ISMARA results: GNF_2

Sample name: GNF_2_Lung

Sorted Z-values histogram for the sample GNF_2_Lung

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
TBP.p2	7.043	TBP
HIC1.p2	5.373	HIC1
TFCP2.p2	5.294	TFCP2
TLX1..3_NFIC{dimer}.p2	4.748	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU2F1..3.p2	4.527	POU2F2 POU2F1 POU2F3
FOSL2.p2	4.431	FOSL2
EP300.p2	3.791	EP300
RUNX1..3.p2	3.667	RUNX1 RUNX3 RUNX2
ESR1.p2	3.652	ESR1
NFIX.p2	3.633	NFIX
AR.p2	3.613	AR
ZNF148.p2	3.604	ZNF148
AAGGCAC	3.438
TFEB.p2	3.381	TFEB
CAGCAGG	3.377
TEAD1.p2	3.374	TEAD1 TEAD2 TEAD3 TEAD4
GLI1..3.p2	3.286	GLI1 GLI2 GLI3
SMAD1..7,9.p2	3.235	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
MYFfamily.p2	3.184	MYOD1 MYF6 MYF5 MYOG
GTF2A1,2.p2	3.078	GTF2A1 GTF2A2
ETS1,2.p2	3.066	ETS2 ETS1
HAND1,2.p2	2.961	HAND1 HAND2
NR3C1.p2	2.892	NR3C1
TGIF1.p2	2.879	TGIF1
HNF4A_NR2F1,2.p2	2.860	NR2F1 NR2F2 HNF4A
FEV.p2	2.834	FEV
ZFP161.p2	2.662	ZFP161
NHLH1,2.p2	2.564	NHLH1 NHLH2
TFAP2{A,C}.p2	2.482	TFAP2C TFAP2A
PPARG.p2	2.403	PPARG
KLF12.p2	2.384	KLF12
NFKB1_REL_RELA.p2	2.334	RELA REL NFKB1
HOX{A5,B5}.p2	2.332	HOXB5 HOXA5
STAT1,3.p3	2.306	STAT1 STAT3
SP1.p2	2.283	SP1
MEF2{A,B,C,D}.p2	2.261	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
RXRA_VDR{dimer}.p2	2.258	VDR	$logo of RXRA_VDR{dimer}.p2$
NFATC1..3.p2	2.249	NFATC3 NFATC2 NFATC1
NR5A1,2.p2	2.218	NR5A1 NR5A2
GGCAGUG	2.215
SRF.p3	2.210	SRF
FOX{D1,D2}.p2	2.199	FOXD2 FOXD1
SPIB.p2	2.198	SPIB
NFE2L1.p2	2.082	NFE2L1
SNAI1..3.p2	1.980	SNAI2 SNAI1 SNAI3
PITX1..3.p2	1.955	PITX2 PITX3 PITX1
CCCUGAG	1.948
CCAGUGU	1.919
POU5F1.p2	1.853	POU5F1
TFAP4.p2	1.850	TFAP4
FOX{C1,C2}.p2	1.829	FOXC1 FOXC2
CCAGCAU	1.763
STAT2,4,6.p2	1.754	STAT2 STAT4 STAT6
FOXA2.p3	1.717	FOXA2
NR6A1.p2	1.673	NR6A1
ZBTB6.p2	1.666	ZBTB6
AIRE.p2	1.646	AIRE
RXR{A,B,G}.p2	1.577	RXRA RXRB RXRG
BACH2.p2	1.575	BACH2
TFAP2B.p2	1.513	TFAP2B
MTF1.p2	1.478	MTF1
ZEB1.p2	1.437	ZEB1
EBF1.p2	1.437	EBF1
ZNF423.p2	1.420	ZNF423
JUN.p2	1.417	JUN JUND JUNB
KLF4.p3	1.396	KLF4
HBP1_HMGB_SSRP1_UBTF.p2	1.350	HMGB2 HMGB3 SSRP1 UBTF HBP1
NR1H4.p2	1.338	NR1H4
LMO2.p2	1.263	LMO2
ZNF238.p2	1.246	ZNF238
MAZ.p2	1.245	MAZ
GATA1..3.p2	1.226	GATA1 GATA2 GATA3
POU6F1.p2	1.172	POU6F1
EOMES.p2	1.164	EOMES
FOX{F1,F2,J1}.p2	1.108	FOXF2 FOXJ1 FOXF1
CDX1,2,4.p2	1.094	CDX1 CDX2 CDX4
CTCF.p2	1.091	CTCF
IRF1,2,7.p3	1.027	IRF1 IRF2 IRF7
ATF2.p2	1.013	ATF2
TP53.p2	0.966	TP53
POU5F1_SOX2{dimer}.p2	0.908	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
PAX4.p2	0.903	PAX4
RREB1.p2	0.889	RREB1
GAUUGUC	0.864
AGUGCAA	0.832
AAAGUGC	0.814
GGCUCAG	0.812
NANOG{mouse}.p2	0.796	NANOG
HMX1.p2	0.795	HMX1
NFIL3.p2	0.773	NFIL3
TCF4_dimer.p2	0.759	TCF4
GATA6.p2	0.744	GATA6
GGAAGAC	0.740
GGACGGA	0.723
HOXA9_MEIS1.p2	0.715	MEIS1 HOXA9
PRDM1.p3	0.713	PRDM1
NANOG.p2	0.713	NANOG
CGUACCG	0.706
CACAGUG	0.697
AUUGCAC	0.636
UAAUGCU	0.610
ACAGUAC	0.596
CGUGUCU	0.580
ACCCUGU	0.564
ADNP_IRX_SIX_ZHX.p2	0.564	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
HNF1A.p2	0.552	HNF1A
AAGUGCU	0.545
ATF4.p2	0.538	ATF4
EN1,2.p2	0.528	EN1 EN2
ONECUT1,2.p2	0.527	ONECUT2 ONECUT1
MYOD1.p2	0.525	MYOD1
CDC5L.p2	0.518	CDC5L
CEBPA,B_DDIT3.p2	0.500	DDIT3 CEBPA CEBPB
AGCACCA	0.498
UUGGCAC	0.495
VSX1,2.p2	0.493	VSX2 VSX1
GFI1B.p2	0.487	GFI1B
FOXO1,3,4.p2	0.485	FOXO1 FOXO4 FOXO3
GUAGUGU	0.447
AGCAGCG	0.443
NR4A2.p2	0.443	NR4A2
UUGGCAA	0.423
GCUACAU	0.417
POU3F1..4.p2	0.388	POU3F1 POU3F3 POU3F2 POU3F4
UGCAUUG	0.387
GGAGUGU	0.361
UGCAUAG	0.347
FOX{I1,J2}.p2	0.347	FOXI1 FOXJ2
CUUUGGU	0.334
AUGUGCC	0.333
RORA.p2	0.305	RORA
FOS_FOS{B,L1}_JUN{B,D}.p2	0.305	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
DBP.p2	0.270	DBP
GGCAAGA	0.249
AGCUUAU	0.238
T.p2	0.219	T
PATZ1.p2	0.217	PATZ1
POU1F1.p2	0.203	POU1F1
GAUCAGA	0.188
ATF6.p2	0.182	ATF6
PAX8.p2	0.165	PAX8
UGUGCGU	0.163
NFE2.p2	0.117	NFE2
GUGCAAA	0.099
MSX1,2.p2	0.096	MSX1 MSX2
SREBF1,2.p2	0.082	SREBF1 SREBF2
CRX.p2	0.055	CRX
NKX2-1,4.p2	0.043	NKX2-1 NKX2-4
GZF1.p2	0.041	GZF1
ARID5B.p2	0.037	ARID5B
NKX2-3_NKX2-5.p2	0.033	NKX2-5 NKX2-3
PAX3,7.p2	0.031	PAX7 PAX3
RXRG_dimer.p3	0.025	NR1H2 RXRA PPARG PPARA RXRB RXRG
ACCCGUA	0.021
TLX2.p2	-0.005	TLX2
AACGGAA	-0.046
LHX3,4.p2	-0.052	LHX3 LHX4
HOX{A6,A7,B6,B7}.p2	-0.062	HOXB6 HOXA7 HOXB7 HOXA6
TAL1_TCF{3,4,12}.p2	-0.080	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGACCUA	-0.097
AAUGCCC	-0.123
AAGGUGC	-0.171
ACAGUAU	-0.182
GAGAUGA	-0.187
CUCCCAA	-0.188
AUGGCAC	-0.200
CUX2.p2	-0.213	CUX2
EWSR1-FLI1.p2	-0.219	FLI1 EWSR1
XBP1.p3	-0.231	XBP1
AACCUGG	-0.237
GAGAACU	-0.249
PAX6.p2	-0.250	PAX6
NKX3-2.p2	-0.265	NKX3-2
AAUCUCA	-0.290
GAUAUGU	-0.291
AACCGUU	-0.335
NKX6-1,2.p2	-0.386	NKX6-1 NKX6-2
GUAACAG	-0.390
HIF1A.p2	-0.392	HIF1A
UCCAGUU	-0.408
PBX1.p2	-0.413	PBX1
IKZF1.p2	-0.447	IKZF1
SOX17.p2	-0.452	SOX17
UAAGACU	-0.466
DMAP1_NCOR{1,2}_SMARC.p2	-0.470	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AGCAGCA	-0.487
PDX1.p2	-0.503	PDX1
CCUUCAU	-0.510
ACUGGCC	-0.513
ZNF384.p2	-0.533	ZNF384
LEF1_TCF7_TCF7L1,2.p2	-0.567	TCF7 TCF7L2 LEF1 TCF7L1
GUCAGUU	-0.567
GCUGGUG	-0.628
FOXP3.p2	-0.633	FOXP3
RFX1..5_RFXANK_RFXAP.p2	-0.670	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
UCCCUUU	-0.694
SOX2.p2	-0.713	SOX2
NKX3-1.p2	-0.737	NKX3-1
AGUGGUU	-0.751
FOXQ1.p2	-0.755	FOXQ1
AGGUAGU	-0.757
UAUUGCU	-0.763
CREB1.p2	-0.809	CREB1
AACAGUC	-0.833
SPZ1.p2	-0.834	SPZ1
EVI1.p2	-0.874	EVI1
AHR_ARNT_ARNT2.p2	-0.881	ARNT AHR ARNT2
AAUCUCU	-0.903
HOX{A4,D4}.p2	-0.942	HOXA4 HOXD4
GAGGUAG	-0.953
AAUACUG	-0.956
FOXD3.p2	-0.959	FOXD3
SRY.p2	-0.968	SRY
HMGA1,2.p2	-0.978	HMGA1 HMGA2
CUACAGU	-1.019
ALX1.p2	-1.029	ALX1
AGCUGCC	-1.043
NFY{A,B,C}.p2	-1.136	NFYC NFYB NFYA
ACUGCAU	-1.140
UUGGUCC	-1.142
SPI1.p2	-1.158	SPI1
NKX2-2,8.p2	-1.182	NKX2-2 NKX2-8
UAAGACG	-1.210
HLF.p2	-1.292	HLF
RBPJ.p2	-1.297	RBPJ
AUGACAC	-1.305
SOX5.p2	-1.435	SOX5
PAX5.p2	-1.437	PAX5
bHLH_family.p2	-1.451	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SOX{8,9,10}.p2	-1.464	SOX9 SOX8 SOX10
REST.p3	-1.550	REST
EGR1..3.p2	-1.585	EGR3 EGR1 EGR2
GCAGCAU	-1.628
GGAAUGU	-1.683
HSF1,2.p2	-1.688	HSF1 HSF2
MYBL2.p2	-1.733	MYBL2
ACAUUCA	-1.790
IKZF2.p2	-1.804	IKZF2
AUGGCUU	-1.808
FOXN1.p2	-1.831	FOXN1
HES1.p2	-1.835	HES1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.847	ARNT MAX MYC USF1 BHLHB2 ARNT2
CAGUGCA	-1.935
GTF2I.p2	-1.957	GTF2I
UUGUUCG	-2.025
FOXL1.p2	-2.028	FOXL1
UCACAUU	-2.085
ESRRA.p2	-2.091	ESRRA
TBX4,5.p2	-2.211	TBX5 TBX4
UCACAGU	-2.250
BPTF.p2	-2.450	BPTF
NFE2L2.p2	-2.585	NFE2L2
ELF1,2,4.p2	-2.727	ELF2 ELF1 ELF4
STAT5{A,B}.p2	-2.964	STAT5B STAT5A
ZIC1..3.p2	-3.025	ZIC1 ZIC2 ZIC3
ATF5_CREB3.p2	-3.057	ATF5 CREB3
GFI1.p2	-3.061	GFI1
PAX2.p2	-3.086	PAX2
GUAAACA	-3.214
MZF1.p2	-3.228	MZF1
UGUGCUU	-3.262
UGAAAUG	-3.277
YY1.p2	-3.473	YY1
EHF.p2	-3.474	EHF
MAFB.p2	-3.603	MAFB
PRRX1,2.p2	-3.794	PRRX2 PRRX1
AACACUG	-3.872
UUUUUGC	-3.874
TFDP1.p2	-4.449	TFDP1
ZNF143.p2	-4.451	ZNF143
ZBTB16.p2	-4.683	ZBTB16
ELK1,4_GABP{A,B1}.p3	-4.685	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
UCAAGUA	-4.889
NRF1.p2	-6.455	NRF1
E2F1..5.p2	-8.093	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-8.784	MYB

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Sample name: GNF_2_Lung

Sorted z-values for every WM.