU	-1.404
NR4A2.p2	-1.405	NR4A2
FOXD3.p2	-1.408	FOXD3
CTCF.p2	-1.490	CTCF
NKX2-2,8.p2	-1.625	NKX2-2 NKX2-8
SPI1.p2	-1.773	SPI1
SOX2.p2	-1.831	SOX2
PAX5.p2	-1.864	PAX5
FOXN1.p2	-1.932	FOXN1
SP1.p2	-1.980	SP1
SOX17.p2	-2.030	SOX17
GUGCAAA	-2.059
ZNF148.p2	-2.062	ZNF148
AGUGGUU	-2.069
RXRG_dimer.p3	-2.132	NR1H2 RXRA PPARG PPARA RXRB RXRG
PBX1.p2	-2.179	PBX1
NKX3-2.p2	-2.341	NKX3-2
SPIB.p2	-2.462	SPIB
TFAP2B.p2	-2.474	TFAP2B
NFE2L2.p2	-2.501	NFE2L2
PATZ1.p2	-2.599	PATZ1
BACH2.p2	-2.661	BACH2
TP53.p2	-2.848	TP53
E2F1..5.p2	-3.042	E2F4 E2F5 E2F2 E2F1 E2F3
HES1.p2	-3.179	HES1
TFDP1.p2	-3.290	TFDP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.388	ARNT MAX MYC USF1 BHLHB2 ARNT2
ATF4.p2	-3.482	ATF4
bHLH_family.p2	-3.584	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	-3.841	HIF1A
BPTF.p2	-3.950	BPTF
MAFB.p2	-3.963	MAFB
MYB.p2	-3.999	MYB
ATF5_CREB3.p2	-4.443	ATF5 CREB3
EHF.p2	-4.539	EHF
ESRRA.p2	-4.684	ESRRA
XBP1.p3	-4.978	XBP1
ELF1,2,4.p2	-5.621	ELF2 ELF1 ELF4
GGAAUGU	-5.881
ELK1,4_GABP{A,B1}.p3	-6.699	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NFY{A,B,C}.p2	-6.787	NFYC NFYB NFYA
ZNF143.p2	-7.636	ZNF143
NRF1.p2	-11.984	NRF1
YY1.p2	-12.630	YY1

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Sample name: GNF_1_TrigeminalGanglion

Sorted z-values for every WM.