ISMARA results: GNF_2

Sample name: GNF_2_Amygdala

Sorted Z-values histogram for the sample GNF_2_Amygdala

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	6.507	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	6.343	REST
MAFB.p2	5.959	MAFB
EGR1..3.p2	5.630	EGR3 EGR1 EGR2
HOX{A6,A7,B6,B7}.p2	5.380	HOXB6 HOXA7 HOXB7 HOXA6
HIC1.p2	5.205	HIC1
ATF2.p2	4.674	ATF2
UGUGCUU	4.541
ZFP161.p2	4.385	ZFP161
MYOD1.p2	4.192	MYOD1
NHLH1,2.p2	4.174	NHLH1 NHLH2
SOX2.p2	4.144	SOX2
AAUACUG	4.058
KLF12.p2	3.704	KLF12
TGIF1.p2	3.650	TGIF1
GTF2I.p2	3.480	GTF2I
ZIC1..3.p2	3.399	ZIC1 ZIC2 ZIC3
TCF4_dimer.p2	3.219	TCF4
GATA1..3.p2	3.185	GATA1 GATA2 GATA3
DBP.p2	3.141	DBP
GGCAGUG	2.943
ZBTB6.p2	2.912	ZBTB6
ACAUUCA	2.842
AGUGCAA	2.829
GUAAACA	2.737
GUCAGUU	2.715
UUGGUCC	2.664
MZF1.p2	2.662	MZF1
RREB1.p2	2.651	RREB1
UGCAUAG	2.619
FOX{I1,J2}.p2	2.559	FOXI1 FOXJ2
SRY.p2	2.538	SRY
MEF2{A,B,C,D}.p2	2.532	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TFAP2B.p2	2.497	TFAP2B
MTF1.p2	2.463	MTF1
IKZF2.p2	2.461	IKZF2
GUGCAAA	2.312
NFIX.p2	2.301	NFIX
UAAGACG	2.229
TAL1_TCF{3,4,12}.p2	2.185	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UUGGCAC	2.160
SPZ1.p2	2.056	SPZ1
STAT2,4,6.p2	2.037	STAT2 STAT4 STAT6
ALX1.p2	1.960	ALX1
EWSR1-FLI1.p2	1.960	FLI1 EWSR1
AUGGCUU	1.949
TFEB.p2	1.942	TFEB
JUN.p2	1.858	JUN JUND JUNB
PAX2.p2	1.850	PAX2
AUUGCAC	1.836
HSF1,2.p2	1.831	HSF1 HSF2
AAGUGCU	1.819
CTCF.p2	1.796	CTCF
PRRX1,2.p2	1.777	PRRX2 PRRX1
ATF5_CREB3.p2	1.690	ATF5 CREB3
POU5F1.p2	1.684	POU5F1
EVI1.p2	1.670	EVI1
SOX{8,9,10}.p2	1.641	SOX9 SOX8 SOX10
SMAD1..7,9.p2	1.636	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
LMO2.p2	1.596	LMO2
TFCP2.p2	1.568	TFCP2
CEBPA,B_DDIT3.p2	1.565	DDIT3 CEBPA CEBPB
ESRRA.p2	1.550	ESRRA
HMGA1,2.p2	1.524	HMGA1 HMGA2
POU5F1_SOX2{dimer}.p2	1.515	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NR5A1,2.p2	1.514	NR5A1 NR5A2
UGAAAUG	1.458
GCUACAU	1.420
GAUCAGA	1.366
AUGGCAC	1.365
MAZ.p2	1.364	MAZ
UAUUGCU	1.354
AGCAGCA	1.304
TBX4,5.p2	1.279	TBX5 TBX4
UAAGACU	1.267
HOX{A5,B5}.p2	1.215	HOXB5 HOXA5
GFI1.p2	1.189	GFI1
NFIL3.p2	1.135	NFIL3
UCACAGU	1.110
GGAAUGU	1.055
ZNF423.p2	1.049	ZNF423
PAX4.p2	1.048	PAX4
EBF1.p2	1.009	EBF1
NKX3-1.p2	0.939	NKX3-1
AGGUAGU	0.928
EOMES.p2	0.921	EOMES
AACACUG	0.916
MYFfamily.p2	0.904	MYOD1 MYF6 MYF5 MYOG
AAAGUGC	0.891
SREBF1,2.p2	0.873	SREBF1 SREBF2
HBP1_HMGB_SSRP1_UBTF.p2	0.873	HMGB2 HMGB3 SSRP1 UBTF HBP1
HAND1,2.p2	0.868	HAND1 HAND2
FOXO1,3,4.p2	0.848	FOXO1 FOXO4 FOXO3
CDX1,2,4.p2	0.844	CDX1 CDX2 CDX4
CAGUGCA	0.826
STAT5{A,B}.p2	0.816	STAT5B STAT5A
FOXP3.p2	0.806	FOXP3
GLI1..3.p2	0.800	GLI1 GLI2 GLI3
ACUGCAU	0.798
TLX1..3_NFIC{dimer}.p2	0.797	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CDC5L.p2	0.790	CDC5L
ZNF384.p2	0.777	ZNF384
SP1.p2	0.761	SP1
CCAGCAU	0.724
UUUUUGC	0.707
ATF4.p2	0.688	ATF4
CAGCAGG	0.687
UCCCUUU	0.668
NFE2L1.p2	0.668	NFE2L1
NR3C1.p2	0.656	NR3C1
CUCCCAA	0.619
NKX6-1,2.p2	0.594	NKX6-1 NKX6-2
FOX{F1,F2,J1}.p2	0.585	FOXF2 FOXJ1 FOXF1
GGAAGAC	0.579
AACAGUC	0.542
NKX2-3_NKX2-5.p2	0.528	NKX2-5 NKX2-3
UGUGCGU	0.525
NR4A2.p2	0.464	NR4A2
CUACAGU	0.459
GAGAACU	0.454
GCUGGUG	0.438
FOXL1.p2	0.423	FOXL1
GUAGUGU	0.405
GZF1.p2	0.404	GZF1
GGACGGA	0.400
ACUGGCC	0.375
FOXN1.p2	0.360	FOXN1
SNAI1..3.p2	0.344	SNAI2 SNAI1 SNAI3
GGCUCAG	0.342
ESR1.p2	0.341	ESR1
ZEB1.p2	0.335	ZEB1
GFI1B.p2	0.327	GFI1B
PAX3,7.p2	0.326	PAX7 PAX3
POU6F1.p2	0.304	POU6F1
AACGGAA	0.299
NKX3-2.p2	0.233	NKX3-2
HOX{A4,D4}.p2	0.232	HOXA4 HOXD4
FEV.p2	0.232	FEV
NANOG.p2	0.220	NANOG
HOXA9_MEIS1.p2	0.203	MEIS1 HOXA9
AACCGUU	0.200
LEF1_TCF7_TCF7L1,2.p2	0.188	TCF7 TCF7L2 LEF1 TCF7L1
AIRE.p2	0.184	AIRE
AGCAGCG	0.179
AUGACAC	0.159
HIF1A.p2	0.153	HIF1A
GGCAAGA	0.138
GAUAUGU	0.131
AAUCUCU	0.126
POU3F1..4.p2	0.112	POU3F1 POU3F3 POU3F2 POU3F4
PAX6.p2	0.100	PAX6
PAX8.p2	0.090	PAX8
STAT1,3.p3	0.080	STAT1 STAT3
RORA.p2	0.080	RORA
CUX2.p2	0.074	CUX2
NR1H4.p2	0.047	NR1H4
HES1.p2	0.040	HES1
NFATC1..3.p2	-0.020	NFATC3 NFATC2 NFATC1
RXRA_VDR{dimer}.p2	-0.024	VDR	$logo of RXRA_VDR{dimer}.p2$
UUGGCAA	-0.026
ACCCGUA	-0.031
VSX1,2.p2	-0.057	VSX2 VSX1
NKX2-1,4.p2	-0.062	NKX2-1 NKX2-4
FOX{C1,C2}.p2	-0.067	FOXC1 FOXC2
GGAGUGU	-0.088
AAUCUCA	-0.101
AR.p2	-0.124	AR
AACCUGG	-0.124
NANOG{mouse}.p2	-0.140	NANOG
PDX1.p2	-0.154	PDX1
CGUGUCU	-0.175
CRX.p2	-0.206	CRX
NFE2L2.p2	-0.229	NFE2L2
POU1F1.p2	-0.232	POU1F1
TFAP2{A,C}.p2	-0.237	TFAP2C TFAP2A
GAGAUGA	-0.251
MSX1,2.p2	-0.315	MSX1 MSX2
PAX5.p2	-0.316	PAX5
UUGUUCG	-0.333
ETS1,2.p2	-0.355	ETS2 ETS1
NR6A1.p2	-0.360	NR6A1
AAUGCCC	-0.365
FOSL2.p2	-0.366	FOSL2
ACAGUAC	-0.375
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.395	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NKX2-2,8.p2	-0.404	NKX2-2 NKX2-8
UGCAUUG	-0.467
ATF6.p2	-0.509	ATF6
UCACAUU	-0.511
GUAACAG	-0.538
CGUACCG	-0.541
ARID5B.p2	-0.546	ARID5B
ZNF148.p2	-0.561	ZNF148
UGACCUA	-0.571
PBX1.p2	-0.577	PBX1
CCUUCAU	-0.594
GTF2A1,2.p2	-0.606	GTF2A1 GTF2A2
LHX3,4.p2	-0.614	LHX3 LHX4
FOX{D1,D2}.p2	-0.650	FOXD2 FOXD1
MYBL2.p2	-0.667	MYBL2
FOXA2.p3	-0.696	FOXA2
AAGGUGC	-0.698
PPARG.p2	-0.707	PPARG
NFE2.p2	-0.716	NFE2
UAAUGCU	-0.729
TBP.p2	-0.744	TBP
AUGUGCC	-0.784
ACCCUGU	-0.805
AGCUUAU	-0.807
HMX1.p2	-0.814	HMX1
PRDM1.p3	-0.839	PRDM1
CACAGUG	-0.864
EN1,2.p2	-0.876	EN1 EN2
IKZF1.p2	-0.924	IKZF1
AGUGGUU	-0.978
HNF4A_NR2F1,2.p2	-0.991	NR2F1 NR2F2 HNF4A
RXRG_dimer.p3	-1.001	NR1H2 RXRA PPARG PPARA RXRB RXRG
RUNX1..3.p2	-1.055	RUNX1 RUNX3 RUNX2
TEAD1.p2	-1.068	TEAD1 TEAD2 TEAD3 TEAD4
GCAGCAU	-1.121
RXR{A,B,G}.p2	-1.123	RXRA RXRB RXRG
CCAGUGU	-1.127
PATZ1.p2	-1.139	PATZ1
SPIB.p2	-1.139	SPIB
DMAP1_NCOR{1,2}_SMARC.p2	-1.142	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
UCAAGUA	-1.147
T.p2	-1.149	T
TLX2.p2	-1.165	TLX2
ONECUT1,2.p2	-1.216	ONECUT2 ONECUT1
BACH2.p2	-1.217	BACH2
BPTF.p2	-1.223	BPTF
FOXQ1.p2	-1.263	FOXQ1
HLF.p2	-1.271	HLF
AHR_ARNT_ARNT2.p2	-1.300	ARNT AHR ARNT2
GAUUGUC	-1.364
ACAGUAU	-1.463
TP53.p2	-1.514	TP53
UCCAGUU	-1.622
ZBTB16.p2	-1.647	ZBTB16
GAGGUAG	-1.703
HNF1A.p2	-1.704	HNF1A
SOX5.p2	-1.771	SOX5
RBPJ.p2	-1.781	RBPJ
AGCUGCC	-1.798
ZNF238.p2	-1.906	ZNF238
TFAP4.p2	-1.974	TFAP4
ADNP_IRX_SIX_ZHX.p2	-2.055	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GATA6.p2	-2.249	GATA6
EP300.p2	-2.321	EP300
FOXD3.p2	-2.322	FOXD3
SOX17.p2	-2.613	SOX17
KLF4.p3	-2.626	KLF4
NRF1.p2	-2.712	NRF1
EHF.p2	-2.814	EHF
AGCACCA	-2.877
ZNF143.p2	-3.024	ZNF143
CREB1.p2	-3.114	CREB1
IRF1,2,7.p3	-3.140	IRF1 IRF2 IRF7
POU2F1..3.p2	-3.194	POU2F2 POU2F1 POU2F3
CUUUGGU	-3.248
SRF.p3	-3.363	SRF
NFKB1_REL_RELA.p2	-3.413	RELA REL NFKB1
bHLH_family.p2	-3.457	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ELK1,4_GABP{A,B1}.p3	-3.609	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.709	ARNT MAX MYC USF1 BHLHB2 ARNT2
MYB.p2	-3.757	MYB
CCCUGAG	-3.790
TFDP1.p2	-4.090	TFDP1
E2F1..5.p2	-4.134	E2F4 E2F5 E2F2 E2F1 E2F3
SPI1.p2	-4.143	SPI1
AAGGCAC	-4.150
XBP1.p3	-4.185	XBP1
YY1.p2	-4.803	YY1
ELF1,2,4.p2	-5.415	ELF2 ELF1 ELF4
PITX1..3.p2	-5.820	PITX2 PITX3 PITX1
NFY{A,B,C}.p2	-6.384	NFYC NFYB NFYA

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Sample name: GNF_2_Amygdala

Sorted z-values for every WM.