ISMARA results: GNF_1

Sample name: GNF_1_WholeBrain

Sorted Z-values histogram for the sample GNF_1_WholeBrain

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	6.970	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	6.929	REST
ESRRA.p2	5.094	ESRRA
MAFB.p2	4.994	MAFB
GGCAGUG	4.802
NHLH1,2.p2	4.694	NHLH1 NHLH2
KLF12.p2	4.629	KLF12
HIC1.p2	4.553	HIC1
ZFP161.p2	4.530	ZFP161
MTF1.p2	4.156	MTF1
GATA1..3.p2	4.130	GATA1 GATA2 GATA3
JUN.p2	4.127	JUN JUND JUNB
FOX{I1,J2}.p2	4.054	FOXI1 FOXJ2
ATF2.p2	4.042	ATF2
CAGCAGG	3.965
UGUGCUU	3.949
HOX{A6,A7,B6,B7}.p2	3.928	HOXB6 HOXA7 HOXB7 HOXA6
MYOD1.p2	3.593	MYOD1
MEF2{A,B,C,D}.p2	3.518	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
RREB1.p2	3.366	RREB1
PAX2.p2	3.188	PAX2
TCF4_dimer.p2	3.164	TCF4
TGIF1.p2	3.096	TGIF1
PAX4.p2	3.032	PAX4
ZIC1..3.p2	2.944	ZIC1 ZIC2 ZIC3
NR5A1,2.p2	2.902	NR5A1 NR5A2
SP1.p2	2.855	SP1
SOX2.p2	2.750	SOX2
MZF1.p2	2.747	MZF1
GGAAGAC	2.734
EGR1..3.p2	2.683	EGR3 EGR1 EGR2
GGCUCAG	2.670
EWSR1-FLI1.p2	2.535	FLI1 EWSR1
GTF2I.p2	2.525	GTF2I
ZBTB6.p2	2.522	ZBTB6
DBP.p2	2.493	DBP
AAUACUG	2.486
POU5F1.p2	2.463	POU5F1
GUGCAAA	2.393
AUGGCUU	2.339
SOX{8,9,10}.p2	2.302	SOX9 SOX8 SOX10
SPZ1.p2	2.288	SPZ1
SRY.p2	2.223	SRY
UUGGCAC	2.173
NFIX.p2	2.156	NFIX
IKZF2.p2	2.109	IKZF2
FOXO1,3,4.p2	2.094	FOXO1 FOXO4 FOXO3
TAL1_TCF{3,4,12}.p2	2.046	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
HOX{A5,B5}.p2	2.016	HOXB5 HOXA5
UGCAUAG	2.002
AGCAGCA	2.001
TFEB.p2	1.871	TFEB
AGUGCAA	1.865
UAUUGCU	1.858
FOXP3.p2	1.688	FOXP3
POU5F1_SOX2{dimer}.p2	1.677	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
TFCP2.p2	1.636	TFCP2
CTCF.p2	1.617	CTCF
TFAP2B.p2	1.585	TFAP2B
GCUACAU	1.569
GUAAACA	1.542
MAZ.p2	1.524	MAZ
GGCAAGA	1.515
GUCAGUU	1.508
ACAUUCA	1.489
LMO2.p2	1.461	LMO2
UAAGACG	1.456
NKX2-3_NKX2-5.p2	1.456	NKX2-5 NKX2-3
AACAGUC	1.454
SMAD1..7,9.p2	1.378	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HAND1,2.p2	1.356	HAND1 HAND2
HMGA1,2.p2	1.331	HMGA1 HMGA2
UUGGUCC	1.322
GFI1.p2	1.284	GFI1
STAT2,4,6.p2	1.177	STAT2 STAT4 STAT6
UCACAGU	1.125
NFIL3.p2	1.093	NFIL3
TBX4,5.p2	1.074	TBX5 TBX4
PBX1.p2	1.007	PBX1
IKZF1.p2	0.997	IKZF1
GAUCAGA	0.956
AAGUGCU	0.938
EVI1.p2	0.925	EVI1
GCUGGUG	0.923
CCAGCAU	0.882
HES1.p2	0.866	HES1
EOMES.p2	0.846	EOMES
UCCCUUU	0.800
AGCAGCG	0.797
GLI1..3.p2	0.793	GLI1 GLI2 GLI3
PAX3,7.p2	0.793	PAX7 PAX3
GTF2A1,2.p2	0.743	GTF2A1 GTF2A2
HSF1,2.p2	0.728	HSF1 HSF2
GFI1B.p2	0.708	GFI1B
NKX3-2.p2	0.687	NKX3-2
AAAGUGC	0.676
NR3C1.p2	0.671	NR3C1
CEBPA,B_DDIT3.p2	0.661	DDIT3 CEBPA CEBPB
UGUGCGU	0.617
GZF1.p2	0.612	GZF1
GAGAACU	0.597
STAT5{A,B}.p2	0.593	STAT5B STAT5A
MYFfamily.p2	0.571	MYOD1 MYF6 MYF5 MYOG
HIF1A.p2	0.563	HIF1A
NR4A2.p2	0.526	NR4A2
AUUGCAC	0.522
ACUGGCC	0.514
ALX1.p2	0.501	ALX1
HBP1_HMGB_SSRP1_UBTF.p2	0.494	HMGB2 HMGB3 SSRP1 UBTF HBP1
CRX.p2	0.493	CRX
NR1H4.p2	0.478	NR1H4
NANOG{mouse}.p2	0.473	NANOG
ZEB1.p2	0.464	ZEB1
FOX{F1,F2,J1}.p2	0.462	FOXF2 FOXJ1 FOXF1
FEV.p2	0.458	FEV
EBF1.p2	0.439	EBF1
TP53.p2	0.428	TP53
NANOG.p2	0.424	NANOG
GGACGGA	0.423
SREBF1,2.p2	0.423	SREBF1 SREBF2
NFE2L1.p2	0.352	NFE2L1
CUX2.p2	0.341	CUX2
TBP.p2	0.339	TBP
NRF1.p2	0.333	NRF1
AACGGAA	0.309
ESR1.p2	0.309	ESR1
PRRX1,2.p2	0.303	PRRX2 PRRX1
ATF5_CREB3.p2	0.286	ATF5 CREB3
CGUGUCU	0.268
RUNX1..3.p2	0.261	RUNX1 RUNX3 RUNX2
CDX1,2,4.p2	0.246	CDX1 CDX2 CDX4
RXR{A,B,G}.p2	0.243	RXRA RXRB RXRG
POU6F1.p2	0.237	POU6F1
GAGAUGA	0.223
RORA.p2	0.217	RORA
CUACAGU	0.209
FOXN1.p2	0.203	FOXN1
UGCAUUG	0.188
TLX1..3_NFIC{dimer}.p2	0.132	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU3F1..4.p2	0.102	POU3F1 POU3F3 POU3F2 POU3F4
STAT1,3.p3	0.100	STAT1 STAT3
NKX3-1.p2	0.100	NKX3-1
AUGACAC	0.083
AACCGUU	0.081
PAX6.p2	0.076	PAX6
AGCUGCC	0.069
NFE2L2.p2	0.055	NFE2L2
HOXA9_MEIS1.p2	0.047	MEIS1 HOXA9
PDX1.p2	0.035	PDX1
AUGGCAC	0.027
CACAGUG	0.027
UAAGACU	0.021
PAX8.p2	0.009	PAX8
ZNF423.p2	0.006	ZNF423
NKX2-2,8.p2	-0.020	NKX2-2 NKX2-8
NR6A1.p2	-0.031	NR6A1
ACCCGUA	-0.060
NFE2.p2	-0.078	NFE2
ARID5B.p2	-0.087	ARID5B
GAUAUGU	-0.097
AR.p2	-0.100	AR
RXRA_VDR{dimer}.p2	-0.104	VDR	$logo of RXRA_VDR{dimer}.p2$
ATF4.p2	-0.117	ATF4
NKX2-1,4.p2	-0.118	NKX2-1 NKX2-4
GCAGCAU	-0.118
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.145	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GGAGUGU	-0.146
AGGUAGU	-0.158
AIRE.p2	-0.169	AIRE
ACCCUGU	-0.174
FOX{D1,D2}.p2	-0.183	FOXD2 FOXD1
LHX3,4.p2	-0.244	LHX3 LHX4
HMX1.p2	-0.263	HMX1
AAGGUGC	-0.263
CAGUGCA	-0.288
AAUCUCU	-0.300
ZNF143.p2	-0.303	ZNF143
CDC5L.p2	-0.309	CDC5L
UGACCUA	-0.332
UGAAAUG	-0.360
GUAGUGU	-0.366
AAUGCCC	-0.367
AAUCUCA	-0.391
GGAAUGU	-0.399
HNF4A_NR2F1,2.p2	-0.400	NR2F1 NR2F2 HNF4A
ACUGCAU	-0.420
CGUACCG	-0.431
AACACUG	-0.445
MSX1,2.p2	-0.451	MSX1 MSX2
NKX6-1,2.p2	-0.462	NKX6-1 NKX6-2
AACCUGG	-0.499
ADNP_IRX_SIX_ZHX.p2	-0.518	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
VSX1,2.p2	-0.541	VSX2 VSX1
FOXL1.p2	-0.573	FOXL1
UUGGCAA	-0.596
CCCUGAG	-0.605
PRDM1.p3	-0.614	PRDM1
LEF1_TCF7_TCF7L1,2.p2	-0.617	TCF7 TCF7L2 LEF1 TCF7L1
EP300.p2	-0.655	EP300
EN1,2.p2	-0.691	EN1 EN2
bHLH_family.p2	-0.747	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SPIB.p2	-0.799	SPIB
GUAACAG	-0.808
FOX{C1,C2}.p2	-0.844	FOXC1 FOXC2
ZNF238.p2	-0.895	ZNF238
T.p2	-0.904	T
AGCUUAU	-0.913
UCACAUU	-0.918
SOX5.p2	-0.923	SOX5
MYBL2.p2	-0.930	MYBL2
HOX{A4,D4}.p2	-0.941	HOXA4 HOXD4
CCAGUGU	-0.955
BACH2.p2	-0.958	BACH2
ZNF384.p2	-0.963	ZNF384
GAUUGUC	-0.981
UUGUUCG	-0.996
ACAGUAC	-1.013
CCUUCAU	-1.031
AGUGGUU	-1.056
BPTF.p2	-1.120	BPTF
UCCAGUU	-1.124
POU1F1.p2	-1.179	POU1F1
ELK1,4_GABP{A,B1}.p3	-1.183	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
AUGUGCC	-1.205
UAAUGCU	-1.206
PATZ1.p2	-1.240	PATZ1
PAX5.p2	-1.257	PAX5
TFAP2{A,C}.p2	-1.277	TFAP2C TFAP2A
TEAD1.p2	-1.390	TEAD1 TEAD2 TEAD3 TEAD4
EHF.p2	-1.390	EHF
FOSL2.p2	-1.417	FOSL2
RXRG_dimer.p3	-1.504	NR1H2 RXRA PPARG PPARA RXRB RXRG
CUCCCAA	-1.510
TLX2.p2	-1.511	TLX2
NFATC1..3.p2	-1.517	NFATC3 NFATC2 NFATC1
FOXQ1.p2	-1.540	FOXQ1
SNAI1..3.p2	-1.547	SNAI2 SNAI1 SNAI3
ONECUT1,2.p2	-1.575	ONECUT2 ONECUT1
YY1.p2	-1.635	YY1
ETS1,2.p2	-1.639	ETS2 ETS1
ZNF148.p2	-1.691	ZNF148
HLF.p2	-1.755	HLF
PPARG.p2	-1.758	PPARG
DMAP1_NCOR{1,2}_SMARC.p2	-1.812	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GAGGUAG	-1.865
ATF6.p2	-1.874	ATF6
AGCACCA	-2.083
GATA6.p2	-2.103	GATA6
SOX17.p2	-2.151	SOX17
SRF.p3	-2.155	SRF
ACAGUAU	-2.158
AHR_ARNT_ARNT2.p2	-2.334	ARNT AHR ARNT2
KLF4.p3	-2.349	KLF4
FOXA2.p3	-2.358	FOXA2
TFAP4.p2	-2.425	TFAP4
HNF1A.p2	-2.500	HNF1A
POU2F1..3.p2	-2.640	POU2F2 POU2F1 POU2F3
ZBTB16.p2	-3.055	ZBTB16
RBPJ.p2	-3.061	RBPJ
FOXD3.p2	-3.065	FOXD3
XBP1.p3	-3.133	XBP1
IRF1,2,7.p3	-3.217	IRF1 IRF2 IRF7
UCAAGUA	-3.351
PITX1..3.p2	-3.451	PITX2 PITX3 PITX1
CREB1.p2	-3.509	CREB1
CUUUGGU	-3.556
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.695	ARNT MAX MYC USF1 BHLHB2 ARNT2
MYB.p2	-3.925	MYB
SPI1.p2	-3.994	SPI1
UUUUUGC	-4.081
NFY{A,B,C}.p2	-4.092	NFYC NFYB NFYA
NFKB1_REL_RELA.p2	-4.191	RELA REL NFKB1
ELF1,2,4.p2	-4.672	ELF2 ELF1 ELF4
AAGGCAC	-5.883
TFDP1.p2	-6.096	TFDP1
E2F1..5.p2	-7.421	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: GNF_1_WholeBrain

Sorted z-values for every WM.