ISMARA results: GNF_1

Sample name: GNF_1_testis

Sorted Z-values histogram for the sample GNF_1_testis

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
MYB.p2	16.824	MYB
RFX1..5_RFXANK_RFXAP.p2	7.538	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
KLF12.p2	3.447	KLF12
JUN.p2	3.372	JUN JUND JUNB
PITX1..3.p2	3.198	PITX2 PITX3 PITX1
RREB1.p2	3.054	RREB1
GATA6.p2	3.031	GATA6
ATF6.p2	2.967	ATF6
NR1H4.p2	2.921	NR1H4
CAGCAGG	2.678
RXR{A,B,G}.p2	2.653	RXRA RXRB RXRG
TFAP2{A,C}.p2	2.494	TFAP2C TFAP2A
NKX2-1,4.p2	2.493	NKX2-1 NKX2-4
HOX{A5,B5}.p2	2.490	HOXB5 HOXA5
POU6F1.p2	2.478	POU6F1
ZIC1..3.p2	2.407	ZIC1 ZIC2 ZIC3
GGCUCAG	2.387
HAND1,2.p2	2.368	HAND1 HAND2
NR5A1,2.p2	2.360	NR5A1 NR5A2
SRF.p3	2.358	SRF
AGCAGCA	2.332
NRF1.p2	2.328	NRF1
EN1,2.p2	2.327	EN1 EN2
MYOD1.p2	2.187	MYOD1
TCF4_dimer.p2	2.107	TCF4
GTF2A1,2.p2	2.100	GTF2A1 GTF2A2
NANOG.p2	2.068	NANOG
TFCP2.p2	1.949	TFCP2
HLF.p2	1.820	HLF
SMAD1..7,9.p2	1.811	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GAGGUAG	1.785
HIC1.p2	1.778	HIC1
PBX1.p2	1.721	PBX1
MEF2{A,B,C,D}.p2	1.719	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
EVI1.p2	1.620	EVI1
TGIF1.p2	1.589	TGIF1
RXRA_VDR{dimer}.p2	1.586	VDR	$logo of RXRA_VDR{dimer}.p2$
TBP.p2	1.584	TBP
PAX5.p2	1.515	PAX5
CDX1,2,4.p2	1.510	CDX1 CDX2 CDX4
AGCACCA	1.507
UAAUGCU	1.399
FOX{C1,C2}.p2	1.356	FOXC1 FOXC2
FOX{F1,F2,J1}.p2	1.329	FOXF2 FOXJ1 FOXF1
AAAGUGC	1.324
CUCCCAA	1.299
ZNF423.p2	1.291	ZNF423
RBPJ.p2	1.231	RBPJ
NFIL3.p2	1.197	NFIL3
NHLH1,2.p2	1.195	NHLH1 NHLH2
FOXO1,3,4.p2	1.188	FOXO1 FOXO4 FOXO3
FOXP3.p2	1.179	FOXP3
TBX4,5.p2	1.178	TBX5 TBX4
PATZ1.p2	1.174	PATZ1
REST.p3	1.164	REST
HMGA1,2.p2	1.141	HMGA1 HMGA2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.073	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZNF143.p2	1.037	ZNF143
NANOG{mouse}.p2	1.024	NANOG
STAT1,3.p3	0.995	STAT1 STAT3
ELK1,4_GABP{A,B1}.p3	0.929	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
FOX{I1,J2}.p2	0.894	FOXI1 FOXJ2
UAUUGCU	0.894
FOXQ1.p2	0.890	FOXQ1
ZNF384.p2	0.880	ZNF384
SOX2.p2	0.858	SOX2
ALX1.p2	0.840	ALX1
TEAD1.p2	0.828	TEAD1 TEAD2 TEAD3 TEAD4
GAUUGUC	0.794
ACCCUGU	0.786
NR3C1.p2	0.768	NR3C1
CGUGUCU	0.732
T.p2	0.724	T
CREB1.p2	0.703	CREB1
SP1.p2	0.676	SP1
CGUACCG	0.676
DBP.p2	0.668	DBP
GGACGGA	0.646
RORA.p2	0.614	RORA
MAZ.p2	0.585	MAZ
GGCAGUG	0.564
AGCUGCC	0.539
ATF2.p2	0.525	ATF2
ARID5B.p2	0.510	ARID5B
CCCUGAG	0.505
UAAGACU	0.450
MYBL2.p2	0.429	MYBL2
ZBTB6.p2	0.424	ZBTB6
CACAGUG	0.416
HOX{A6,A7,B6,B7}.p2	0.394	HOXB6 HOXA7 HOXB7 HOXA6
GAGAUGA	0.389
SPZ1.p2	0.337	SPZ1
SNAI1..3.p2	0.330	SNAI2 SNAI1 SNAI3
VSX1,2.p2	0.329	VSX2 VSX1
CUUUGGU	0.324
UUGGCAA	0.320
GGCAAGA	0.315
EOMES.p2	0.310	EOMES
AACGGAA	0.297
EP300.p2	0.289	EP300
FOS_FOS{B,L1}_JUN{B,D}.p2	0.277	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
MSX1,2.p2	0.261	MSX1 MSX2
LMO2.p2	0.257	LMO2
RUNX1..3.p2	0.250	RUNX1 RUNX3 RUNX2
SOX17.p2	0.240	SOX17
GAUCAGA	0.230
NKX2-3_NKX2-5.p2	0.222	NKX2-5 NKX2-3
POU1F1.p2	0.216	POU1F1
GAGAACU	0.206
AAGGUGC	0.193
GAUAUGU	0.174
AIRE.p2	0.147	AIRE
POU3F1..4.p2	0.138	POU3F1 POU3F3 POU3F2 POU3F4
UAAGACG	0.137
HOXA9_MEIS1.p2	0.133	MEIS1 HOXA9
HNF1A.p2	0.124	HNF1A
UGUGCGU	0.110
AGUGCAA	0.104
HNF4A_NR2F1,2.p2	0.088	NR2F1 NR2F2 HNF4A
UUGUUCG	0.084
PDX1.p2	0.080	PDX1
ONECUT1,2.p2	0.076	ONECUT2 ONECUT1
CCAGUGU	0.075
GZF1.p2	0.060	GZF1
LEF1_TCF7_TCF7L1,2.p2	0.035	TCF7 TCF7L2 LEF1 TCF7L1
FOSL2.p2	0.031	FOSL2
IKZF2.p2	0.030	IKZF2
ACCCGUA	0.020
PAX8.p2	0.010	PAX8
GUAACAG	0.005
PAX3,7.p2	0.004	PAX7 PAX3
NFY{A,B,C}.p2	-0.025	NFYC NFYB NFYA
NFIX.p2	-0.051	NFIX
GUAAACA	-0.091
KLF4.p3	-0.094	KLF4
SOX5.p2	-0.100	SOX5
NKX2-2,8.p2	-0.135	NKX2-2 NKX2-8
PAX4.p2	-0.139	PAX4
CRX.p2	-0.156	CRX
EHF.p2	-0.157	EHF
SOX{8,9,10}.p2	-0.165	SOX9 SOX8 SOX10
PAX6.p2	-0.167	PAX6
SRY.p2	-0.171	SRY
GGAAGAC	-0.180
NKX6-1,2.p2	-0.184	NKX6-1 NKX6-2
EWSR1-FLI1.p2	-0.190	FLI1 EWSR1
TLX1..3_NFIC{dimer}.p2	-0.198	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ACAUUCA	-0.199
NFE2L1.p2	-0.221	NFE2L1
AACCUGG	-0.232
UGACCUA	-0.249
GCUACAU	-0.251
FEV.p2	-0.259	FEV
ACUGGCC	-0.277
AR.p2	-0.287	AR
AGCAGCG	-0.293
GCUGGUG	-0.293
SREBF1,2.p2	-0.300	SREBF1 SREBF2
EBF1.p2	-0.321	EBF1
AUGUGCC	-0.330
AAGUGCU	-0.331
FOXA2.p3	-0.349	FOXA2
AACCGUU	-0.363
AGCUUAU	-0.373
FOXL1.p2	-0.403	FOXL1
PAX2.p2	-0.406	PAX2
GLI1..3.p2	-0.408	GLI1 GLI2 GLI3
TFAP4.p2	-0.413	TFAP4
ACUGCAU	-0.418
ACAGUAC	-0.428
NR6A1.p2	-0.469	NR6A1
HMX1.p2	-0.507	HMX1
LHX3,4.p2	-0.534	LHX3 LHX4
CCAGCAU	-0.534
HES1.p2	-0.547	HES1
GUGCAAA	-0.554
ADNP_IRX_SIX_ZHX.p2	-0.574	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
POU5F1_SOX2{dimer}.p2	-0.576	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CAGUGCA	-0.585
CUACAGU	-0.589
CUX2.p2	-0.596	CUX2
AUGACAC	-0.614
MYFfamily.p2	-0.619	MYOD1 MYF6 MYF5 MYOG
AAGGCAC	-0.626
GGAGUGU	-0.630
GUCAGUU	-0.633
ESR1.p2	-0.633	ESR1
UUGGCAC	-0.637
AGGUAGU	-0.646
AACAGUC	-0.652
FOX{D1,D2}.p2	-0.657	FOXD2 FOXD1
HSF1,2.p2	-0.659	HSF1 HSF2
HBP1_HMGB_SSRP1_UBTF.p2	-0.669	HMGB2 HMGB3 SSRP1 UBTF HBP1
UGCAUAG	-0.677
AAUCUCA	-0.692
ZNF238.p2	-0.692	ZNF238
AUGGCUU	-0.704
ACAGUAU	-0.755
FOXN1.p2	-0.755	FOXN1
TP53.p2	-0.756	TP53
AUGGCAC	-0.765
UGCAUUG	-0.772
UGUGCUU	-0.775
PPARG.p2	-0.793	PPARG
UCCCUUU	-0.793
CDC5L.p2	-0.819	CDC5L
HIF1A.p2	-0.860	HIF1A
MTF1.p2	-0.882	MTF1
GUAGUGU	-0.901
GFI1B.p2	-0.902	GFI1B
CCUUCAU	-0.912
AAUCUCU	-0.913
RXRG_dimer.p3	-0.927	NR1H2 RXRA PPARG PPARA RXRB RXRG
UCCAGUU	-0.985
NR4A2.p2	-1.007	NR4A2
POU2F1..3.p2	-1.011	POU2F2 POU2F1 POU2F3
NKX3-1.p2	-1.101	NKX3-1
IKZF1.p2	-1.110	IKZF1
UCACAGU	-1.115
AUUGCAC	-1.122
BPTF.p2	-1.168	BPTF
NFATC1..3.p2	-1.170	NFATC3 NFATC2 NFATC1
UUGGUCC	-1.181
HOX{A4,D4}.p2	-1.232	HOXA4 HOXD4
NFE2L2.p2	-1.234	NFE2L2
AAUGCCC	-1.264
ZEB1.p2	-1.302	ZEB1
CEBPA,B_DDIT3.p2	-1.316	DDIT3 CEBPA CEBPB
ZBTB16.p2	-1.319	ZBTB16
UGAAAUG	-1.406
ZNF148.p2	-1.424	ZNF148
STAT5{A,B}.p2	-1.464	STAT5B STAT5A
GATA1..3.p2	-1.467	GATA1 GATA2 GATA3
GCAGCAU	-1.492
TLX2.p2	-1.498	TLX2
MZF1.p2	-1.612	MZF1
ZFP161.p2	-1.625	ZFP161
AACACUG	-1.628
TAL1_TCF{3,4,12}.p2	-1.630	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
DMAP1_NCOR{1,2}_SMARC.p2	-1.748	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CTCF.p2	-1.780	CTCF
UCACAUU	-1.833
ESRRA.p2	-1.921	ESRRA
TFAP2B.p2	-1.922	TFAP2B
BACH2.p2	-1.928	BACH2
ETS1,2.p2	-1.976	ETS2 ETS1
UCAAGUA	-1.994
MAFB.p2	-2.001	MAFB
AGUGGUU	-2.089
PRDM1.p3	-2.135	PRDM1
POU5F1.p2	-2.181	POU5F1
GFI1.p2	-2.195	GFI1
NFE2.p2	-2.233	NFE2
AAUACUG	-2.241
EGR1..3.p2	-2.248	EGR3 EGR1 EGR2
TFDP1.p2	-2.293	TFDP1
bHLH_family.p2	-2.381	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
TFEB.p2	-2.420	TFEB
NFKB1_REL_RELA.p2	-2.538	RELA REL NFKB1
STAT2,4,6.p2	-2.633	STAT2 STAT4 STAT6
PRRX1,2.p2	-2.681	PRRX2 PRRX1
ATF4.p2	-2.841	ATF4
XBP1.p3	-2.989	XBP1
AHR_ARNT_ARNT2.p2	-3.169	ARNT AHR ARNT2
UUUUUGC	-3.231
NKX3-2.p2	-3.287	NKX3-2
SPIB.p2	-3.334	SPIB
SPI1.p2	-3.478	SPI1
IRF1,2,7.p3	-3.538	IRF1 IRF2 IRF7
FOXD3.p2	-3.565	FOXD3
GTF2I.p2	-3.574	GTF2I
YY1.p2	-3.754	YY1
GGAAUGU	-3.802
E2F1..5.p2	-4.078	E2F4 E2F5 E2F2 E2F1 E2F3
ATF5_CREB3.p2	-4.782	ATF5 CREB3
ELF1,2,4.p2	-4.990	ELF2 ELF1 ELF4

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Sample name: GNF_1_testis

Sorted z-values for every WM.