ISMARA results: GNF_2

Sample name: GNF_2_Ovary

Sorted Z-values histogram for the sample GNF_2_Ovary

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
UUUUUGC	6.166
TBP.p2	4.345	TBP
SRF.p3	4.267	SRF
FOX{D1,D2}.p2	3.739	FOXD2 FOXD1
ATF6.p2	3.604	ATF6
MYFfamily.p2	3.563	MYOD1 MYF6 MYF5 MYOG
CUCCCAA	3.493
GATA1..3.p2	3.488	GATA1 GATA2 GATA3
ZNF384.p2	3.228	ZNF384
POU1F1.p2	2.953	POU1F1
TFAP4.p2	2.883	TFAP4
TEAD1.p2	2.810	TEAD1 TEAD2 TEAD3 TEAD4
TCF4_dimer.p2	2.806	TCF4
EVI1.p2	2.786	EVI1
GTF2A1,2.p2	2.679	GTF2A1 GTF2A2
RREB1.p2	2.674	RREB1
GTF2I.p2	2.674	GTF2I
TLX1..3_NFIC{dimer}.p2	2.624	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
STAT1,3.p3	2.505	STAT1 STAT3
AHR_ARNT_ARNT2.p2	2.463	ARNT AHR ARNT2
GATA6.p2	2.396	GATA6
MYOD1.p2	2.332	MYOD1
MZF1.p2	2.331	MZF1
MTF1.p2	2.248	MTF1
SMAD1..7,9.p2	2.198	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AAAGUGC	2.186
HNF1A.p2	2.018	HNF1A
FOXA2.p3	1.986	FOXA2
CUUUGGU	1.959
NANOG{mouse}.p2	1.944	NANOG
UGAAAUG	1.847
FOXL1.p2	1.786	FOXL1
MAZ.p2	1.766	MAZ
STAT2,4,6.p2	1.755	STAT2 STAT4 STAT6
NFIX.p2	1.672	NFIX
HMX1.p2	1.651	HMX1
TLX2.p2	1.650	TLX2
PRRX1,2.p2	1.637	PRRX2 PRRX1
HBP1_HMGB_SSRP1_UBTF.p2	1.607	HMGB2 HMGB3 SSRP1 UBTF HBP1
EGR1..3.p2	1.598	EGR3 EGR1 EGR2
PPARG.p2	1.582	PPARG
SPIB.p2	1.559	SPIB
UCCCUUU	1.557
RXR{A,B,G}.p2	1.557	RXRA RXRB RXRG
JUN.p2	1.534	JUN JUND JUNB
AAUACUG	1.485
UAAGACU	1.483
AGGUAGU	1.480
TFCP2.p2	1.459	TFCP2
HAND1,2.p2	1.456	HAND1 HAND2
CCAGCAU	1.389
MSX1,2.p2	1.364	MSX1 MSX2
FOXO1,3,4.p2	1.358	FOXO1 FOXO4 FOXO3
CACAGUG	1.344
LEF1_TCF7_TCF7L1,2.p2	1.317	TCF7 TCF7L2 LEF1 TCF7L1
MYBL2.p2	1.306	MYBL2
TFAP2{A,C}.p2	1.279	TFAP2C TFAP2A
NR6A1.p2	1.254	NR6A1
NR1H4.p2	1.246	NR1H4
TBX4,5.p2	1.210	TBX5 TBX4
KLF12.p2	1.210	KLF12
PRDM1.p3	1.206	PRDM1
NKX2-1,4.p2	1.194	NKX2-1 NKX2-4
POU5F1_SOX2{dimer}.p2	1.182	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AGCUUAU	1.169
EN1,2.p2	1.168	EN1 EN2
PAX6.p2	1.164	PAX6
POU3F1..4.p2	1.155	POU3F1 POU3F3 POU3F2 POU3F4
GAGGUAG	1.118
RBPJ.p2	1.118	RBPJ
PAX2.p2	1.117	PAX2
UGCAUAG	1.080
GAGAACU	1.056
AAUCUCU	1.023
CGUGUCU	1.001
FOS_FOS{B,L1}_JUN{B,D}.p2	1.000	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ZNF423.p2	0.994	ZNF423
PDX1.p2	0.929	PDX1
GUCAGUU	0.915
AUGACAC	0.912
NFATC1..3.p2	0.879	NFATC3 NFATC2 NFATC1
ACAGUAU	0.875
REST.p3	0.847	REST
UAAUGCU	0.838
FOXP3.p2	0.833	FOXP3
AGCAGCA	0.825
UUGUUCG	0.822
FEV.p2	0.820	FEV
AGCUGCC	0.800
ETS1,2.p2	0.797	ETS2 ETS1
GUAGUGU	0.797
VSX1,2.p2	0.788	VSX2 VSX1
GAUCAGA	0.778
NFIL3.p2	0.762	NFIL3
AIRE.p2	0.760	AIRE
AR.p2	0.748	AR
NR3C1.p2	0.727	NR3C1
HMGA1,2.p2	0.725	HMGA1 HMGA2
POU2F1..3.p2	0.690	POU2F2 POU2F1 POU2F3
T.p2	0.677	T
CREB1.p2	0.674	CREB1
ACCCUGU	0.630
FOX{C1,C2}.p2	0.620	FOXC1 FOXC2
NFKB1_REL_RELA.p2	0.603	RELA REL NFKB1
TGIF1.p2	0.591	TGIF1
HOX{A5,B5}.p2	0.590	HOXB5 HOXA5
AACACUG	0.581
HSF1,2.p2	0.562	HSF1 HSF2
PAX8.p2	0.558	PAX8
SRY.p2	0.541	SRY
HIC1.p2	0.540	HIC1
UAAGACG	0.491
GGCUCAG	0.487
ACUGGCC	0.485
RXRA_VDR{dimer}.p2	0.482	VDR	$logo of RXRA_VDR{dimer}.p2$
POU5F1.p2	0.477	POU5F1
CDX1,2,4.p2	0.474	CDX1 CDX2 CDX4
UAUUGCU	0.471
ALX1.p2	0.470	ALX1
GGCAGUG	0.464
HNF4A_NR2F1,2.p2	0.460	NR2F1 NR2F2 HNF4A
GGAAGAC	0.447
AAGUGCU	0.432
CUACAGU	0.409
GAGAUGA	0.406
EBF1.p2	0.403	EBF1
ZIC1..3.p2	0.402	ZIC1 ZIC2 ZIC3
AAUCUCA	0.392
NFE2L1.p2	0.388	NFE2L1
AGUGGUU	0.383
AUGUGCC	0.382
UUGGCAC	0.364
FOX{I1,J2}.p2	0.340	FOXI1 FOXJ2
ZNF238.p2	0.339	ZNF238
XBP1.p3	0.337	XBP1
CCAGUGU	0.277
NKX2-3_NKX2-5.p2	0.268	NKX2-5 NKX2-3
AACCUGG	0.259
GLI1..3.p2	0.258	GLI1 GLI2 GLI3
RORA.p2	0.251	RORA
POU6F1.p2	0.241	POU6F1
NKX6-1,2.p2	0.239	NKX6-1 NKX6-2
GGACGGA	0.202
AAGGCAC	0.198
UGUGCUU	0.189
GZF1.p2	0.174	GZF1
ONECUT1,2.p2	0.166	ONECUT2 ONECUT1
GGAGUGU	0.163
GUAAACA	0.121
PAX3,7.p2	0.119	PAX7 PAX3
SOX17.p2	0.111	SOX17
AAUGCCC	0.084
IKZF2.p2	0.083	IKZF2
UGUGCGU	0.083
CAGUGCA	0.078
SNAI1..3.p2	0.066	SNAI2 SNAI1 SNAI3
ATF2.p2	0.048	ATF2
ZBTB16.p2	-0.014	ZBTB16
UUGGUCC	-0.016
GFI1.p2	-0.034	GFI1
ACCCGUA	-0.047
DBP.p2	-0.052	DBP
ACUGCAU	-0.074
NKX3-2.p2	-0.095	NKX3-2
IKZF1.p2	-0.106	IKZF1
RXRG_dimer.p3	-0.133	NR1H2 RXRA PPARG PPARA RXRB RXRG
GGCAAGA	-0.136
STAT5{A,B}.p2	-0.142	STAT5B STAT5A
CCUUCAU	-0.146
CCCUGAG	-0.155
EP300.p2	-0.169	EP300
AAGGUGC	-0.187
GCUACAU	-0.197
CDC5L.p2	-0.203	CDC5L
UCCAGUU	-0.205
CRX.p2	-0.210	CRX
EOMES.p2	-0.210	EOMES
CGUACCG	-0.218
NKX3-1.p2	-0.220	NKX3-1
SOX5.p2	-0.223	SOX5
UGACCUA	-0.257
AGCAGCG	-0.280
GAUUGUC	-0.281
AUUGCAC	-0.290
NANOG.p2	-0.290	NANOG
HOXA9_MEIS1.p2	-0.290	MEIS1 HOXA9
GAUAUGU	-0.308
FOXN1.p2	-0.311	FOXN1
AACGGAA	-0.315
GUAACAG	-0.319
UUGGCAA	-0.321
ZFP161.p2	-0.326	ZFP161
PITX1..3.p2	-0.330	PITX2 PITX3 PITX1
HLF.p2	-0.331	HLF
UCACAGU	-0.342
ZBTB6.p2	-0.347	ZBTB6
AACCGUU	-0.352
AUGGCUU	-0.410
SREBF1,2.p2	-0.416	SREBF1 SREBF2
SPZ1.p2	-0.426	SPZ1
ADNP_IRX_SIX_ZHX.p2	-0.437	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CAGCAGG	-0.439
UGCAUUG	-0.441
TP53.p2	-0.441	TP53
CEBPA,B_DDIT3.p2	-0.448	DDIT3 CEBPA CEBPB
AGUGCAA	-0.521
PATZ1.p2	-0.550	PATZ1
NFE2.p2	-0.555	NFE2
AACAGUC	-0.560
RUNX1..3.p2	-0.580	RUNX1 RUNX3 RUNX2
GFI1B.p2	-0.594	GFI1B
AGCACCA	-0.608
LHX3,4.p2	-0.662	LHX3 LHX4
NHLH1,2.p2	-0.680	NHLH1 NHLH2
FOSL2.p2	-0.684	FOSL2
ESR1.p2	-0.709	ESR1
ACAUUCA	-0.716
UCACAUU	-0.734
TAL1_TCF{3,4,12}.p2	-0.745	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CUX2.p2	-0.747	CUX2
TFEB.p2	-0.748	TFEB
MEF2{A,B,C,D}.p2	-0.757	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
ZNF148.p2	-0.786	ZNF148
RFX1..5_RFXANK_RFXAP.p2	-0.812	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
SPI1.p2	-0.821	SPI1
NR5A1,2.p2	-0.824	NR5A1 NR5A2
FOXQ1.p2	-0.884	FOXQ1
EWSR1-FLI1.p2	-0.905	FLI1 EWSR1
FOX{F1,F2,J1}.p2	-0.947	FOXF2 FOXJ1 FOXF1
ZEB1.p2	-1.089	ZEB1
AUGGCAC	-1.114
EHF.p2	-1.162	EHF
HOX{A4,D4}.p2	-1.168	HOXA4 HOXD4
GCAGCAU	-1.190
SOX2.p2	-1.243	SOX2
ACAGUAC	-1.260
DMAP1_NCOR{1,2}_SMARC.p2	-1.326	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GUGCAAA	-1.347
UCAAGUA	-1.353
HOX{A6,A7,B6,B7}.p2	-1.413	HOXB6 HOXA7 HOXB7 HOXA6
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.432	ARNT MAX MYC USF1 BHLHB2 ARNT2
PAX4.p2	-1.483	PAX4
BACH2.p2	-1.485	BACH2
NR4A2.p2	-1.495	NR4A2
KLF4.p3	-1.578	KLF4
FOXD3.p2	-1.580	FOXD3
IRF1,2,7.p3	-1.638	IRF1 IRF2 IRF7
ARID5B.p2	-1.655	ARID5B
TFDP1.p2	-1.759	TFDP1
GCUGGUG	-1.770
CTCF.p2	-1.833	CTCF
ATF5_CREB3.p2	-1.859	ATF5 CREB3
NKX2-2,8.p2	-2.078	NKX2-2 NKX2-8
LMO2.p2	-2.310	LMO2
bHLH_family.p2	-2.597	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ATF4.p2	-2.610	ATF4
BPTF.p2	-2.635	BPTF
PBX1.p2	-2.636	PBX1
MAFB.p2	-2.764	MAFB
SOX{8,9,10}.p2	-2.816	SOX9 SOX8 SOX10
SP1.p2	-2.950	SP1
PAX5.p2	-3.008	PAX5
ELF1,2,4.p2	-3.090	ELF2 ELF1 ELF4
HIF1A.p2	-3.091	HIF1A
HES1.p2	-3.246	HES1
NFE2L2.p2	-3.483	NFE2L2
TFAP2B.p2	-3.650	TFAP2B
ESRRA.p2	-4.052	ESRRA
GGAAUGU	-4.266
E2F1..5.p2	-6.031	E2F4 E2F5 E2F2 E2F1 E2F3
NFY{A,B,C}.p2	-6.478	NFYC NFYB NFYA
MYB.p2	-7.073	MYB
ZNF143.p2	-7.287	ZNF143
YY1.p2	-7.877	YY1
ELK1,4_GABP{A,B1}.p3	-8.162	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NRF1.p2	-9.463	NRF1

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Sample name: GNF_2_Ovary

Sorted z-values for every WM.