ISMARA results: GNF_1_caudatenucleus

Sample name: GNF_1_caudatenucleus

Sorted Z-values histogram for the sample GNF_1_caudatenucleus

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	7.563	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	6.874	REST
KLF12.p2	5.145	KLF12
MYOD1.p2	5.142	MYOD1
HIC1.p2	4.865	HIC1
RREB1.p2	4.456	RREB1
GGCAGUG	4.372
EGR1..3.p2	4.166	EGR3 EGR1 EGR2
CUCCCAA	4.139
ZIC1..3.p2	4.052	ZIC1 ZIC2 ZIC3
TGIF1.p2	4.035	TGIF1
MZF1.p2	3.870	MZF1
JUN.p2	3.852	JUN JUND JUNB
SMAD1..7,9.p2	3.614	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
UGUGCUU	3.543
TCF4_dimer.p2	3.260	TCF4
GGCUCAG	3.077
MTF1.p2	3.026	MTF1
EVI1.p2	2.976	EVI1
EBF1.p2	2.956	EBF1
TFCP2.p2	2.940	TFCP2
GATA1..3.p2	2.925	GATA1 GATA2 GATA3
SRY.p2	2.827	SRY
CAGCAGG	2.816
AGUGCAA	2.696
AGCAGCA	2.649
ATF2.p2	2.626	ATF2
SOX{8,9,10}.p2	2.490	SOX9 SOX8 SOX10
FOXP3.p2	2.481	FOXP3
NHLH1,2.p2	2.474	NHLH1 NHLH2
TAL1_TCF{3,4,12}.p2	2.431	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GTF2I.p2	2.427	GTF2I
HOX{A6,A7,B6,B7}.p2	2.422	HOXB6 HOXA7 HOXB7 HOXA6
LMO2.p2	2.336	LMO2
UUGGUCC	2.300
ZFP161.p2	2.272	ZFP161
FOX{I1,J2}.p2	2.212	FOXI1 FOXJ2
UCCCUUU	2.186
GTF2A1,2.p2	2.169	GTF2A1 GTF2A2
PAX2.p2	2.111	PAX2
MYFfamily.p2	2.108	MYOD1 MYF6 MYF5 MYOG
UUGGCAC	2.045
MEF2{A,B,C,D}.p2	2.043	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UGCAUAG	2.039
FEV.p2	2.015	FEV
GLI1..3.p2	1.982	GLI1 GLI2 GLI3
STAT2,4,6.p2	1.981	STAT2 STAT4 STAT6
ZNF384.p2	1.962	ZNF384
NFIX.p2	1.912	NFIX
ALX1.p2	1.901	ALX1
POU5F1.p2	1.889	POU5F1
SP1.p2	1.854	SP1
CCAGCAU	1.792
NKX2-3_NKX2-5.p2	1.770	NKX2-5 NKX2-3
ESRRA.p2	1.769	ESRRA
HNF4A_NR2F1,2.p2	1.753	NR2F1 NR2F2 HNF4A
TBX4,5.p2	1.735	TBX5 TBX4
EN1,2.p2	1.723	EN1 EN2
HAND1,2.p2	1.653	HAND1 HAND2
TLX1..3_NFIC{dimer}.p2	1.649	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NFIL3.p2	1.638	NFIL3
AAAGUGC	1.636
NANOG{mouse}.p2	1.630	NANOG
MAFB.p2	1.613	MAFB
NR1H4.p2	1.566	NR1H4
GAGAACU	1.552
NANOG.p2	1.551	NANOG
NR4A2.p2	1.551	NR4A2
ZBTB6.p2	1.545	ZBTB6
EOMES.p2	1.533	EOMES
CACAGUG	1.428
GUCAGUU	1.406
AUGGCUU	1.398
NR3C1.p2	1.394	NR3C1
PAX4.p2	1.388	PAX4
RXR{A,B,G}.p2	1.386	RXRA RXRB RXRG
GUGCAAA	1.298
HOX{A5,B5}.p2	1.269	HOXB5 HOXA5
IKZF2.p2	1.268	IKZF2
GGCAAGA	1.226
HBP1_HMGB_SSRP1_UBTF.p2	1.214	HMGB2 HMGB3 SSRP1 UBTF HBP1
AUUGCAC	1.169
PRRX1,2.p2	1.163	PRRX2 PRRX1
SPZ1.p2	1.162	SPZ1
NR5A1,2.p2	1.134	NR5A1 NR5A2
CDC5L.p2	1.132	CDC5L
IKZF1.p2	1.129	IKZF1
ETS1,2.p2	1.129	ETS2 ETS1
HMX1.p2	1.110	HMX1
UAAGACG	1.089
NKX2-1,4.p2	1.085	NKX2-1 NKX2-4
STAT1,3.p3	1.075	STAT1 STAT3
RXRA_VDR{dimer}.p2	1.057	VDR	$logo of RXRA_VDR{dimer}.p2$
RUNX1..3.p2	1.049	RUNX1 RUNX3 RUNX2
LEF1_TCF7_TCF7L1,2.p2	1.037	TCF7 TCF7L2 LEF1 TCF7L1
TFAP2{A,C}.p2	1.016	TFAP2C TFAP2A
SREBF1,2.p2	0.976	SREBF1 SREBF2
CUACAGU	0.938
MSX1,2.p2	0.904	MSX1 MSX2
AAUACUG	0.897
MAZ.p2	0.895	MAZ
GAGAUGA	0.888
DBP.p2	0.880	DBP
TBP.p2	0.864	TBP
FOXO1,3,4.p2	0.839	FOXO1 FOXO4 FOXO3
NKX3-1.p2	0.837	NKX3-1
RORA.p2	0.822	RORA
POU5F1_SOX2{dimer}.p2	0.796	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CTCF.p2	0.785	CTCF
TFEB.p2	0.743	TFEB
HOXA9_MEIS1.p2	0.742	MEIS1 HOXA9
AR.p2	0.739	AR
POU2F1..3.p2	0.722	POU2F2 POU2F1 POU2F3
GGAAGAC	0.636
ESR1.p2	0.628	ESR1
PDX1.p2	0.619	PDX1
GFI1.p2	0.615	GFI1
HSF1,2.p2	0.614	HSF1 HSF2
SNAI1..3.p2	0.607	SNAI2 SNAI1 SNAI3
EWSR1-FLI1.p2	0.597	FLI1 EWSR1
ACAUUCA	0.575
CGUGUCU	0.574
AAGUGCU	0.558
ACUGGCC	0.558
GAUCAGA	0.534
AUGACAC	0.526
CCCUGAG	0.512
UGCAUUG	0.510
HMGA1,2.p2	0.507	HMGA1 HMGA2
AGCAGCG	0.499
PAX3,7.p2	0.498	PAX7 PAX3
CUX2.p2	0.490	CUX2
UAAGACU	0.478
PAX6.p2	0.464	PAX6
POU1F1.p2	0.443	POU1F1
GAGGUAG	0.431
VSX1,2.p2	0.391	VSX2 VSX1
GGACGGA	0.385
UGUGCGU	0.339
AIRE.p2	0.332	AIRE
AACAGUC	0.302
AGCUGCC	0.301
FOX{D1,D2}.p2	0.285	FOXD2 FOXD1
ACUGCAU	0.281
NKX3-2.p2	0.271	NKX3-2
AAGGUGC	0.245
HLF.p2	0.237	HLF
PAX8.p2	0.237	PAX8
GZF1.p2	0.221	GZF1
NFE2L1.p2	0.215	NFE2L1
ZNF423.p2	0.211	ZNF423
TEAD1.p2	0.198	TEAD1 TEAD2 TEAD3 TEAD4
UGAAAUG	0.184
GCUGGUG	0.173
GGAGUGU	0.161
GUAAACA	0.147
MYBL2.p2	0.121	MYBL2
GFI1B.p2	0.103	GFI1B
AACACUG	0.100
FOXL1.p2	0.093	FOXL1
FOS_FOS{B,L1}_JUN{B,D}.p2	0.058	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
FOSL2.p2	0.050	FOSL2
GCUACAU	0.043
STAT5{A,B}.p2	0.040	STAT5B STAT5A
UAUUGCU	0.026
CDX1,2,4.p2	0.019	CDX1 CDX2 CDX4
HOX{A4,D4}.p2	0.001	HOXA4 HOXD4
POU3F1..4.p2	-0.015	POU3F1 POU3F3 POU3F2 POU3F4
FOX{F1,F2,J1}.p2	-0.030	FOXF2 FOXJ1 FOXF1
SOX2.p2	-0.048	SOX2
ACCCGUA	-0.061
FOX{C1,C2}.p2	-0.078	FOXC1 FOXC2
CCAGUGU	-0.085
AACGGAA	-0.093
AAUCUCU	-0.097
GUAGUGU	-0.124
DMAP1_NCOR{1,2}_SMARC.p2	-0.139	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CEBPA,B_DDIT3.p2	-0.164	DDIT3 CEBPA CEBPB
NKX6-1,2.p2	-0.168	NKX6-1 NKX6-2
ZEB1.p2	-0.181	ZEB1
POU6F1.p2	-0.181	POU6F1
UCACAGU	-0.224
AACCGUU	-0.226
UUGUUCG	-0.236
AGGUAGU	-0.237
ACCCUGU	-0.250
RBPJ.p2	-0.262	RBPJ
CGUACCG	-0.263
GAUAUGU	-0.277
T.p2	-0.287	T
UGACCUA	-0.293
ARID5B.p2	-0.328	ARID5B
ONECUT1,2.p2	-0.330	ONECUT2 ONECUT1
HNF1A.p2	-0.340	HNF1A
AAUGCCC	-0.344
CAGUGCA	-0.352
TLX2.p2	-0.382	TLX2
UUUUUGC	-0.409
NR6A1.p2	-0.446	NR6A1
ATF6.p2	-0.529	ATF6
AACCUGG	-0.589
UCACAUU	-0.631
AAUCUCA	-0.679
CRX.p2	-0.688	CRX
CCUUCAU	-0.738
ZNF238.p2	-0.766	ZNF238
SOX5.p2	-0.794	SOX5
FOXA2.p3	-0.937	FOXA2
LHX3,4.p2	-0.966	LHX3 LHX4
PATZ1.p2	-0.978	PATZ1
UCCAGUU	-0.995
GCAGCAU	-0.998
GATA6.p2	-1.005	GATA6
HES1.p2	-1.010	HES1
GUAACAG	-1.032
TFAP4.p2	-1.034	TFAP4
NKX2-2,8.p2	-1.038	NKX2-2 NKX2-8
ZNF148.p2	-1.093	ZNF148
NFE2L2.p2	-1.111	NFE2L2
ZBTB16.p2	-1.136	ZBTB16
AUGUGCC	-1.188
AUGGCAC	-1.247
ACAGUAC	-1.270
AGUGGUU	-1.284
AGCUUAU	-1.330
NFE2.p2	-1.340	NFE2
BACH2.p2	-1.438	BACH2
BPTF.p2	-1.464	BPTF
ACAGUAU	-1.575
AHR_ARNT_ARNT2.p2	-1.626	ARNT AHR ARNT2
NFATC1..3.p2	-1.663	NFATC3 NFATC2 NFATC1
UUGGCAA	-1.695
ADNP_IRX_SIX_ZHX.p2	-1.717	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
FOXN1.p2	-1.719	FOXN1
PPARG.p2	-1.728	PPARG
PAX5.p2	-1.765	PAX5
PRDM1.p3	-1.767	PRDM1
TP53.p2	-1.932	TP53
GGAAUGU	-1.955
RXRG_dimer.p3	-1.973	NR1H2 RXRA PPARG PPARA RXRB RXRG
PBX1.p2	-2.001	PBX1
SRF.p3	-2.009	SRF
FOXQ1.p2	-2.040	FOXQ1
UCAAGUA	-2.125
ATF5_CREB3.p2	-2.137	ATF5 CREB3
GAUUGUC	-2.144
TFAP2B.p2	-2.277	TFAP2B
AGCACCA	-2.304
ATF4.p2	-2.375	ATF4
FOXD3.p2	-2.388	FOXD3
CREB1.p2	-2.398	CREB1
UAAUGCU	-2.421
HIF1A.p2	-2.436	HIF1A
EP300.p2	-2.607	EP300
AAGGCAC	-2.622
CUUUGGU	-2.997
NFKB1_REL_RELA.p2	-3.035	RELA REL NFKB1
KLF4.p3	-3.162	KLF4
IRF1,2,7.p3	-3.193	IRF1 IRF2 IRF7
PITX1..3.p2	-3.239	PITX2 PITX3 PITX1
EHF.p2	-3.427	EHF
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.514	ARNT MAX MYC USF1 BHLHB2 ARNT2
SPI1.p2	-3.520	SPI1
SPIB.p2	-3.615	SPIB
SOX17.p2	-3.648	SOX17
bHLH_family.p2	-3.678	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
XBP1.p3	-4.158	XBP1
MYB.p2	-4.498	MYB
ZNF143.p2	-5.003	ZNF143
TFDP1.p2	-5.122	TFDP1
ELK1,4_GABP{A,B1}.p3	-5.289	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NRF1.p2	-5.464	NRF1
ELF1,2,4.p2	-6.127	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	-6.188	NFYC NFYB NFYA
E2F1..5.p2	-6.920	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	-6.980	YY1

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Sample name: GNF_1_caudatenucleus

Sorted z-values for every WM.