ISMARA results: GNF_2

Sample name: GNF_2_SmoothMuscle

Sorted Z-values histogram for the sample GNF_2_SmoothMuscle

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
XBP1.p3	12.207	XBP1
TBP.p2	6.032	TBP
ATF6.p2	4.404	ATF6
TEAD1.p2	4.328	TEAD1 TEAD2 TEAD3 TEAD4
ZNF238.p2	4.225	ZNF238
TFAP2{A,C}.p2	3.883	TFAP2C TFAP2A
KLF4.p3	3.563	KLF4
SRF.p3	3.500	SRF
MYFfamily.p2	3.435	MYOD1 MYF6 MYF5 MYOG
NR6A1.p2	3.102	NR6A1
STAT1,3.p3	3.078	STAT1 STAT3
AAUACUG	3.014
AGUGGUU	2.959
AGCACCA	2.797
UCCAGUU	2.699
ELF1,2,4.p2	2.697	ELF2 ELF1 ELF4
SPIB.p2	2.566	SPIB
TLX1..3_NFIC{dimer}.p2	2.535	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
AHR_ARNT_ARNT2.p2	2.405	ARNT AHR ARNT2
TFAP4.p2	2.349	TFAP4
GATA1..3.p2	2.151	GATA1 GATA2 GATA3
HIF1A.p2	2.125	HIF1A
AAGGCAC	2.077
MZF1.p2	2.066	MZF1
GGAAUGU	2.055
TP53.p2	2.012	TP53
CUUUGGU	1.926
FOS_FOS{B,L1}_JUN{B,D}.p2	1.770	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NFE2L1.p2	1.738	NFE2L1
GUAAACA	1.710
NKX3-2.p2	1.708	NKX3-2
ACAGUAU	1.631
HIC1.p2	1.623	HIC1
NFKB1_REL_RELA.p2	1.618	RELA REL NFKB1
HBP1_HMGB_SSRP1_UBTF.p2	1.592	HMGB2 HMGB3 SSRP1 UBTF HBP1
GUGCAAA	1.568
AACGGAA	1.563
CDC5L.p2	1.552	CDC5L
ZNF384.p2	1.536	ZNF384
UCAAGUA	1.520
RXR{A,B,G}.p2	1.458	RXRA RXRB RXRG
UCACAUU	1.450
CEBPA,B_DDIT3.p2	1.443	DDIT3 CEBPA CEBPB
AAUGCCC	1.437
FOXQ1.p2	1.429	FOXQ1
AAGGUGC	1.390
NFE2.p2	1.306	NFE2
MYBL2.p2	1.298	MYBL2
IKZF2.p2	1.297	IKZF2
MTF1.p2	1.280	MTF1
PRDM1.p3	1.186	PRDM1
GCAGCAU	1.149
ZNF148.p2	1.144	ZNF148
NFE2L2.p2	1.111	NFE2L2
ZBTB6.p2	1.053	ZBTB6
NFIX.p2	1.051	NFIX
AUUGCAC	1.006
HOX{A6,A7,B6,B7}.p2	0.995	HOXB6 HOXA7 HOXB7 HOXA6
PRRX1,2.p2	0.921	PRRX2 PRRX1
POU5F1_SOX2{dimer}.p2	0.862	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
EP300.p2	0.827	EP300
GTF2I.p2	0.786	GTF2I
UGAAAUG	0.762
TLX2.p2	0.754	TLX2
CDX1,2,4.p2	0.742	CDX1 CDX2 CDX4
UAAUGCU	0.718
FEV.p2	0.717	FEV
BACH2.p2	0.716	BACH2
UUGGUCC	0.711
NHLH1,2.p2	0.695	NHLH1 NHLH2
AUGACAC	0.676
GGCAAGA	0.670
HNF1A.p2	0.631	HNF1A
GAGAACU	0.630
FOSL2.p2	0.607	FOSL2
STAT2,4,6.p2	0.598	STAT2 STAT4 STAT6
RREB1.p2	0.594	RREB1
CACAGUG	0.590
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	0.566	ARNT MAX MYC USF1 BHLHB2 ARNT2
HLF.p2	0.532	HLF
FOXL1.p2	0.525	FOXL1
ACAGUAC	0.502
HMGA1,2.p2	0.477	HMGA1 HMGA2
JUN.p2	0.472	JUN JUND JUNB
MSX1,2.p2	0.464	MSX1 MSX2
TCF4_dimer.p2	0.464	TCF4
AGGUAGU	0.441
GUAGUGU	0.441
AAAGUGC	0.437
ESR1.p2	0.433	ESR1
CGUACCG	0.415
PDX1.p2	0.401	PDX1
TFEB.p2	0.387	TFEB
PATZ1.p2	0.380	PATZ1
POU3F1..4.p2	0.368	POU3F1 POU3F3 POU3F2 POU3F4
ETS1,2.p2	0.365	ETS2 ETS1
EHF.p2	0.342	EHF
TFCP2.p2	0.298	TFCP2
T.p2	0.281	T
PAX8.p2	0.280	PAX8
AACCGUU	0.270
ADNP_IRX_SIX_ZHX.p2	0.248	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UAAGACG	0.236
LEF1_TCF7_TCF7L1,2.p2	0.234	TCF7 TCF7L2 LEF1 TCF7L1
SREBF1,2.p2	0.216	SREBF1 SREBF2
NANOG{mouse}.p2	0.216	NANOG
CUACAGU	0.214
EOMES.p2	0.206	EOMES
ACCCUGU	0.204
CCAGUGU	0.188
ARID5B.p2	0.181	ARID5B
UUGGCAC	0.179
PAX6.p2	0.170	PAX6
FOX{C1,C2}.p2	0.154	FOXC1 FOXC2
FOX{F1,F2,J1}.p2	0.140	FOXF2 FOXJ1 FOXF1
CTCF.p2	0.130	CTCF
SOX17.p2	0.130	SOX17
GFI1B.p2	0.129	GFI1B
ATF2.p2	0.123	ATF2
GGAGUGU	0.107
GAUAUGU	0.088
UCCCUUU	0.083
AAUCUCU	0.075
ZNF423.p2	0.074	ZNF423
GFI1.p2	0.073	GFI1
NFATC1..3.p2	0.068	NFATC3 NFATC2 NFATC1
CGUGUCU	0.058
POU6F1.p2	0.058	POU6F1
CCAGCAU	0.055
GAGAUGA	0.040
GZF1.p2	-0.002	GZF1
FOXO1,3,4.p2	-0.006	FOXO1 FOXO4 FOXO3
SOX{8,9,10}.p2	-0.008	SOX9 SOX8 SOX10
GGACGGA	-0.009
HSF1,2.p2	-0.014	HSF1 HSF2
ACCCGUA	-0.031
UGACCUA	-0.037
ZBTB16.p2	-0.054	ZBTB16
FOXD3.p2	-0.056	FOXD3
UAAGACU	-0.056
PAX3,7.p2	-0.065	PAX7 PAX3
EVI1.p2	-0.076	EVI1
DMAP1_NCOR{1,2}_SMARC.p2	-0.078	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AAUCUCA	-0.082
HAND1,2.p2	-0.085	HAND1 HAND2
PPARG.p2	-0.090	PPARG
VSX1,2.p2	-0.100	VSX2 VSX1
GTF2A1,2.p2	-0.103	GTF2A1 GTF2A2
PAX5.p2	-0.105	PAX5
GCUGGUG	-0.109
TFAP2B.p2	-0.113	TFAP2B
BPTF.p2	-0.118	BPTF
GATA6.p2	-0.144	GATA6
HNF4A_NR2F1,2.p2	-0.169	NR2F1 NR2F2 HNF4A
GUAACAG	-0.214
NKX6-1,2.p2	-0.231	NKX6-1 NKX6-2
GAGGUAG	-0.233
AGCAGCG	-0.255
SPZ1.p2	-0.276	SPZ1
ESRRA.p2	-0.302	ESRRA
UGCAUUG	-0.307
ATF5_CREB3.p2	-0.317	ATF5 CREB3
HOX{A5,B5}.p2	-0.318	HOXB5 HOXA5
UUGUUCG	-0.327
UGUGCGU	-0.345
SP1.p2	-0.351	SP1
TAL1_TCF{3,4,12}.p2	-0.357	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CRX.p2	-0.397	CRX
FOX{I1,J2}.p2	-0.398	FOXI1 FOXJ2
NKX2-3_NKX2-5.p2	-0.414	NKX2-5 NKX2-3
SRY.p2	-0.437	SRY
AACACUG	-0.444
TFDP1.p2	-0.468	TFDP1
GAUCAGA	-0.484
RBPJ.p2	-0.494	RBPJ
AACCUGG	-0.504
RXRG_dimer.p3	-0.528	NR1H2 RXRA PPARG PPARA RXRB RXRG
NR3C1.p2	-0.540	NR3C1
AUGUGCC	-0.542
ZIC1..3.p2	-0.571	ZIC1 ZIC2 ZIC3
ACUGGCC	-0.583
HOXA9_MEIS1.p2	-0.621	MEIS1 HOXA9
AGCAGCA	-0.644
GLI1..3.p2	-0.667	GLI1 GLI2 GLI3
GUCAGUU	-0.677
EWSR1-FLI1.p2	-0.701	FLI1 EWSR1
ACUGCAU	-0.702
SPI1.p2	-0.720	SPI1
AUGGCAC	-0.721
UCACAGU	-0.737
RFX1..5_RFXANK_RFXAP.p2	-0.746	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
EGR1..3.p2	-0.750	EGR3 EGR1 EGR2
PITX1..3.p2	-0.754	PITX2 PITX3 PITX1
CCUUCAU	-0.757
CUX2.p2	-0.773	CUX2
HOX{A4,D4}.p2	-0.784	HOXA4 HOXD4
POU1F1.p2	-0.805	POU1F1
NR5A1,2.p2	-0.860	NR5A1 NR5A2
IRF1,2,7.p3	-0.880	IRF1 IRF2 IRF7
GGAAGAC	-0.925
NFIL3.p2	-0.926	NFIL3
PBX1.p2	-0.941	PBX1
CAGUGCA	-0.964
AGCUGCC	-0.984
GAUUGUC	-1.011
HMX1.p2	-1.024	HMX1
YY1.p2	-1.026	YY1
STAT5{A,B}.p2	-1.052	STAT5B STAT5A
NKX2-2,8.p2	-1.065	NKX2-2 NKX2-8
AR.p2	-1.079	AR
FOX{D1,D2}.p2	-1.083	FOXD2 FOXD1
UUGGCAA	-1.089
NANOG.p2	-1.095	NANOG
AGCUUAU	-1.118
PAX4.p2	-1.137	PAX4
DBP.p2	-1.208	DBP
CCCUGAG	-1.232
SOX2.p2	-1.239	SOX2
RORA.p2	-1.240	RORA
FOXP3.p2	-1.255	FOXP3
UGCAUAG	-1.264
LMO2.p2	-1.266	LMO2
MAZ.p2	-1.304	MAZ
SOX5.p2	-1.350	SOX5
AIRE.p2	-1.380	AIRE
ONECUT1,2.p2	-1.401	ONECUT2 ONECUT1
GGCUCAG	-1.404
NKX3-1.p2	-1.427	NKX3-1
MAFB.p2	-1.461	MAFB
IKZF1.p2	-1.486	IKZF1
AACAGUC	-1.498
NR1H4.p2	-1.517	NR1H4
AAGUGCU	-1.533
bHLH_family.p2	-1.541	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
FOXA2.p3	-1.547	FOXA2
POU5F1.p2	-1.607	POU5F1
RXRA_VDR{dimer}.p2	-1.618	VDR	$logo of RXRA_VDR{dimer}.p2$
KLF12.p2	-1.634	KLF12
LHX3,4.p2	-1.674	LHX3 LHX4
GGCAGUG	-1.681
REST.p3	-1.686	REST
CAGCAGG	-1.723
TBX4,5.p2	-1.743	TBX5 TBX4
EBF1.p2	-1.846	EBF1
ATF4.p2	-1.852	ATF4
NKX2-1,4.p2	-1.920	NKX2-1 NKX2-4
AUGGCUU	-1.950
ALX1.p2	-1.958	ALX1
EN1,2.p2	-1.972	EN1 EN2
SMAD1..7,9.p2	-1.973	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GCUACAU	-1.994
HES1.p2	-2.016	HES1
ELK1,4_GABP{A,B1}.p3	-2.048	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
FOXN1.p2	-2.065	FOXN1
CREB1.p2	-2.082	CREB1
RUNX1..3.p2	-2.196	RUNX1 RUNX3 RUNX2
UGUGCUU	-2.232
ZFP161.p2	-2.234	ZFP161
AGUGCAA	-2.259
ZEB1.p2	-2.304	ZEB1
CUCCCAA	-2.321
MYOD1.p2	-2.392	MYOD1
NRF1.p2	-2.454	NRF1
POU2F1..3.p2	-2.532	POU2F2 POU2F1 POU2F3
TGIF1.p2	-2.684	TGIF1
ACAUUCA	-2.721
UAUUGCU	-2.769
PAX2.p2	-2.825	PAX2
UUUUUGC	-2.881
MEF2{A,B,C,D}.p2	-2.903	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NR4A2.p2	-2.963	NR4A2
SNAI1..3.p2	-3.320	SNAI2 SNAI1 SNAI3
ZNF143.p2	-4.137	ZNF143
NFY{A,B,C}.p2	-4.223	NFYC NFYB NFYA
MYB.p2	-4.311	MYB
E2F1..5.p2	-10.024	E2F4 E2F5 E2F2 E2F1 E2F3

ISMARA

Project

Navigation

Downloads

Sample name: GNF_2_SmoothMuscle

Sorted z-values for every WM.