ISMARA results: GNF_2_MedullaOblongata

Sample name: GNF_2_MedullaOblongata

Sorted Z-values histogram for the sample GNF_2_MedullaOblongata

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	6.860	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	6.791	REST
KLF12.p2	4.961	KLF12
GTF2I.p2	4.892	GTF2I
CUCCCAA	4.853
TGIF1.p2	4.768	TGIF1
JUN.p2	4.729	JUN JUND JUNB
MYOD1.p2	4.496	MYOD1
UGUGCUU	4.388
ZIC1..3.p2	4.308	ZIC1 ZIC2 ZIC3
EGR1..3.p2	4.280	EGR3 EGR1 EGR2
HOX{A6,A7,B6,B7}.p2	3.984	HOXB6 HOXA7 HOXB7 HOXA6
GGCAGUG	3.962
MZF1.p2	3.721	MZF1
MTF1.p2	3.720	MTF1
HIC1.p2	3.694	HIC1
RREB1.p2	3.459	RREB1
DBP.p2	3.346	DBP
NHLH1,2.p2	3.335	NHLH1 NHLH2
FOX{I1,J2}.p2	3.251	FOXI1 FOXJ2
PAX2.p2	3.171	PAX2
POU5F1.p2	3.141	POU5F1
TAL1_TCF{3,4,12}.p2	3.104	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GGCUCAG	3.067
MAFB.p2	3.031	MAFB
SMAD1..7,9.p2	2.897	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TBX4,5.p2	2.842	TBX5 TBX4
GATA1..3.p2	2.808	GATA1 GATA2 GATA3
GGAAGAC	2.805
MEF2{A,B,C,D}.p2	2.803	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TFCP2.p2	2.706	TFCP2
TCF4_dimer.p2	2.701	TCF4
EVI1.p2	2.671	EVI1
ZFP161.p2	2.654	ZFP161
MAZ.p2	2.626	MAZ
FOXP3.p2	2.597	FOXP3
UGCAUAG	2.595
AUGGCUU	2.584
IKZF2.p2	2.510	IKZF2
ESRRA.p2	2.486	ESRRA
SOX{8,9,10}.p2	2.350	SOX9 SOX8 SOX10
NKX2-3_NKX2-5.p2	2.316	NKX2-5 NKX2-3
ALX1.p2	2.316	ALX1
LMO2.p2	2.302	LMO2
UUGGUCC	2.294
UCCCUUU	2.186
CAGCAGG	2.115
STAT2,4,6.p2	2.093	STAT2 STAT4 STAT6
PAX4.p2	2.015	PAX4
ACAUUCA	2.010
AAUACUG	1.927
TFEB.p2	1.814	TFEB
UUGGCAC	1.794
UUUUUGC	1.767
UAAGACG	1.749
UGAAAUG	1.746
AGUGCAA	1.744
FEV.p2	1.723	FEV
SRY.p2	1.717	SRY
NR3C1.p2	1.706	NR3C1
SOX2.p2	1.699	SOX2
FOXO1,3,4.p2	1.679	FOXO1 FOXO4 FOXO3
GAGAACU	1.657
HBP1_HMGB_SSRP1_UBTF.p2	1.645	HMGB2 HMGB3 SSRP1 UBTF HBP1
HOX{A5,B5}.p2	1.584	HOXB5 HOXA5
ATF2.p2	1.543	ATF2
SPZ1.p2	1.518	SPZ1
NR1H4.p2	1.473	NR1H4
HMGA1,2.p2	1.471	HMGA1 HMGA2
AUUGCAC	1.459
UAUUGCU	1.438
POU5F1_SOX2{dimer}.p2	1.434	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CCAGCAU	1.421
GUGCAAA	1.400
AAAGUGC	1.393
GUCAGUU	1.373
GUAAACA	1.363
TLX1..3_NFIC{dimer}.p2	1.343	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HAND1,2.p2	1.337	HAND1 HAND2
PRRX1,2.p2	1.287	PRRX2 PRRX1
NFIL3.p2	1.287	NFIL3
LEF1_TCF7_TCF7L1,2.p2	1.283	TCF7 TCF7L2 LEF1 TCF7L1
CACAGUG	1.275
EBF1.p2	1.271	EBF1
GGCAAGA	1.263
FOX{F1,F2,J1}.p2	1.235	FOXF2 FOXJ1 FOXF1
GFI1.p2	1.199	GFI1
NANOG{mouse}.p2	1.146	NANOG
MYFfamily.p2	1.132	MYOD1 MYF6 MYF5 MYOG
ZBTB6.p2	1.119	ZBTB6
AACAGUC	1.108
GAUCAGA	1.101
AAGUGCU	1.055
AGCAGCA	1.051
GCUGGUG	1.041
UCACAGU	1.032
GCUACAU	1.028
GTF2A1,2.p2	0.967	GTF2A1 GTF2A2
CUACAGU	0.953
STAT1,3.p3	0.917	STAT1 STAT3
EWSR1-FLI1.p2	0.906	FLI1 EWSR1
RORA.p2	0.872	RORA
NFIX.p2	0.861	NFIX
FOXL1.p2	0.853	FOXL1
GLI1..3.p2	0.809	GLI1 GLI2 GLI3
IKZF1.p2	0.804	IKZF1
POU1F1.p2	0.802	POU1F1
NR4A2.p2	0.774	NR4A2
STAT5{A,B}.p2	0.763	STAT5B STAT5A
CDC5L.p2	0.760	CDC5L
ACUGGCC	0.752
UGCAUUG	0.733
EN1,2.p2	0.730	EN1 EN2
CUX2.p2	0.685	CUX2
NR5A1,2.p2	0.675	NR5A1 NR5A2
GCAGCAU	0.660
SNAI1..3.p2	0.654	SNAI2 SNAI1 SNAI3
PAX3,7.p2	0.644	PAX7 PAX3
UAAGACU	0.634
PDX1.p2	0.623	PDX1
NKX2-1,4.p2	0.622	NKX2-1 NKX2-4
SP1.p2	0.613	SP1
GAGAUGA	0.613
SREBF1,2.p2	0.563	SREBF1 SREBF2
RUNX1..3.p2	0.522	RUNX1 RUNX3 RUNX2
NANOG.p2	0.499	NANOG
AGCUGCC	0.498
GZF1.p2	0.493	GZF1
ACUGCAU	0.491
HMX1.p2	0.489	HMX1
FOX{D1,D2}.p2	0.455	FOXD2 FOXD1
RXR{A,B,G}.p2	0.443	RXRA RXRB RXRG
AACACUG	0.443
FOS_FOS{B,L1}_JUN{B,D}.p2	0.433	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
UUGUUCG	0.389
UGUGCGU	0.372
AAGGUGC	0.365
CEBPA,B_DDIT3.p2	0.358	DDIT3 CEBPA CEBPB
PAX6.p2	0.355	PAX6
NR6A1.p2	0.350	NR6A1
CGUGUCU	0.349
LHX3,4.p2	0.338	LHX3 LHX4
POU3F1..4.p2	0.334	POU3F1 POU3F3 POU3F2 POU3F4
RXRA_VDR{dimer}.p2	0.308	VDR	$logo of RXRA_VDR{dimer}.p2$
CAGUGCA	0.290
AUGACAC	0.231
AGGUAGU	0.215
CTCF.p2	0.213	CTCF
GFI1B.p2	0.195	GFI1B
GAGGUAG	0.159
FOX{C1,C2}.p2	0.115	FOXC1 FOXC2
HOXA9_MEIS1.p2	0.112	MEIS1 HOXA9
PAX8.p2	0.097	PAX8
EOMES.p2	0.097	EOMES
AAUCUCU	0.086
HNF4A_NR2F1,2.p2	0.080	NR2F1 NR2F2 HNF4A
AIRE.p2	0.070	AIRE
NKX3-1.p2	0.051	NKX3-1
ZNF384.p2	0.041	ZNF384
ACCCUGU	0.032
ETS1,2.p2	0.005	ETS2 ETS1
GGACGGA	-0.003
ARID5B.p2	-0.032	ARID5B
ACCCGUA	-0.048
NFE2L2.p2	-0.059	NFE2L2
AACCGUU	-0.063
AACGGAA	-0.066
UGACCUA	-0.072
CDX1,2,4.p2	-0.073	CDX1 CDX2 CDX4
AR.p2	-0.073	AR
VSX1,2.p2	-0.075	VSX2 VSX1
TLX2.p2	-0.111	TLX2
NKX3-2.p2	-0.118	NKX3-2
AACCUGG	-0.124
HLF.p2	-0.129	HLF
MYBL2.p2	-0.150	MYBL2
TEAD1.p2	-0.169	TEAD1 TEAD2 TEAD3 TEAD4
AUGGCAC	-0.227
NFE2L1.p2	-0.250	NFE2L1
AGCAGCG	-0.251
AAUCUCA	-0.268
ZNF423.p2	-0.291	ZNF423
GGAGUGU	-0.299
CGUACCG	-0.318
ZEB1.p2	-0.321	ZEB1
AAUGCCC	-0.327
MSX1,2.p2	-0.328	MSX1 MSX2
TFAP2B.p2	-0.342	TFAP2B
UUGGCAA	-0.351
HSF1,2.p2	-0.357	HSF1 HSF2
NKX6-1,2.p2	-0.363	NKX6-1 NKX6-2
FOXN1.p2	-0.371	FOXN1
SOX5.p2	-0.376	SOX5
ESR1.p2	-0.385	ESR1
GAUAUGU	-0.394
HOX{A4,D4}.p2	-0.450	HOXA4 HOXD4
HES1.p2	-0.474	HES1
CCCUGAG	-0.519
POU6F1.p2	-0.580	POU6F1
AGCUUAU	-0.605
POU2F1..3.p2	-0.622	POU2F2 POU2F1 POU2F3
HNF1A.p2	-0.687	HNF1A
ZNF238.p2	-0.708	ZNF238
NFATC1..3.p2	-0.721	NFATC3 NFATC2 NFATC1
NFE2.p2	-0.736	NFE2
RBPJ.p2	-0.752	RBPJ
DMAP1_NCOR{1,2}_SMARC.p2	-0.762	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
UCCAGUU	-0.774
CCUUCAU	-0.782
ADNP_IRX_SIX_ZHX.p2	-0.806	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GUAGUGU	-0.824
T.p2	-0.867	T
GUAACAG	-0.891
GATA6.p2	-0.894	GATA6
AGCACCA	-0.968
PAX5.p2	-1.064	PAX5
TFAP2{A,C}.p2	-1.067	TFAP2C TFAP2A
PBX1.p2	-1.184	PBX1
ATF5_CREB3.p2	-1.190	ATF5 CREB3
CRX.p2	-1.203	CRX
ONECUT1,2.p2	-1.206	ONECUT2 ONECUT1
FOSL2.p2	-1.216	FOSL2
GGAAUGU	-1.243
AGUGGUU	-1.247
UCAAGUA	-1.257
UCACAUU	-1.259
NKX2-2,8.p2	-1.260	NKX2-2 NKX2-8
PRDM1.p3	-1.274	PRDM1
UAAUGCU	-1.316
AUGUGCC	-1.460
GAUUGUC	-1.577
ATF4.p2	-1.584	ATF4
ACAGUAU	-1.597
CCAGUGU	-1.633
TBP.p2	-1.918	TBP
ATF6.p2	-1.934	ATF6
PPARG.p2	-1.962	PPARG
BACH2.p2	-2.018	BACH2
FOXQ1.p2	-2.036	FOXQ1
ACAGUAC	-2.167
bHLH_family.p2	-2.169	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	-2.241	HIF1A
ZBTB16.p2	-2.264	ZBTB16
ZNF148.p2	-2.296	ZNF148
RXRG_dimer.p3	-2.304	NR1H2 RXRA PPARG PPARA RXRB RXRG
BPTF.p2	-2.351	BPTF
SPIB.p2	-2.359	SPIB
FOXA2.p3	-2.386	FOXA2
SRF.p3	-2.397	SRF
TFAP4.p2	-2.400	TFAP4
SOX17.p2	-2.442	SOX17
TP53.p2	-2.483	TP53
CREB1.p2	-2.484	CREB1
CUUUGGU	-2.513
FOXD3.p2	-2.650	FOXD3
AHR_ARNT_ARNT2.p2	-2.686	ARNT AHR ARNT2
NFKB1_REL_RELA.p2	-2.718	RELA REL NFKB1
IRF1,2,7.p3	-2.977	IRF1 IRF2 IRF7
PATZ1.p2	-2.982	PATZ1
EHF.p2	-3.039	EHF
ZNF143.p2	-3.169	ZNF143
KLF4.p3	-3.260	KLF4
PITX1..3.p2	-3.334	PITX2 PITX3 PITX1
EP300.p2	-3.475	EP300
SPI1.p2	-3.556	SPI1
MYB.p2	-3.982	MYB
TFDP1.p2	-4.393	TFDP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.497	ARNT MAX MYC USF1 BHLHB2 ARNT2
NRF1.p2	-4.565	NRF1
XBP1.p3	-4.688	XBP1
AAGGCAC	-4.690
ELK1,4_GABP{A,B1}.p3	-5.244	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
E2F1..5.p2	-5.696	E2F4 E2F5 E2F2 E2F1 E2F3
ELF1,2,4.p2	-6.370	ELF2 ELF1 ELF4
YY1.p2	-7.403	YY1
NFY{A,B,C}.p2	-7.630	NFYC NFYB NFYA

ISMARA

Project

Navigation

Downloads

Sample name: GNF_2_MedullaOblongata

Sorted z-values for every WM.