ISMARA results: GNF_1_ciliaryganglion

Sample name: GNF_1_ciliaryganglion

Sorted Z-values histogram for the sample GNF_1_ciliaryganglion

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
UUUUUGC	9.504
CUCCCAA	8.750
TLX1..3_NFIC{dimer}.p2	5.269	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
KLF12.p2	3.933	KLF12
TBP.p2	3.664	TBP
TEAD1.p2	3.553	TEAD1 TEAD2 TEAD3 TEAD4
MZF1.p2	3.490	MZF1
EVI1.p2	3.481	EVI1
SMAD1..7,9.p2	3.395	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
UCCCUUU	3.142
HIC1.p2	3.096	HIC1
RREB1.p2	3.094	RREB1
SNAI1..3.p2	3.085	SNAI2 SNAI1 SNAI3
MTF1.p2	3.081	MTF1
TGIF1.p2	3.066	TGIF1
GTF2A1,2.p2	3.001	GTF2A1 GTF2A2
NFATC1..3.p2	2.751	NFATC3 NFATC2 NFATC1
TLX2.p2	2.733	TLX2
TFCP2.p2	2.700	TFCP2
JUN.p2	2.692	JUN JUND JUNB
STAT2,4,6.p2	2.565	STAT2 STAT4 STAT6
SRF.p3	2.552	SRF
MYFfamily.p2	2.418	MYOD1 MYF6 MYF5 MYOG
NHLH1,2.p2	2.326	NHLH1 NHLH2
EBF1.p2	2.269	EBF1
SRY.p2	2.167	SRY
NANOG{mouse}.p2	2.113	NANOG
AAAGUGC	2.105
NKX2-3_NKX2-5.p2	2.093	NKX2-5 NKX2-3
ETS1,2.p2	2.092	ETS2 ETS1
AGCACCA	2.091
GGCUCAG	2.091
GAGGUAG	2.062
STAT1,3.p3	2.028	STAT1 STAT3
UGUGCUU	1.933
ZIC1..3.p2	1.920	ZIC1 ZIC2 ZIC3
TBX4,5.p2	1.899	TBX5 TBX4
EN1,2.p2	1.886	EN1 EN2
FOXP3.p2	1.857	FOXP3
HSF1,2.p2	1.843	HSF1 HSF2
HMX1.p2	1.828	HMX1
GATA6.p2	1.819	GATA6
UGAAAUG	1.785
MYBL2.p2	1.757	MYBL2
POU1F1.p2	1.725	POU1F1
HBP1_HMGB_SSRP1_UBTF.p2	1.720	HMGB2 HMGB3 SSRP1 UBTF HBP1
ATF6.p2	1.706	ATF6
FOXL1.p2	1.698	FOXL1
ALX1.p2	1.694	ALX1
GTF2I.p2	1.671	GTF2I
TAL1_TCF{3,4,12}.p2	1.657	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
REST.p3	1.636	REST
LEF1_TCF7_TCF7L1,2.p2	1.623	TCF7 TCF7L2 LEF1 TCF7L1
AAUACUG	1.623
HNF4A_NR2F1,2.p2	1.539	NR2F1 NR2F2 HNF4A
FOX{D1,D2}.p2	1.455	FOXD2 FOXD1
AAUCUCU	1.449
FOSL2.p2	1.436	FOSL2
FEV.p2	1.419	FEV
FOS_FOS{B,L1}_JUN{B,D}.p2	1.376	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GATA1..3.p2	1.373	GATA1 GATA2 GATA3
POU5F1_SOX2{dimer}.p2	1.364	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
ZNF384.p2	1.353	ZNF384
CUACAGU	1.342
FOX{I1,J2}.p2	1.323	FOXI1 FOXJ2
RBPJ.p2	1.315	RBPJ
AIRE.p2	1.303	AIRE
LHX3,4.p2	1.302	LHX3 LHX4
CACAGUG	1.290
UUGUUCG	1.289
NR1H4.p2	1.286	NR1H4
FOXA2.p3	1.263	FOXA2
MYOD1.p2	1.250	MYOD1
PAX6.p2	1.200	PAX6
POU5F1.p2	1.173	POU5F1
GAGAUGA	1.169
CGUGUCU	1.169
CCCUGAG	1.161
POU2F1..3.p2	1.157	POU2F2 POU2F1 POU2F3
AUGGCUU	1.146
RXR{A,B,G}.p2	1.134	RXRA RXRB RXRG
GLI1..3.p2	1.072	GLI1 GLI2 GLI3
HNF1A.p2	1.064	HNF1A
NFIL3.p2	1.056	NFIL3
AGCUGCC	1.053
CCAGCAU	1.051
RFX1..5_RFXANK_RFXAP.p2	1.050	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
HOX{A5,B5}.p2	1.047	HOXB5 HOXA5
TFAP4.p2	1.009	TFAP4
ZNF238.p2	1.008	ZNF238
GAUCAGA	0.990
UGCAUAG	0.967
GGCAGUG	0.935
STAT5{A,B}.p2	0.920	STAT5B STAT5A
MEF2{A,B,C,D}.p2	0.913	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
RXRA_VDR{dimer}.p2	0.905	VDR	$logo of RXRA_VDR{dimer}.p2$
HLF.p2	0.900	HLF
GUAAACA	0.890
GAGAACU	0.889
AHR_ARNT_ARNT2.p2	0.867	ARNT AHR ARNT2
AAGGCAC	0.832
TCF4_dimer.p2	0.827	TCF4
POU3F1..4.p2	0.822	POU3F1 POU3F3 POU3F2 POU3F4
PRRX1,2.p2	0.780	PRRX2 PRRX1
HAND1,2.p2	0.755	HAND1 HAND2
POU6F1.p2	0.718	POU6F1
UAAGACU	0.717
AAGUGCU	0.685
GUCAGUU	0.677
AGCUUAU	0.654
NR3C1.p2	0.629	NR3C1
MSX1,2.p2	0.612	MSX1 MSX2
NFE2.p2	0.611	NFE2
TFEB.p2	0.610	TFEB
PDX1.p2	0.588	PDX1
HMGA1,2.p2	0.584	HMGA1 HMGA2
KLF4.p3	0.580	KLF4
ESR1.p2	0.576	ESR1
CDC5L.p2	0.535	CDC5L
FOXO1,3,4.p2	0.523	FOXO1 FOXO4 FOXO3
AGUGCAA	0.517
NR6A1.p2	0.511	NR6A1
AGCAGCG	0.507
CAGCAGG	0.494
NKX2-1,4.p2	0.492	NKX2-1 NKX2-4
UCACAGU	0.483
CUUUGGU	0.480
NFKB1_REL_RELA.p2	0.459	RELA REL NFKB1
FOX{C1,C2}.p2	0.452	FOXC1 FOXC2
ZEB1.p2	0.384	ZEB1
AUGACAC	0.381
AUUGCAC	0.367
AACACUG	0.360
ADNP_IRX_SIX_ZHX.p2	0.345	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
IKZF2.p2	0.332	IKZF2
MAZ.p2	0.325	MAZ
PPARG.p2	0.314	PPARG
ACUGCAU	0.312
UGUGCGU	0.300
PAX2.p2	0.253	PAX2
ACCCUGU	0.238
IRF1,2,7.p3	0.222	IRF1 IRF2 IRF7
GGCAAGA	0.205
PAX8.p2	0.202	PAX8
EGR1..3.p2	0.161	EGR3 EGR1 EGR2
ACUGGCC	0.158
UAAUGCU	0.145
SPZ1.p2	0.143	SPZ1
AAUCUCA	0.107
AACCUGG	0.092
ONECUT1,2.p2	0.058	ONECUT2 ONECUT1
GFI1.p2	0.044	GFI1
T.p2	0.034	T
DBP.p2	0.022	DBP
ATF2.p2	0.008	ATF2
CCAGUGU	0.007
ACAGUAC	-0.001
UAUUGCU	-0.007
AAUGCCC	-0.011
ACCCGUA	-0.022
DMAP1_NCOR{1,2}_SMARC.p2	-0.025	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CGUACCG	-0.025
PAX3,7.p2	-0.049	PAX7 PAX3
RUNX1..3.p2	-0.063	RUNX1 RUNX3 RUNX2
UGACCUA	-0.074
IKZF1.p2	-0.100	IKZF1
GGACGGA	-0.120
VSX1,2.p2	-0.133	VSX2 VSX1
AACGGAA	-0.133
ACAGUAU	-0.138
CAGUGCA	-0.155
UGCAUUG	-0.163
NFIX.p2	-0.180	NFIX
RORA.p2	-0.180	RORA
AGCAGCA	-0.209
AUGUGCC	-0.212
CEBPA,B_DDIT3.p2	-0.228	DDIT3 CEBPA CEBPB
UUGGCAC	-0.240
PAX4.p2	-0.250	PAX4
HOXA9_MEIS1.p2	-0.256	MEIS1 HOXA9
ACAUUCA	-0.261
AACCGUU	-0.293
GAUAUGU	-0.312
AR.p2	-0.337	AR
PRDM1.p3	-0.338	PRDM1
GZF1.p2	-0.353	GZF1
CDX1,2,4.p2	-0.364	CDX1 CDX2 CDX4
AGGUAGU	-0.366
GCUACAU	-0.374
UAAGACG	-0.388
UUGGUCC	-0.394
AAGGUGC	-0.401
GAUUGUC	-0.424
EWSR1-FLI1.p2	-0.426	FLI1 EWSR1
ZNF423.p2	-0.446	ZNF423
HOX{A6,A7,B6,B7}.p2	-0.447	HOXB6 HOXA7 HOXB7 HOXA6
SOX5.p2	-0.502	SOX5
GGAAGAC	-0.510
CCUUCAU	-0.510
EP300.p2	-0.516	EP300
NKX3-1.p2	-0.524	NKX3-1
NKX6-1,2.p2	-0.558	NKX6-1 NKX6-2
PITX1..3.p2	-0.584	PITX2 PITX3 PITX1
GUGCAAA	-0.585
UUGGCAA	-0.592
AGUGGUU	-0.618
ZBTB16.p2	-0.655	ZBTB16
GUAGUGU	-0.697
NFE2L1.p2	-0.698	NFE2L1
GGAGUGU	-0.707
FOX{F1,F2,J1}.p2	-0.721	FOXF2 FOXJ1 FOXF1
GCUGGUG	-0.752
SOX17.p2	-0.755	SOX17
FOXQ1.p2	-0.755	FOXQ1
SREBF1,2.p2	-0.775	SREBF1 SREBF2
GCAGCAU	-0.797
TFDP1.p2	-0.798	TFDP1
CUX2.p2	-0.799	CUX2
CRX.p2	-0.825	CRX
CREB1.p2	-0.836	CREB1
ZFP161.p2	-0.886	ZFP161
ZBTB6.p2	-0.923	ZBTB6
NANOG.p2	-0.933	NANOG
ARID5B.p2	-0.948	ARID5B
TFAP2{A,C}.p2	-1.064	TFAP2C TFAP2A
EOMES.p2	-1.074	EOMES
GUAACAG	-1.087
UCAAGUA	-1.090
AUGGCAC	-1.098
HOX{A4,D4}.p2	-1.127	HOXA4 HOXD4
GFI1B.p2	-1.219	GFI1B
UCCAGUU	-1.220
LMO2.p2	-1.399	LMO2
NR4A2.p2	-1.415	NR4A2
FOXN1.p2	-1.431	FOXN1
MAFB.p2	-1.469	MAFB
AACAGUC	-1.478
SPIB.p2	-1.536	SPIB
SOX{8,9,10}.p2	-1.609	SOX9 SOX8 SOX10
SOX2.p2	-1.630	SOX2
NKX3-2.p2	-1.719	NKX3-2
UCACAUU	-1.777
SPI1.p2	-1.816	SPI1
NKX2-2,8.p2	-1.871	NKX2-2 NKX2-8
ZNF148.p2	-1.958	ZNF148
TP53.p2	-2.089	TP53
PBX1.p2	-2.114	PBX1
PAX5.p2	-2.121	PAX5
NR5A1,2.p2	-2.166	NR5A1 NR5A2
CTCF.p2	-2.271	CTCF
TFAP2B.p2	-2.298	TFAP2B
BACH2.p2	-2.303	BACH2
RXRG_dimer.p3	-2.309	NR1H2 RXRA PPARG PPARA RXRB RXRG
PATZ1.p2	-2.335	PATZ1
FOXD3.p2	-2.335	FOXD3
SP1.p2	-2.367	SP1
HES1.p2	-2.600	HES1
bHLH_family.p2	-2.668	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	-2.886	HIF1A
ATF5_CREB3.p2	-3.087	ATF5 CREB3
BPTF.p2	-3.137	BPTF
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.138	ARNT MAX MYC USF1 BHLHB2 ARNT2
ATF4.p2	-3.701	ATF4
NFE2L2.p2	-3.811	NFE2L2
XBP1.p3	-4.395	XBP1
EHF.p2	-4.446	EHF
ESRRA.p2	-4.597	ESRRA
ELF1,2,4.p2	-4.830	ELF2 ELF1 ELF4
GGAAUGU	-4.852
MYB.p2	-5.106	MYB
E2F1..5.p2	-6.168	E2F4 E2F5 E2F2 E2F1 E2F3
NFY{A,B,C}.p2	-7.251	NFYC NFYB NFYA
ZNF143.p2	-8.652	ZNF143
ELK1,4_GABP{A,B1}.p3	-9.131	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NRF1.p2	-11.086	NRF1
YY1.p2	-12.160	YY1

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Sample name: GNF_1_ciliaryganglion

Sorted z-values for every WM.