ISMARA results: GNF_2

Sample name: GNF_2_AdrenalCortex

Sorted Z-values histogram for the sample GNF_2_AdrenalCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	8.373
UUUUUGC	4.839
MYFfamily.p2	4.751	MYOD1 MYF6 MYF5 MYOG
TFCP2.p2	4.557	TFCP2
TLX1..3_NFIC{dimer}.p2	4.375	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
MTF1.p2	4.243	MTF1
RREB1.p2	4.175	RREB1
TBP.p2	3.988	TBP
RXR{A,B,G}.p2	3.945	RXRA RXRB RXRG
GATA6.p2	3.859	GATA6
REST.p3	3.755	REST
HNF4A_NR2F1,2.p2	3.581	NR2F1 NR2F2 HNF4A
TEAD1.p2	3.243	TEAD1 TEAD2 TEAD3 TEAD4
GTF2A1,2.p2	3.027	GTF2A1 GTF2A2
HIC1.p2	2.794	HIC1
EN1,2.p2	2.761	EN1 EN2
TGIF1.p2	2.746	TGIF1
POU1F1.p2	2.740	POU1F1
HMX1.p2	2.728	HMX1
TBX4,5.p2	2.709	TBX5 TBX4
MYOD1.p2	2.707	MYOD1
STAT2,4,6.p2	2.694	STAT2 STAT4 STAT6
HOX{A5,B5}.p2	2.606	HOXB5 HOXA5
TFAP4.p2	2.583	TFAP4
ZIC1..3.p2	2.554	ZIC1 ZIC2 ZIC3
ZNF423.p2	2.531	ZNF423
EVI1.p2	2.487	EVI1
CCCUGAG	2.461
TFEB.p2	2.420	TFEB
SNAI1..3.p2	2.360	SNAI2 SNAI1 SNAI3
CAGCAGG	2.314
SMAD1..7,9.p2	2.307	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
NKX2-3_NKX2-5.p2	2.197	NKX2-5 NKX2-3
SRF.p3	2.188	SRF
LEF1_TCF7_TCF7L1,2.p2	2.180	TCF7 TCF7L2 LEF1 TCF7L1
UCCCUUU	2.142
JUN.p2	2.079	JUN JUND JUNB
GATA1..3.p2	2.022	GATA1 GATA2 GATA3
STAT1,3.p3	1.963	STAT1 STAT3
RXRA_VDR{dimer}.p2	1.831	VDR	$logo of RXRA_VDR{dimer}.p2$
GGCAGUG	1.831
NANOG{mouse}.p2	1.705	NANOG
MAZ.p2	1.689	MAZ
CACAGUG	1.677
TLX2.p2	1.670	TLX2
GAGGUAG	1.669
NR1H4.p2	1.651	NR1H4
GGCUCAG	1.647
HNF1A.p2	1.612	HNF1A
ATF6.p2	1.589	ATF6
CGUGUCU	1.589
NFE2L1.p2	1.564	NFE2L1
RFX1..5_RFXANK_RFXAP.p2	1.470	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
NR3C1.p2	1.468	NR3C1
KLF12.p2	1.464	KLF12
ATF5_CREB3.p2	1.434	ATF5 CREB3
AUGGCUU	1.428
CCAGCAU	1.351
AAAGUGC	1.345
EBF1.p2	1.339	EBF1
UAUUGCU	1.318
IKZF1.p2	1.317	IKZF1
NR6A1.p2	1.309	NR6A1
ALX1.p2	1.207	ALX1
FOXL1.p2	1.185	FOXL1
HAND1,2.p2	1.178	HAND1 HAND2
UUGUUCG	1.152
FOXP3.p2	1.125	FOXP3
RORA.p2	1.101	RORA
SRY.p2	1.082	SRY
ACCCUGU	1.078
GFI1B.p2	1.072	GFI1B
NKX2-1,4.p2	1.065	NKX2-1 NKX2-4
HBP1_HMGB_SSRP1_UBTF.p2	1.004	HMGB2 HMGB3 SSRP1 UBTF HBP1
FEV.p2	1.003	FEV
LHX3,4.p2	0.976	LHX3 LHX4
RBPJ.p2	0.956	RBPJ
NR5A1,2.p2	0.940	NR5A1 NR5A2
HES1.p2	0.919	HES1
UGAAAUG	0.901
AUUGCAC	0.865
MZF1.p2	0.840	MZF1
DBP.p2	0.827	DBP
AAUCUCU	0.824
AAGGUGC	0.805
HLF.p2	0.794	HLF
FOSL2.p2	0.780	FOSL2
FOXQ1.p2	0.772	FOXQ1
FOXA2.p3	0.759	FOXA2
GAUUGUC	0.737
PAX3,7.p2	0.702	PAX7 PAX3
POU3F1..4.p2	0.690	POU3F1 POU3F3 POU3F2 POU3F4
TFAP2{A,C}.p2	0.658	TFAP2C TFAP2A
AAUGCCC	0.628
AIRE.p2	0.620	AIRE
PITX1..3.p2	0.605	PITX2 PITX3 PITX1
VSX1,2.p2	0.604	VSX2 VSX1
GZF1.p2	0.597	GZF1
NFATC1..3.p2	0.592	NFATC3 NFATC2 NFATC1
CREB1.p2	0.588	CREB1
ZNF384.p2	0.584	ZNF384
GGACGGA	0.576
GTF2I.p2	0.564	GTF2I
AGCAGCG	0.538
TCF4_dimer.p2	0.534	TCF4
MSX1,2.p2	0.508	MSX1 MSX2
AHR_ARNT_ARNT2.p2	0.498	ARNT AHR ARNT2
FOS_FOS{B,L1}_JUN{B,D}.p2	0.494	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AAGGCAC	0.487
HSF1,2.p2	0.476	HSF1 HSF2
FOXD3.p2	0.475	FOXD3
NANOG.p2	0.474	NANOG
GAGAACU	0.459
GLI1..3.p2	0.443	GLI1 GLI2 GLI3
NFKB1_REL_RELA.p2	0.432	RELA REL NFKB1
AUGACAC	0.407
ZEB1.p2	0.398	ZEB1
GGCAAGA	0.393
HOXA9_MEIS1.p2	0.392	MEIS1 HOXA9
FOXO1,3,4.p2	0.382	FOXO1 FOXO4 FOXO3
TAL1_TCF{3,4,12}.p2	0.367	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
POU6F1.p2	0.364	POU6F1
POU2F1..3.p2	0.340	POU2F2 POU2F1 POU2F3
ACAGUAC	0.317
AUGUGCC	0.312
EOMES.p2	0.296	EOMES
UAAGACU	0.270
AACACUG	0.263
UGUGCUU	0.262
GAUCAGA	0.250
GUAGUGU	0.250
ETS1,2.p2	0.246	ETS2 ETS1
CCUUCAU	0.243
PAX8.p2	0.239	PAX8
POU5F1_SOX2{dimer}.p2	0.217	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CGUACCG	0.215
UGUGCGU	0.210
POU5F1.p2	0.188	POU5F1
NFIL3.p2	0.181	NFIL3
AACGGAA	0.178
CUACAGU	0.128
AAGUGCU	0.127
ESR1.p2	0.125	ESR1
UAAUGCU	0.108
FOX{C1,C2}.p2	0.107	FOXC1 FOXC2
UGCAUUG	0.105
HMGA1,2.p2	0.103	HMGA1 HMGA2
UUGGCAA	0.100
STAT5{A,B}.p2	0.088	STAT5B STAT5A
CCAGUGU	0.087
PAX6.p2	0.063	PAX6
FOX{I1,J2}.p2	0.055	FOXI1 FOXJ2
AAUCUCA	0.051
ACUGGCC	0.031
UUGGCAC	0.030
AR.p2	0.009	AR
CUUUGGU	-0.018
GAGAUGA	-0.028
ACCCGUA	-0.034
AGCAGCA	-0.042
UCACAGU	-0.080
CDC5L.p2	-0.087	CDC5L
CRX.p2	-0.099	CRX
SOX{8,9,10}.p2	-0.100	SOX9 SOX8 SOX10
AACCUGG	-0.101
ACAGUAU	-0.114
FOX{D1,D2}.p2	-0.120	FOXD2 FOXD1
NKX6-1,2.p2	-0.131	NKX6-1 NKX6-2
UGACCUA	-0.150
RUNX1..3.p2	-0.161	RUNX1 RUNX3 RUNX2
UGCAUAG	-0.187
NKX3-1.p2	-0.200	NKX3-1
FOX{F1,F2,J1}.p2	-0.207	FOXF2 FOXJ1 FOXF1
ZNF238.p2	-0.227	ZNF238
MYBL2.p2	-0.249	MYBL2
AACCGUU	-0.250
PDX1.p2	-0.251	PDX1
CTCF.p2	-0.280	CTCF
SPZ1.p2	-0.313	SPZ1
AGCACCA	-0.316
NR4A2.p2	-0.327	NR4A2
GGAGUGU	-0.340
IKZF2.p2	-0.347	IKZF2
AGCUGCC	-0.371
CEBPA,B_DDIT3.p2	-0.389	DDIT3 CEBPA CEBPB
PPARG.p2	-0.390	PPARG
GCUGGUG	-0.406
ZBTB6.p2	-0.415	ZBTB6
ONECUT1,2.p2	-0.424	ONECUT2 ONECUT1
HOX{A6,A7,B6,B7}.p2	-0.434	HOXB6 HOXA7 HOXB7 HOXA6
GUCAGUU	-0.447
GAUAUGU	-0.456
GCUACAU	-0.542
SOX5.p2	-0.543	SOX5
ATF2.p2	-0.582	ATF2
AGCUUAU	-0.596
ACUGCAU	-0.607
AGUGCAA	-0.608
RXRG_dimer.p3	-0.622	NR1H2 RXRA PPARG PPARA RXRB RXRG
SP1.p2	-0.664	SP1
UUGGUCC	-0.666
EGR1..3.p2	-0.671	EGR3 EGR1 EGR2
ACAUUCA	-0.672
AAUACUG	-0.700
EWSR1-FLI1.p2	-0.706	FLI1 EWSR1
PRDM1.p3	-0.706	PRDM1
SOX17.p2	-0.730	SOX17
CAGUGCA	-0.777
GUAAACA	-0.783
PRRX1,2.p2	-0.791	PRRX2 PRRX1
CUX2.p2	-0.875	CUX2
GUAACAG	-0.916
ZBTB16.p2	-0.927	ZBTB16
NFE2L2.p2	-0.929	NFE2L2
BPTF.p2	-0.936	BPTF
UAAGACG	-0.951
UCAAGUA	-0.964
FOXN1.p2	-0.965	FOXN1
GGAAGAC	-1.019
PATZ1.p2	-1.022	PATZ1
AGGUAGU	-1.030
TP53.p2	-1.035	TP53
MEF2{A,B,C,D}.p2	-1.039	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
ARID5B.p2	-1.126	ARID5B
NFIX.p2	-1.134	NFIX
ADNP_IRX_SIX_ZHX.p2	-1.150	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GUGCAAA	-1.155
PAX2.p2	-1.201	PAX2
TFAP2B.p2	-1.202	TFAP2B
HOX{A4,D4}.p2	-1.207	HOXA4 HOXD4
NFE2.p2	-1.231	NFE2
IRF1,2,7.p3	-1.239	IRF1 IRF2 IRF7
T.p2	-1.288	T
bHLH_family.p2	-1.335	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
CDX1,2,4.p2	-1.346	CDX1 CDX2 CDX4
AACAGUC	-1.363
NHLH1,2.p2	-1.398	NHLH1 NHLH2
ZNF148.p2	-1.462	ZNF148
UCCAGUU	-1.467
SREBF1,2.p2	-1.489	SREBF1 SREBF2
XBP1.p3	-1.529	XBP1
PAX4.p2	-1.532	PAX4
NKX2-2,8.p2	-1.596	NKX2-2 NKX2-8
NKX3-2.p2	-1.646	NKX3-2
AUGGCAC	-1.649
SPIB.p2	-1.661	SPIB
GFI1.p2	-1.662	GFI1
LMO2.p2	-1.666	LMO2
DMAP1_NCOR{1,2}_SMARC.p2	-1.687	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
KLF4.p3	-1.695	KLF4
AGUGGUU	-1.816
EP300.p2	-1.884	EP300
PBX1.p2	-2.007	PBX1
GCAGCAU	-2.016
ZFP161.p2	-2.223	ZFP161
UCACAUU	-2.235
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-2.249	ARNT MAX MYC USF1 BHLHB2 ARNT2
ESRRA.p2	-2.251	ESRRA
PAX5.p2	-2.252	PAX5
BACH2.p2	-2.276	BACH2
MAFB.p2	-2.492	MAFB
SPI1.p2	-2.804	SPI1
SOX2.p2	-3.008	SOX2
NFY{A,B,C}.p2	-3.115	NFYC NFYB NFYA
GGAAUGU	-3.419
ELF1,2,4.p2	-3.485	ELF2 ELF1 ELF4
EHF.p2	-3.539	EHF
HIF1A.p2	-3.583	HIF1A
ATF4.p2	-4.756	ATF4
TFDP1.p2	-5.184	TFDP1
ELK1,4_GABP{A,B1}.p3	-5.477	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	-5.875	MYB
ZNF143.p2	-6.479	ZNF143
NRF1.p2	-6.729	NRF1
E2F1..5.p2	-7.475	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	-10.059	YY1

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Sample name: GNF_2_AdrenalCortex

Sorted z-values for every WM.