ISMARA results: GNF_1

Sample name: GNF_1_kidney

Sorted Z-values histogram for the sample GNF_1_kidney

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
HNF1A.p2	11.044	HNF1A
HNF4A_NR2F1,2.p2	8.495	NR2F1 NR2F2 HNF4A
MYFfamily.p2	5.156	MYOD1 MYF6 MYF5 MYOG
RREB1.p2	4.705	RREB1
TGIF1.p2	4.152	TGIF1
SMAD1..7,9.p2	4.093	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
MYOD1.p2	3.996	MYOD1
SNAI1..3.p2	3.945	SNAI2 SNAI1 SNAI3
CAGCAGG	3.921
TBP.p2	3.661	TBP
TLX1..3_NFIC{dimer}.p2	3.642	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NANOG{mouse}.p2	3.605	NANOG
EN1,2.p2	3.416	EN1 EN2
CCCUGAG	3.375
MTF1.p2	3.316	MTF1
FOXP3.p2	3.085	FOXP3
NFIX.p2	3.037	NFIX
TEAD1.p2	2.983	TEAD1 TEAD2 TEAD3 TEAD4
UCCCUUU	2.982
EBF1.p2	2.770	EBF1
GATA6.p2	2.713	GATA6
NR4A2.p2	2.618	NR4A2
HAND1,2.p2	2.582	HAND1 HAND2
HIC1.p2	2.517	HIC1
CRX.p2	2.436	CRX
CACAGUG	2.435
AAAGUGC	2.428
JUN.p2	2.353	JUN JUND JUNB
NR5A1,2.p2	2.335	NR5A1 NR5A2
FOSL2.p2	2.180	FOSL2
HLF.p2	2.142	HLF
CUCCCAA	2.121
FOXA2.p3	2.105	FOXA2
ADNP_IRX_SIX_ZHX.p2	2.093	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GAGAUGA	2.093
FOX{C1,C2}.p2	2.077	FOXC1 FOXC2
UUGUUCG	2.062
NFKB1_REL_RELA.p2	2.030	RELA REL NFKB1
GGCUCAG	1.924
POU1F1.p2	1.889	POU1F1
POU2F1..3.p2	1.885	POU2F2 POU2F1 POU2F3
GTF2A1,2.p2	1.883	GTF2A1 GTF2A2
ETS1,2.p2	1.874	ETS2 ETS1
DBP.p2	1.860	DBP
PPARG.p2	1.838	PPARG
KLF12.p2	1.822	KLF12
REST.p3	1.815	REST
NFE2L1.p2	1.809	NFE2L1
CUUUGGU	1.788
EVI1.p2	1.784	EVI1
GAGGUAG	1.723
RUNX1..3.p2	1.711	RUNX1 RUNX3 RUNX2
NR1H4.p2	1.704	NR1H4
NHLH1,2.p2	1.695	NHLH1 NHLH2
NKX2-1,4.p2	1.682	NKX2-1 NKX2-4
GTF2I.p2	1.653	GTF2I
MAZ.p2	1.612	MAZ
NKX2-3_NKX2-5.p2	1.539	NKX2-5 NKX2-3
GGCAGUG	1.511
NKX3-1.p2	1.503	NKX3-1
HOX{A5,B5}.p2	1.489	HOXB5 HOXA5
TFEB.p2	1.480	TFEB
UAUUGCU	1.466
ZEB1.p2	1.437	ZEB1
ATF2.p2	1.425	ATF2
RXR{A,B,G}.p2	1.416	RXRA RXRB RXRG
TBX4,5.p2	1.366	TBX5 TBX4
RORA.p2	1.359	RORA
FOX{D1,D2}.p2	1.334	FOXD2 FOXD1
TFCP2.p2	1.311	TFCP2
GGCAAGA	1.286
MSX1,2.p2	1.258	MSX1 MSX2
POU3F1..4.p2	1.256	POU3F1 POU3F3 POU3F2 POU3F4
ESR1.p2	1.251	ESR1
SP1.p2	1.249	SP1
TFAP2{A,C}.p2	1.241	TFAP2C TFAP2A
TCF4_dimer.p2	1.229	TCF4
HOXA9_MEIS1.p2	1.184	MEIS1 HOXA9
GGAAGAC	1.140
UUGGCAC	1.121
IKZF1.p2	1.111	IKZF1
HBP1_HMGB_SSRP1_UBTF.p2	1.075	HMGB2 HMGB3 SSRP1 UBTF HBP1
POU5F1.p2	1.074	POU5F1
EWSR1-FLI1.p2	1.066	FLI1 EWSR1
AGCAGCA	1.017
AR.p2	0.977	AR
GAGAACU	0.938
FOX{F1,F2,J1}.p2	0.931	FOXF2 FOXJ1 FOXF1
SPZ1.p2	0.896	SPZ1
UGAAAUG	0.883
CCAGCAU	0.874
AAUGCCC	0.873
GAUCAGA	0.871
NFIL3.p2	0.814	NFIL3
ZNF238.p2	0.793	ZNF238
GGACGGA	0.779
HSF1,2.p2	0.770	HSF1 HSF2
STAT5{A,B}.p2	0.761	STAT5B STAT5A
TP53.p2	0.719	TP53
UGCAUUG	0.698
AGCAGCG	0.697
EOMES.p2	0.677	EOMES
SREBF1,2.p2	0.650	SREBF1 SREBF2
RXRA_VDR{dimer}.p2	0.639	VDR	$logo of RXRA_VDR{dimer}.p2$
ACUGGCC	0.615
CGUGUCU	0.613
UGCAUAG	0.603
ONECUT1,2.p2	0.599	ONECUT2 ONECUT1
GUAGUGU	0.596
FOXO1,3,4.p2	0.539	FOXO1 FOXO4 FOXO3
CCAGUGU	0.532
VSX1,2.p2	0.526	VSX2 VSX1
ACCCUGU	0.516
STAT1,3.p3	0.514	STAT1 STAT3
AUGACAC	0.498
ZNF423.p2	0.473	ZNF423
UUUUUGC	0.470
AAGGCAC	0.445
ZFP161.p2	0.432	ZFP161
SOX5.p2	0.415	SOX5
POU6F1.p2	0.365	POU6F1
HMGA1,2.p2	0.365	HMGA1 HMGA2
EP300.p2	0.328	EP300
FEV.p2	0.314	FEV
GATA1..3.p2	0.314	GATA1 GATA2 GATA3
GAUUGUC	0.302
NR6A1.p2	0.302	NR6A1
GGAGUGU	0.273
AIRE.p2	0.262	AIRE
PATZ1.p2	0.256	PATZ1
SRF.p3	0.251	SRF
AUGUGCC	0.222
UUGGUCC	0.220
AAGUGCU	0.208
PAX3,7.p2	0.206	PAX7 PAX3
TAL1_TCF{3,4,12}.p2	0.192	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GFI1B.p2	0.185	GFI1B
GLI1..3.p2	0.183	GLI1 GLI2 GLI3
RFX1..5_RFXANK_RFXAP.p2	0.170	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
NANOG.p2	0.155	NANOG
CCUUCAU	0.145
LMO2.p2	0.114	LMO2
PAX6.p2	0.114	PAX6
T.p2	0.095	T
PDX1.p2	0.089	PDX1
UAAGACU	0.087
PAX8.p2	0.083	PAX8
UCACAGU	0.068
UGUGCGU	0.068
DMAP1_NCOR{1,2}_SMARC.p2	0.063	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AAUCUCA	0.044
PAX2.p2	0.027	PAX2
AAUCUCU	-0.004
ZIC1..3.p2	-0.019	ZIC1 ZIC2 ZIC3
AACGGAA	-0.022
ACCCGUA	-0.032
CGUACCG	-0.037
MEF2{A,B,C,D}.p2	-0.037	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
LHX3,4.p2	-0.054	LHX3 LHX4
BPTF.p2	-0.057	BPTF
AACAGUC	-0.073
CUACAGU	-0.087
RBPJ.p2	-0.094	RBPJ
UGACCUA	-0.118
STAT2,4,6.p2	-0.134	STAT2 STAT4 STAT6
LEF1_TCF7_TCF7L1,2.p2	-0.140	TCF7 TCF7L2 LEF1 TCF7L1
ARID5B.p2	-0.144	ARID5B
HOX{A6,A7,B6,B7}.p2	-0.154	HOXB6 HOXA7 HOXB7 HOXA6
AAGGUGC	-0.196
FOXD3.p2	-0.202	FOXD3
UGUGCUU	-0.217
ACAGUAU	-0.219
HMX1.p2	-0.244	HMX1
UAAUGCU	-0.284
ATF6.p2	-0.319	ATF6
POU5F1_SOX2{dimer}.p2	-0.325	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
bHLH_family.p2	-0.337	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
AHR_ARNT_ARNT2.p2	-0.353	ARNT AHR ARNT2
PRDM1.p3	-0.354	PRDM1
GZF1.p2	-0.383	GZF1
GCAGCAU	-0.401
CDC5L.p2	-0.404	CDC5L
AUGGCUU	-0.406
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.406	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ESRRA.p2	-0.407	ESRRA
AACCGUU	-0.416
UAAGACG	-0.453
FOX{I1,J2}.p2	-0.455	FOXI1 FOXJ2
NR3C1.p2	-0.466	NR3C1
GAUAUGU	-0.475
ALX1.p2	-0.478	ALX1
ZNF384.p2	-0.481	ZNF384
SRY.p2	-0.488	SRY
GUAACAG	-0.489
TFAP4.p2	-0.512	TFAP4
AGCUUAU	-0.512
CUX2.p2	-0.550	CUX2
MYBL2.p2	-0.564	MYBL2
AGUGCAA	-0.578
FOXQ1.p2	-0.592	FOXQ1
AGCUGCC	-0.603
IRF1,2,7.p3	-0.633	IRF1 IRF2 IRF7
AUUGCAC	-0.663
TFAP2B.p2	-0.678	TFAP2B
ACUGCAU	-0.735
SOX{8,9,10}.p2	-0.752	SOX9 SOX8 SOX10
ZBTB6.p2	-0.758	ZBTB6
AUGGCAC	-0.800
TLX2.p2	-0.808	TLX2
GCUACAU	-0.810
UCCAGUU	-0.812
FOXL1.p2	-0.852	FOXL1
GUGCAAA	-0.873
GUCAGUU	-0.906
PBX1.p2	-0.931	PBX1
AACCUGG	-0.996
BACH2.p2	-1.011	BACH2
AGGUAGU	-1.046
CEBPA,B_DDIT3.p2	-1.050	DDIT3 CEBPA CEBPB
NFATC1..3.p2	-1.102	NFATC3 NFATC2 NFATC1
ACAGUAC	-1.106
NKX6-1,2.p2	-1.144	NKX6-1 NKX6-2
RXRG_dimer.p3	-1.149	NR1H2 RXRA PPARG PPARA RXRB RXRG
FOXN1.p2	-1.217	FOXN1
GCUGGUG	-1.256
PITX1..3.p2	-1.286	PITX2 PITX3 PITX1
CDX1,2,4.p2	-1.314	CDX1 CDX2 CDX4
MZF1.p2	-1.369	MZF1
UUGGCAA	-1.389
IKZF2.p2	-1.470	IKZF2
SOX2.p2	-1.552	SOX2
AACACUG	-1.617
SPIB.p2	-1.634	SPIB
CTCF.p2	-1.647	CTCF
CREB1.p2	-1.653	CREB1
PAX4.p2	-1.697	PAX4
CAGUGCA	-1.835
NFE2.p2	-1.942	NFE2
MAFB.p2	-2.094	MAFB
HIF1A.p2	-2.098	HIF1A
NKX2-2,8.p2	-2.153	NKX2-2 NKX2-8
KLF4.p3	-2.170	KLF4
ACAUUCA	-2.195
XBP1.p3	-2.217	XBP1
ZBTB16.p2	-2.266	ZBTB16
EGR1..3.p2	-2.282	EGR3 EGR1 EGR2
SOX17.p2	-2.287	SOX17
HES1.p2	-2.317	HES1
AGCACCA	-2.319
AGUGGUU	-2.368
NFE2L2.p2	-2.423	NFE2L2
UCACAUU	-2.545
ATF4.p2	-2.575	ATF4
SPI1.p2	-2.582	SPI1
PRRX1,2.p2	-2.661	PRRX2 PRRX1
UCAAGUA	-2.678
NFY{A,B,C}.p2	-2.702	NFYC NFYB NFYA
PAX5.p2	-2.741	PAX5
GUAAACA	-2.747
HOX{A4,D4}.p2	-2.784	HOXA4 HOXD4
NKX3-2.p2	-2.846	NKX3-2
AAUACUG	-2.947
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.004	ARNT MAX MYC USF1 BHLHB2 ARNT2
GFI1.p2	-3.064	GFI1
ZNF148.p2	-3.168	ZNF148
EHF.p2	-3.769	EHF
ELF1,2,4.p2	-4.420	ELF2 ELF1 ELF4
GGAAUGU	-4.814
ATF5_CREB3.p2	-5.843	ATF5 CREB3
ELK1,4_GABP{A,B1}.p3	-6.490	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	-6.964	MYB
ZNF143.p2	-7.213	ZNF143
YY1.p2	-7.503	YY1
E2F1..5.p2	-8.555	E2F4 E2F5 E2F2 E2F1 E2F3
TFDP1.p2	-8.608	TFDP1
NRF1.p2	-9.104	NRF1

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Sample name: GNF_1_kidney

Sorted z-values for every WM.