ISMARA results: GNF_2

Sample name: GNF_2_Heart

Sorted Z-values histogram for the sample GNF_2_Heart

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
MEF2{A,B,C,D}.p2	8.009	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HNF4A_NR2F1,2.p2	6.771	NR2F1 NR2F2 HNF4A
SRF.p3	5.938	SRF
NR5A1,2.p2	5.365	NR5A1 NR5A2
CAGCAGG	5.282
NR4A2.p2	5.198	NR4A2
TBP.p2	4.752	TBP
SMAD1..7,9.p2	4.638	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
POU2F1..3.p2	4.535	POU2F2 POU2F1 POU2F3
GTF2A1,2.p2	4.178	GTF2A1 GTF2A2
TCF4_dimer.p2	4.117	TCF4
MYOD1.p2	3.978	MYOD1
TLX1..3_NFIC{dimer}.p2	3.891	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NFIX.p2	3.862	NFIX
TGIF1.p2	3.816	TGIF1
MTF1.p2	3.816	MTF1
TFAP2{A,C}.p2	3.801	TFAP2C TFAP2A
HAND1,2.p2	3.747	HAND1 HAND2
KLF12.p2	3.734	KLF12
EP300.p2	3.608	EP300
FOSL2.p2	3.590	FOSL2
RXR{A,B,G}.p2	3.527	RXRA RXRB RXRG
GATA6.p2	3.525	GATA6
TEAD1.p2	3.520	TEAD1 TEAD2 TEAD3 TEAD4
CCCUGAG	3.507
TFCP2.p2	3.322	TFCP2
NHLH1,2.p2	3.286	NHLH1 NHLH2
ZNF423.p2	3.149	ZNF423
AR.p2	3.071	AR
GGCAGUG	3.012
PATZ1.p2	2.977	PATZ1
JUN.p2	2.863	JUN JUND JUNB
POU6F1.p2	2.858	POU6F1
MYFfamily.p2	2.804	MYOD1 MYF6 MYF5 MYOG
SP1.p2	2.767	SP1
NR1H4.p2	2.584	NR1H4
bHLH_family.p2	2.390	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ESR1.p2	2.343	ESR1
RREB1.p2	2.340	RREB1
HOX{A5,B5}.p2	2.274	HOXB5 HOXA5
RUNX1..3.p2	2.227	RUNX1 RUNX3 RUNX2
UAUUGCU	2.087
TLX2.p2	2.066	TLX2
ZFP161.p2	2.037	ZFP161
GGCUCAG	1.976
GAGGUAG	1.974
FEV.p2	1.958	FEV
ESRRA.p2	1.935	ESRRA
NFE2L1.p2	1.925	NFE2L1
GAUUGUC	1.841
AAGGCAC	1.819
NANOG.p2	1.707	NANOG
PPARG.p2	1.658	PPARG
EOMES.p2	1.496	EOMES
CACAGUG	1.467
EN1,2.p2	1.450	EN1 EN2
FOXO1,3,4.p2	1.446	FOXO1 FOXO4 FOXO3
POU5F1_SOX2{dimer}.p2	1.425	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOX{I1,J2}.p2	1.395	FOXI1 FOXJ2
ONECUT1,2.p2	1.393	ONECUT2 ONECUT1
ETS1,2.p2	1.365	ETS2 ETS1
ACCCUGU	1.362
NANOG{mouse}.p2	1.360	NANOG
ZBTB6.p2	1.242	ZBTB6
FOXA2.p3	1.227	FOXA2
IKZF1.p2	1.209	IKZF1
GLI1..3.p2	1.149	GLI1 GLI2 GLI3
REST.p3	1.111	REST
FOX{C1,C2}.p2	1.108	FOXC1 FOXC2
GATA1..3.p2	1.080	GATA1 GATA2 GATA3
EBF1.p2	1.070	EBF1
AGCAGCG	1.041
EVI1.p2	1.041	EVI1
MAZ.p2	0.994	MAZ
NFKB1_REL_RELA.p2	0.989	RELA REL NFKB1
ZNF148.p2	0.967	ZNF148
NKX2-1,4.p2	0.938	NKX2-1 NKX2-4
GGACGGA	0.937
POU5F1.p2	0.898	POU5F1
NR3C1.p2	0.898	NR3C1
RFX1..5_RFXANK_RFXAP.p2	0.854	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CGUACCG	0.847
CDX1,2,4.p2	0.843	CDX1 CDX2 CDX4
CDC5L.p2	0.825	CDC5L
STAT1,3.p3	0.801	STAT1 STAT3
AIRE.p2	0.794	AIRE
HNF1A.p2	0.784	HNF1A
NR6A1.p2	0.779	NR6A1
FOXP3.p2	0.779	FOXP3
KLF4.p3	0.706	KLF4
AAGGUGC	0.688
PAX3,7.p2	0.683	PAX7 PAX3
ADNP_IRX_SIX_ZHX.p2	0.675	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
RXRA_VDR{dimer}.p2	0.667	VDR	$logo of RXRA_VDR{dimer}.p2$
GGAGUGU	0.662
AGCUUAU	0.642
POU1F1.p2	0.608	POU1F1
DMAP1_NCOR{1,2}_SMARC.p2	0.607	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
FOX{F1,F2,J1}.p2	0.588	FOXF2 FOXJ1 FOXF1
CTCF.p2	0.575	CTCF
ZNF238.p2	0.570	ZNF238
BACH2.p2	0.566	BACH2
GFI1B.p2	0.529	GFI1B
GGAAGAC	0.502
AACGGAA	0.457
SRY.p2	0.445	SRY
HIC1.p2	0.443	HIC1
UCCCUUU	0.436
CGUGUCU	0.396
AGCACCA	0.380
NFIL3.p2	0.375	NFIL3
NKX6-1,2.p2	0.336	NKX6-1 NKX6-2
GAUAUGU	0.330
GCUGGUG	0.321
TFEB.p2	0.311	TFEB
GAUCAGA	0.300
ZIC1..3.p2	0.296	ZIC1 ZIC2 ZIC3
RORA.p2	0.280	RORA
DBP.p2	0.241	DBP
PAX4.p2	0.230	PAX4
STAT2,4,6.p2	0.230	STAT2 STAT4 STAT6
PRDM1.p3	0.223	PRDM1
SPIB.p2	0.222	SPIB
GAGAUGA	0.220
AUGUGCC	0.212
UGUGCGU	0.211
TP53.p2	0.201	TP53
NKX2-3_NKX2-5.p2	0.174	NKX2-5 NKX2-3
GGCAAGA	0.174
HMX1.p2	0.172	HMX1
AACAGUC	0.147
UGCAUAG	0.143
VSX1,2.p2	0.138	VSX2 VSX1
PDX1.p2	0.129	PDX1
PITX1..3.p2	0.126	PITX2 PITX3 PITX1
AAGUGCU	0.124
UGCAUUG	0.115
NKX3-1.p2	0.110	NKX3-1
POU3F1..4.p2	0.106	POU3F1 POU3F3 POU3F2 POU3F4
PAX8.p2	0.090	PAX8
ARID5B.p2	0.050	ARID5B
PAX6.p2	0.021	PAX6
CUUUGGU	0.013
TFAP2B.p2	0.009	TFAP2B
SOX17.p2	0.002	SOX17
HOXA9_MEIS1.p2	-0.008	MEIS1 HOXA9
SPZ1.p2	-0.053	SPZ1
FOX{D1,D2}.p2	-0.058	FOXD2 FOXD1
ACCCGUA	-0.067
GUCAGUU	-0.071
AGUGCAA	-0.093
NFE2.p2	-0.113	NFE2
ZEB1.p2	-0.123	ZEB1
NFY{A,B,C}.p2	-0.131	NFYC NFYB NFYA
AAUCUCA	-0.133
HOX{A6,A7,B6,B7}.p2	-0.156	HOXB6 HOXA7 HOXB7 HOXA6
CCAGCAU	-0.189
CCUUCAU	-0.215
AUGGCUU	-0.226
NKX3-2.p2	-0.251	NKX3-2
UAAUGCU	-0.261
ACUGGCC	-0.263
AUGGCAC	-0.274
IRF1,2,7.p3	-0.280	IRF1 IRF2 IRF7
LEF1_TCF7_TCF7L1,2.p2	-0.291	TCF7 TCF7L2 LEF1 TCF7L1
AAUGCCC	-0.291
TFAP4.p2	-0.300	TFAP4
GAGAACU	-0.317
AGCUGCC	-0.320
UGACCUA	-0.331
MSX1,2.p2	-0.339	MSX1 MSX2
AGCAGCA	-0.340
SREBF1,2.p2	-0.347	SREBF1 SREBF2
HLF.p2	-0.348	HLF
ATF2.p2	-0.365	ATF2
ATF4.p2	-0.381	ATF4
AUUGCAC	-0.397
AAAGUGC	-0.402
CCAGUGU	-0.406
HBP1_HMGB_SSRP1_UBTF.p2	-0.420	HMGB2 HMGB3 SSRP1 UBTF HBP1
CUX2.p2	-0.438	CUX2
AACCUGG	-0.450
AUGACAC	-0.464
AGGUAGU	-0.468
CRX.p2	-0.481	CRX
UUGGCAC	-0.494
GZF1.p2	-0.506	GZF1
ACAGUAC	-0.507
UUGGCAA	-0.513
CEBPA,B_DDIT3.p2	-0.513	DDIT3 CEBPA CEBPB
AACCGUU	-0.513
PBX1.p2	-0.544	PBX1
EWSR1-FLI1.p2	-0.559	FLI1 EWSR1
GCAGCAU	-0.566
T.p2	-0.591	T
GCUACAU	-0.625
CREB1.p2	-0.668	CREB1
GUAGUGU	-0.738
HMGA1,2.p2	-0.786	HMGA1 HMGA2
UAAGACU	-0.792
UUGUUCG	-0.808
PAX2.p2	-0.814	PAX2
ACAGUAU	-0.826
AAUCUCU	-0.852
NFE2L2.p2	-0.891	NFE2L2
TAL1_TCF{3,4,12}.p2	-0.907	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
LHX3,4.p2	-0.916	LHX3 LHX4
FOXQ1.p2	-0.940	FOXQ1
FOXL1.p2	-0.959	FOXL1
UCCAGUU	-0.967
RBPJ.p2	-0.974	RBPJ
STAT5{A,B}.p2	-0.996	STAT5B STAT5A
UGUGCUU	-0.999
ATF6.p2	-1.100	ATF6
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.108	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
MYBL2.p2	-1.116	MYBL2
GUAACAG	-1.163
CUACAGU	-1.174
ACUGCAU	-1.246
SOX5.p2	-1.266	SOX5
SOX2.p2	-1.292	SOX2
HES1.p2	-1.305	HES1
ALX1.p2	-1.311	ALX1
TBX4,5.p2	-1.328	TBX5 TBX4
GUAAACA	-1.336
AGUGGUU	-1.354
GUGCAAA	-1.362
AHR_ARNT_ARNT2.p2	-1.383	ARNT AHR ARNT2
CAGUGCA	-1.517
NFATC1..3.p2	-1.524	NFATC3 NFATC2 NFATC1
RXRG_dimer.p3	-1.562	NR1H2 RXRA PPARG PPARA RXRB RXRG
LMO2.p2	-1.604	LMO2
ZNF384.p2	-1.612	ZNF384
SPI1.p2	-1.631	SPI1
UAAGACG	-1.647
FOXN1.p2	-1.683	FOXN1
IKZF2.p2	-1.716	IKZF2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.728	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZNF143.p2	-1.728	ZNF143
UGAAAUG	-1.738
NKX2-2,8.p2	-1.753	NKX2-2 NKX2-8
HOX{A4,D4}.p2	-1.761	HOXA4 HOXD4
UCACAGU	-1.815
SNAI1..3.p2	-1.924	SNAI2 SNAI1 SNAI3
AAUACUG	-1.931
ELF1,2,4.p2	-1.940	ELF2 ELF1 ELF4
SOX{8,9,10}.p2	-2.073	SOX9 SOX8 SOX10
BPTF.p2	-2.254	BPTF
XBP1.p3	-2.407	XBP1
ACAUUCA	-2.497
GTF2I.p2	-2.520	GTF2I
HSF1,2.p2	-2.741	HSF1 HSF2
UCACAUU	-2.813
UUGGUCC	-2.853
MZF1.p2	-2.872	MZF1
AACACUG	-2.951
UCAAGUA	-3.093
EGR1..3.p2	-3.193	EGR3 EGR1 EGR2
ZBTB16.p2	-3.235	ZBTB16
HIF1A.p2	-3.271	HIF1A
GFI1.p2	-3.802	GFI1
CUCCCAA	-3.848
FOXD3.p2	-3.859	FOXD3
YY1.p2	-3.889	YY1
PRRX1,2.p2	-4.001	PRRX2 PRRX1
PAX5.p2	-4.132	PAX5
ELK1,4_GABP{A,B1}.p3	-4.458	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
EHF.p2	-4.494	EHF
NRF1.p2	-4.584	NRF1
MAFB.p2	-4.836	MAFB
GGAAUGU	-6.108
UUUUUGC	-6.906
ATF5_CREB3.p2	-7.179	ATF5 CREB3
E2F1..5.p2	-8.262	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-8.492	MYB
TFDP1.p2	-9.832	TFDP1

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Sample name: GNF_2_Heart

Sorted z-values for every WM.