ISMARA results: GNF_1_globuspallidus

Sample name: GNF_1_globuspallidus

Sorted Z-values histogram for the sample GNF_1_globuspallidus

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	7.148	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CUCCCAA	6.973
REST.p3	6.204	REST
RREB1.p2	5.799	RREB1
JUN.p2	5.249	JUN JUND JUNB
KLF12.p2	5.065	KLF12
TGIF1.p2	4.618	TGIF1
MYOD1.p2	4.466	MYOD1
UGUGCUU	4.302
GGCAGUG	4.229
HIC1.p2	4.135	HIC1
GATA1..3.p2	3.875	GATA1 GATA2 GATA3
GTF2I.p2	3.837	GTF2I
MZF1.p2	3.747	MZF1
SMAD1..7,9.p2	3.548	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TFCP2.p2	3.548	TFCP2
POU5F1.p2	3.492	POU5F1
TAL1_TCF{3,4,12}.p2	3.461	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GGCUCAG	3.409
EGR1..3.p2	3.346	EGR3 EGR1 EGR2
EVI1.p2	3.181	EVI1
NKX2-3_NKX2-5.p2	3.106	NKX2-5 NKX2-3
TCF4_dimer.p2	3.103	TCF4
EBF1.p2	3.020	EBF1
CAGCAGG	3.002
NHLH1,2.p2	2.953	NHLH1 NHLH2
TBX4,5.p2	2.872	TBX5 TBX4
MTF1.p2	2.872	MTF1
GTF2A1,2.p2	2.843	GTF2A1 GTF2A2
ZIC1..3.p2	2.811	ZIC1 ZIC2 ZIC3
UCCCUUU	2.802
HOX{A6,A7,B6,B7}.p2	2.753	HOXB6 HOXA7 HOXB7 HOXA6
FOXP3.p2	2.749	FOXP3
UGCAUAG	2.725
UUUUUGC	2.686
GGAAGAC	2.384
TLX1..3_NFIC{dimer}.p2	2.360	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
FEV.p2	2.315	FEV
AAAGUGC	2.305
FOX{I1,J2}.p2	2.295	FOXI1 FOXJ2
MAFB.p2	2.289	MAFB
ALX1.p2	2.275	ALX1
SOX{8,9,10}.p2	2.161	SOX9 SOX8 SOX10
SPZ1.p2	2.114	SPZ1
DBP.p2	2.087	DBP
GUCAGUU	2.084
LMO2.p2	2.032	LMO2
IKZF2.p2	2.030	IKZF2
MAZ.p2	1.990	MAZ
ATF2.p2	1.965	ATF2
STAT1,3.p3	1.956	STAT1 STAT3
AAUACUG	1.877
NR1H4.p2	1.868	NR1H4
UUGGUCC	1.847
LEF1_TCF7_TCF7L1,2.p2	1.842	TCF7 TCF7L2 LEF1 TCF7L1
UGAAAUG	1.832
PAX2.p2	1.794	PAX2
AUGGCUU	1.734
CCAGCAU	1.677
MEF2{A,B,C,D}.p2	1.615	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GLI1..3.p2	1.594	GLI1 GLI2 GLI3
AGUGCAA	1.575
CACAGUG	1.570
HOX{A5,B5}.p2	1.547	HOXB5 HOXA5
ZFP161.p2	1.516	ZFP161
HAND1,2.p2	1.513	HAND1 HAND2
CUACAGU	1.511
SOX5.p2	1.509	SOX5
STAT2,4,6.p2	1.502	STAT2 STAT4 STAT6
ACAUUCA	1.491
LHX3,4.p2	1.459	LHX3 LHX4
GAGAACU	1.443
FOXO1,3,4.p2	1.360	FOXO1 FOXO4 FOXO3
POU1F1.p2	1.333	POU1F1
SNAI1..3.p2	1.332	SNAI2 SNAI1 SNAI3
UAUUGCU	1.317
SRY.p2	1.316	SRY
GUAAACA	1.222
NR4A2.p2	1.219	NR4A2
GAGAUGA	1.215
GUGCAAA	1.210
AUUGCAC	1.203
PRRX1,2.p2	1.165	PRRX2 PRRX1
AGGUAGU	1.153
NFIL3.p2	1.145	NFIL3
STAT5{A,B}.p2	1.115	STAT5B STAT5A
GFI1.p2	1.102	GFI1
RXR{A,B,G}.p2	1.093	RXRA RXRB RXRG
UCACAGU	1.071
PAX4.p2	1.063	PAX4
TLX2.p2	1.054	TLX2
MYFfamily.p2	1.048	MYOD1 MYF6 MYF5 MYOG
EWSR1-FLI1.p2	1.038	FLI1 EWSR1
IKZF1.p2	1.023	IKZF1
HMX1.p2	1.013	HMX1
CDC5L.p2	1.012	CDC5L
GAUCAGA	1.011
UUGGCAC	1.004
NANOG{mouse}.p2	0.976	NANOG
CGUGUCU	0.964
NR5A1,2.p2	0.943	NR5A1 NR5A2
NFE2.p2	0.891	NFE2
GGCAAGA	0.858
AAGUGCU	0.851
CUX2.p2	0.823	CUX2
GCUGGUG	0.819
UAAGACG	0.793
SREBF1,2.p2	0.766	SREBF1 SREBF2
NANOG.p2	0.743	NANOG
HLF.p2	0.736	HLF
ETS1,2.p2	0.680	ETS2 ETS1
PAX6.p2	0.679	PAX6
FOXL1.p2	0.669	FOXL1
PAX3,7.p2	0.641	PAX7 PAX3
EN1,2.p2	0.630	EN1 EN2
CCCUGAG	0.626
TEAD1.p2	0.618	TEAD1 TEAD2 TEAD3 TEAD4
AAUCUCU	0.594
RORA.p2	0.591	RORA
AACAGUC	0.581
ACUGGCC	0.577
HNF4A_NR2F1,2.p2	0.547	NR2F1 NR2F2 HNF4A
FOX{F1,F2,J1}.p2	0.526	FOXF2 FOXJ1 FOXF1
PDX1.p2	0.519	PDX1
UAAGACU	0.510
NKX2-1,4.p2	0.501	NKX2-1 NKX2-4
ZEB1.p2	0.481	ZEB1
UGUGCGU	0.474
SOX2.p2	0.457	SOX2
POU3F1..4.p2	0.454	POU3F1 POU3F3 POU3F2 POU3F4
RXRA_VDR{dimer}.p2	0.451	VDR	$logo of RXRA_VDR{dimer}.p2$
AGCAGCG	0.447
AGCUGCC	0.446
ZNF423.p2	0.445	ZNF423
RUNX1..3.p2	0.437	RUNX1 RUNX3 RUNX2
GCAGCAU	0.413
NR3C1.p2	0.411	NR3C1
HBP1_HMGB_SSRP1_UBTF.p2	0.400	HMGB2 HMGB3 SSRP1 UBTF HBP1
AUGACAC	0.396
GATA6.p2	0.396	GATA6
ZBTB6.p2	0.395	ZBTB6
HMGA1,2.p2	0.381	HMGA1 HMGA2
MSX1,2.p2	0.329	MSX1 MSX2
NR6A1.p2	0.321	NR6A1
GZF1.p2	0.318	GZF1
AR.p2	0.248	AR
UUGUUCG	0.235
HSF1,2.p2	0.221	HSF1 HSF2
UGCAUUG	0.217
PAX8.p2	0.204	PAX8
AAGGUGC	0.199
GGACGGA	0.189
GAGGUAG	0.186
ACCCUGU	0.150
GCUACAU	0.128
ACUGCAU	0.120
CAGUGCA	0.089
AACACUG	0.081
AIRE.p2	0.080	AIRE
FOX{D1,D2}.p2	0.075	FOXD2 FOXD1
NFE2L1.p2	0.051	NFE2L1
ESRRA.p2	0.050	ESRRA
AAUCUCA	0.038
FOX{C1,C2}.p2	0.038	FOXC1 FOXC2
CTCF.p2	0.015	CTCF
EOMES.p2	0.011	EOMES
TFAP2B.p2	0.000	TFAP2B
NKX6-1,2.p2	-0.017	NKX6-1 NKX6-2
ARID5B.p2	-0.041	ARID5B
ACCCGUA	-0.069
ZNF238.p2	-0.072	ZNF238
GGAGUGU	-0.072
CGUACCG	-0.081
POU2F1..3.p2	-0.118	POU2F2 POU2F1 POU2F3
NKX3-1.p2	-0.126	NKX3-1
HOXA9_MEIS1.p2	-0.130	MEIS1 HOXA9
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.139	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AACCGUU	-0.142
POU5F1_SOX2{dimer}.p2	-0.143	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AGCAGCA	-0.156
UGACCUA	-0.168
AACGGAA	-0.189
AGCUUAU	-0.191
CEBPA,B_DDIT3.p2	-0.234	DDIT3 CEBPA CEBPB
GAUAUGU	-0.266
FOSL2.p2	-0.297	FOSL2
MYBL2.p2	-0.308	MYBL2
NFIX.p2	-0.342	NFIX
ESR1.p2	-0.375	ESR1
POU6F1.p2	-0.408	POU6F1
VSX1,2.p2	-0.428	VSX2 VSX1
TFEB.p2	-0.439	TFEB
ZBTB16.p2	-0.485	ZBTB16
AAUGCCC	-0.504
DMAP1_NCOR{1,2}_SMARC.p2	-0.518	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
T.p2	-0.527	T
ZNF384.p2	-0.557	ZNF384
GFI1B.p2	-0.557	GFI1B
HOX{A4,D4}.p2	-0.565	HOXA4 HOXD4
CCUUCAU	-0.573
AACCUGG	-0.621
HNF1A.p2	-0.651	HNF1A
GAUUGUC	-0.671
CDX1,2,4.p2	-0.722	CDX1 CDX2 CDX4
AUGGCAC	-0.731
SP1.p2	-0.761	SP1
IRF1,2,7.p3	-0.810	IRF1 IRF2 IRF7
PAX5.p2	-0.850	PAX5
CRX.p2	-0.861	CRX
RBPJ.p2	-0.882	RBPJ
ADNP_IRX_SIX_ZHX.p2	-1.034	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
HES1.p2	-1.044	HES1
PRDM1.p3	-1.177	PRDM1
PPARG.p2	-1.192	PPARG
NFATC1..3.p2	-1.218	NFATC3 NFATC2 NFATC1
UUGGCAA	-1.287
NKX2-2,8.p2	-1.296	NKX2-2 NKX2-8
ACAGUAC	-1.297
CCAGUGU	-1.298
FOXA2.p3	-1.307	FOXA2
GUAACAG	-1.307
AGCACCA	-1.308
TFAP2{A,C}.p2	-1.349	TFAP2C TFAP2A
UCCAGUU	-1.368
NKX3-2.p2	-1.380	NKX3-2
AGUGGUU	-1.405
AUGUGCC	-1.407
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.476	ARNT MAX MYC USF1 BHLHB2 ARNT2
ATF6.p2	-1.489	ATF6
UCACAUU	-1.524
PITX1..3.p2	-1.577	PITX2 PITX3 PITX1
ACAGUAU	-1.715
ONECUT1,2.p2	-1.772	ONECUT2 ONECUT1
PBX1.p2	-1.785	PBX1
TBP.p2	-1.820	TBP
GUAGUGU	-1.827
FOXN1.p2	-1.828	FOXN1
AHR_ARNT_ARNT2.p2	-1.920	ARNT AHR ARNT2
KLF4.p3	-1.930	KLF4
UAAUGCU	-1.976
TFAP4.p2	-2.009	TFAP4
CREB1.p2	-2.015	CREB1
FOXD3.p2	-2.023	FOXD3
NFE2L2.p2	-2.043	NFE2L2
PATZ1.p2	-2.066	PATZ1
FOXQ1.p2	-2.082	FOXQ1
HIF1A.p2	-2.127	HIF1A
EP300.p2	-2.138	EP300
ZNF148.p2	-2.190	ZNF148
UCAAGUA	-2.195
SRF.p3	-2.338	SRF
SPIB.p2	-2.400	SPIB
ATF5_CREB3.p2	-2.504	ATF5 CREB3
SOX17.p2	-2.515	SOX17
TP53.p2	-2.590	TP53
RXRG_dimer.p3	-2.594	NR1H2 RXRA PPARG PPARA RXRB RXRG
BACH2.p2	-2.811	BACH2
GGAAUGU	-2.846
NFKB1_REL_RELA.p2	-2.855	RELA REL NFKB1
CUUUGGU	-2.908
BPTF.p2	-3.162	BPTF
ATF4.p2	-3.305	ATF4
MYB.p2	-3.616	MYB
SPI1.p2	-3.715	SPI1
ZNF143.p2	-3.814	ZNF143
bHLH_family.p2	-3.878	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
EHF.p2	-4.324	EHF
XBP1.p3	-4.763	XBP1
TFDP1.p2	-5.039	TFDP1
E2F1..5.p2	-5.263	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	-5.669	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
AAGGCAC	-5.948
NRF1.p2	-6.174	NRF1
ELF1,2,4.p2	-6.601	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	-6.671	NFYC NFYB NFYA
YY1.p2	-9.388	YY1

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Sample name: GNF_1_globuspallidus

Sorted z-values for every WM.