ISMARA results: GNF_2_CingulateCortex

Sample name: GNF_2_CingulateCortex

Sorted Z-values histogram for the sample GNF_2_CingulateCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	7.120	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	6.800	REST
CUCCCAA	5.822
UGUGCUU	5.716
KLF12.p2	5.537	KLF12
JUN.p2	5.199	JUN JUND JUNB
GTF2I.p2	4.487	GTF2I
HIC1.p2	4.396	HIC1
GGCAGUG	4.378
EGR1..3.p2	4.377	EGR3 EGR1 EGR2
MAFB.p2	4.346	MAFB
MYOD1.p2	4.296	MYOD1
ZIC1..3.p2	4.217	ZIC1 ZIC2 ZIC3
RREB1.p2	4.154	RREB1
HOX{A6,A7,B6,B7}.p2	4.124	HOXB6 HOXA7 HOXB7 HOXA6
MZF1.p2	3.953	MZF1
TCF4_dimer.p2	3.951	TCF4
MTF1.p2	3.870	MTF1
TGIF1.p2	3.702	TGIF1
GATA1..3.p2	3.671	GATA1 GATA2 GATA3
TAL1_TCF{3,4,12}.p2	3.627	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
FOX{I1,J2}.p2	3.545	FOXI1 FOXJ2
TFCP2.p2	3.427	TFCP2
DBP.p2	3.401	DBP
POU5F1.p2	3.322	POU5F1
NKX2-3_NKX2-5.p2	3.083	NKX2-5 NKX2-3
ZFP161.p2	3.052	ZFP161
NHLH1,2.p2	3.020	NHLH1 NHLH2
SOX{8,9,10}.p2	2.991	SOX9 SOX8 SOX10
GGAAGAC	2.977
TBX4,5.p2	2.910	TBX5 TBX4
ACAUUCA	2.853
GGCUCAG	2.790
GUGCAAA	2.769
AUGGCUU	2.744
CAGCAGG	2.659
IKZF2.p2	2.577	IKZF2
MEF2{A,B,C,D}.p2	2.549	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UUGGUCC	2.521
AAUACUG	2.496
ATF2.p2	2.482	ATF2
FOXP3.p2	2.441	FOXP3
MAZ.p2	2.415	MAZ
UGCAUAG	2.364
PAX2.p2	2.310	PAX2
EVI1.p2	2.271	EVI1
PAX4.p2	2.207	PAX4
ZBTB6.p2	2.200	ZBTB6
HOX{A5,B5}.p2	2.191	HOXB5 HOXA5
ESRRA.p2	2.182	ESRRA
SMAD1..7,9.p2	2.115	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
FEV.p2	2.010	FEV
LMO2.p2	1.966	LMO2
AAAGUGC	1.929
ALX1.p2	1.901	ALX1
HAND1,2.p2	1.867	HAND1 HAND2
SOX2.p2	1.857	SOX2
EWSR1-FLI1.p2	1.788	FLI1 EWSR1
GFI1.p2	1.728	GFI1
SRY.p2	1.717	SRY
NR5A1,2.p2	1.650	NR5A1 NR5A2
UAAGACG	1.600
GUCAGUU	1.551
UCCCUUU	1.525
TFEB.p2	1.524	TFEB
SPZ1.p2	1.520	SPZ1
FOXO1,3,4.p2	1.515	FOXO1 FOXO4 FOXO3
RXR{A,B,G}.p2	1.496	RXRA RXRB RXRG
GAGAACU	1.487
UAUUGCU	1.475
CCAGCAU	1.461
EBF1.p2	1.421	EBF1
STAT1,3.p3	1.412	STAT1 STAT3
GTF2A1,2.p2	1.409	GTF2A1 GTF2A2
UUUUUGC	1.362
CUACAGU	1.305
GCUGGUG	1.293
NR4A2.p2	1.276	NR4A2
GGCAAGA	1.275
UUGGCAC	1.254
STAT2,4,6.p2	1.179	STAT2 STAT4 STAT6
GUAAACA	1.169
FOX{F1,F2,J1}.p2	1.134	FOXF2 FOXJ1 FOXF1
GLI1..3.p2	1.102	GLI1 GLI2 GLI3
GCAGCAU	1.094
GCUACAU	1.073
AUUGCAC	1.048
CACAGUG	1.041
AGUGCAA	1.013
GAGAUGA	0.980
UGAAAUG	0.957
GAUCAGA	0.953
IKZF1.p2	0.947	IKZF1
ZNF423.p2	0.926	ZNF423
SP1.p2	0.926	SP1
PRRX1,2.p2	0.921	PRRX2 PRRX1
HBP1_HMGB_SSRP1_UBTF.p2	0.901	HMGB2 HMGB3 SSRP1 UBTF HBP1
NFIL3.p2	0.898	NFIL3
AGCAGCG	0.851
FOXL1.p2	0.825	FOXL1
UCACAGU	0.809
CTCF.p2	0.805	CTCF
CAGUGCA	0.802
NFIX.p2	0.802	NFIX
MYFfamily.p2	0.760	MYOD1 MYF6 MYF5 MYOG
CUX2.p2	0.759	CUX2
UAAGACU	0.723
POU5F1_SOX2{dimer}.p2	0.686	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NR1H4.p2	0.676	NR1H4
LHX3,4.p2	0.651	LHX3 LHX4
NFE2.p2	0.640	NFE2
HMX1.p2	0.640	HMX1
ACUGGCC	0.637
NANOG{mouse}.p2	0.623	NANOG
AACAGUC	0.609
LEF1_TCF7_TCF7L1,2.p2	0.592	TCF7 TCF7L2 LEF1 TCF7L1
CDC5L.p2	0.554	CDC5L
UGUGCGU	0.545
PAX3,7.p2	0.530	PAX7 PAX3
SREBF1,2.p2	0.528	SREBF1 SREBF2
GZF1.p2	0.518	GZF1
NR3C1.p2	0.505	NR3C1
CGUGUCU	0.479
RORA.p2	0.465	RORA
NFE2L1.p2	0.461	NFE2L1
TFAP2B.p2	0.449	TFAP2B
AAGGUGC	0.443
SOX5.p2	0.429	SOX5
AAGUGCU	0.415
RXRA_VDR{dimer}.p2	0.407	VDR	$logo of RXRA_VDR{dimer}.p2$
CEBPA,B_DDIT3.p2	0.392	DDIT3 CEBPA CEBPB
NKX2-1,4.p2	0.385	NKX2-1 NKX2-4
TEAD1.p2	0.342	TEAD1 TEAD2 TEAD3 TEAD4
PAX6.p2	0.303	PAX6
FOX{D1,D2}.p2	0.291	FOXD2 FOXD1
AACACUG	0.290
NKX3-1.p2	0.290	NKX3-1
HOXA9_MEIS1.p2	0.267	MEIS1 HOXA9
AGCUGCC	0.223
PDX1.p2	0.179	PDX1
TLX1..3_NFIC{dimer}.p2	0.164	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
AAUCUCU	0.164
AGGUAGU	0.160
STAT5{A,B}.p2	0.151	STAT5B STAT5A
HES1.p2	0.134	HES1
CDX1,2,4.p2	0.126	CDX1 CDX2 CDX4
AUGACAC	0.120
NANOG.p2	0.116	NANOG
AACGGAA	0.116
POU1F1.p2	0.113	POU1F1
NR6A1.p2	0.109	NR6A1
ACUGCAU	0.103
GGACGGA	0.095
AGCAGCA	0.069
SNAI1..3.p2	0.059	SNAI2 SNAI1 SNAI3
HMGA1,2.p2	0.058	HMGA1 HMGA2
FOS_FOS{B,L1}_JUN{B,D}.p2	0.050	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
PAX8.p2	0.035	PAX8
ZEB1.p2	0.033	ZEB1
MYBL2.p2	0.031	MYBL2
UGCAUUG	0.020
AACCGUU	0.018
ACCCUGU	-0.030
HSF1,2.p2	-0.031	HSF1 HSF2
MSX1,2.p2	-0.032	MSX1 MSX2
TLX2.p2	-0.055	TLX2
ACCCGUA	-0.065
EN1,2.p2	-0.066	EN1 EN2
GFI1B.p2	-0.087	GFI1B
AR.p2	-0.125	AR
UUGGCAA	-0.136
UGACCUA	-0.151
HNF4A_NR2F1,2.p2	-0.161	NR2F1 NR2F2 HNF4A
POU3F1..4.p2	-0.170	POU3F1 POU3F3 POU3F2 POU3F4
HLF.p2	-0.178	HLF
AACCUGG	-0.183
ARID5B.p2	-0.190	ARID5B
GGAGUGU	-0.199
CGUACCG	-0.221
ATF5_CREB3.p2	-0.232	ATF5 CREB3
ZNF384.p2	-0.237	ZNF384
ESR1.p2	-0.261	ESR1
AUGGCAC	-0.273
CCCUGAG	-0.275
NFE2L2.p2	-0.293	NFE2L2
AGCUUAU	-0.312
GAUAUGU	-0.343
RUNX1..3.p2	-0.348	RUNX1 RUNX3 RUNX2
AAUCUCA	-0.367
FOX{C1,C2}.p2	-0.397	FOXC1 FOXC2
POU6F1.p2	-0.428	POU6F1
AIRE.p2	-0.450	AIRE
NFATC1..3.p2	-0.468	NFATC3 NFATC2 NFATC1
CCUUCAU	-0.475
AAUGCCC	-0.493
EOMES.p2	-0.543	EOMES
ETS1,2.p2	-0.584	ETS2 ETS1
NKX6-1,2.p2	-0.592	NKX6-1 NKX6-2
HOX{A4,D4}.p2	-0.636	HOXA4 HOXD4
VSX1,2.p2	-0.698	VSX2 VSX1
ADNP_IRX_SIX_ZHX.p2	-0.709	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
TFAP2{A,C}.p2	-0.731	TFAP2C TFAP2A
PRDM1.p3	-0.734	PRDM1
T.p2	-0.754	T
GGAAUGU	-0.775
NKX2-2,8.p2	-0.793	NKX2-2 NKX2-8
UUGUUCG	-0.795
NKX3-2.p2	-0.846	NKX3-2
CCAGUGU	-0.882
UCCAGUU	-1.058
ZNF238.p2	-1.110	ZNF238
PBX1.p2	-1.110	PBX1
GAGGUAG	-1.146
CRX.p2	-1.150	CRX
RBPJ.p2	-1.204	RBPJ
GAUUGUC	-1.289
GUAACAG	-1.308
AGUGGUU	-1.308
FOXN1.p2	-1.327	FOXN1
PPARG.p2	-1.367	PPARG
AGCACCA	-1.379
DMAP1_NCOR{1,2}_SMARC.p2	-1.437	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
FOSL2.p2	-1.456	FOSL2
AUGUGCC	-1.473
HNF1A.p2	-1.482	HNF1A
UAAUGCU	-1.491
TFAP4.p2	-1.525	TFAP4
ZNF148.p2	-1.585	ZNF148
GUAGUGU	-1.600
ACAGUAC	-1.636
PAX5.p2	-1.637	PAX5
FOXQ1.p2	-1.645	FOXQ1
ONECUT1,2.p2	-1.654	ONECUT2 ONECUT1
ZBTB16.p2	-1.657	ZBTB16
GATA6.p2	-1.657	GATA6
PITX1..3.p2	-1.731	PITX2 PITX3 PITX1
UCACAUU	-1.734
TP53.p2	-1.789	TP53
HIF1A.p2	-1.797	HIF1A
RXRG_dimer.p3	-1.822	NR1H2 RXRA PPARG PPARA RXRB RXRG
ATF4.p2	-1.949	ATF4
SPIB.p2	-1.981	SPIB
POU2F1..3.p2	-1.982	POU2F2 POU2F1 POU2F3
IRF1,2,7.p3	-2.048	IRF1 IRF2 IRF7
NRF1.p2	-2.049	NRF1
ATF6.p2	-2.102	ATF6
ZNF143.p2	-2.133	ZNF143
KLF4.p3	-2.235	KLF4
BACH2.p2	-2.294	BACH2
AHR_ARNT_ARNT2.p2	-2.307	ARNT AHR ARNT2
UCAAGUA	-2.361
BPTF.p2	-2.420	BPTF
EP300.p2	-2.496	EP300
ACAGUAU	-2.567
CREB1.p2	-2.594	CREB1
TBP.p2	-2.668	TBP
EHF.p2	-2.863	EHF
FOXD3.p2	-2.877	FOXD3
PATZ1.p2	-2.903	PATZ1
bHLH_family.p2	-3.235	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SRF.p3	-3.239	SRF
SOX17.p2	-3.295	SOX17
MYB.p2	-3.342	MYB
FOXA2.p3	-3.342	FOXA2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.501	ARNT MAX MYC USF1 BHLHB2 ARNT2
CUUUGGU	-3.534
NFKB1_REL_RELA.p2	-3.674	RELA REL NFKB1
SPI1.p2	-3.938	SPI1
ELK1,4_GABP{A,B1}.p3	-4.205	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
XBP1.p3	-4.310	XBP1
TFDP1.p2	-5.333	TFDP1
ELF1,2,4.p2	-5.862	ELF2 ELF1 ELF4
YY1.p2	-6.003	YY1
E2F1..5.p2	-6.336	E2F4 E2F5 E2F2 E2F1 E2F3
AAGGCAC	-6.480
NFY{A,B,C}.p2	-6.929	NFYC NFYB NFYA

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Sample name: GNF_2_CingulateCortex

Sorted z-values for every WM.