ISMARA results: GNF_2

Sample name: GNF_2_Tonsil

Sorted Z-values histogram for the sample GNF_2_Tonsil

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
POU2F1..3.p2	9.188	POU2F2 POU2F1 POU2F3
POU5F1.p2	7.985	POU5F1
FOSL2.p2	6.675	FOSL2
NFKB1_REL_RELA.p2	6.530	RELA REL NFKB1
AR.p2	5.023	AR
CUCCCAA	5.009
SPI1.p2	4.884	SPI1
SNAI1..3.p2	4.669	SNAI2 SNAI1 SNAI3
ZNF148.p2	3.937	ZNF148
UUUUUGC	3.923
ETS1,2.p2	3.608	ETS2 ETS1
PPARG.p2	3.558	PPARG
IRF1,2,7.p3	3.472	IRF1 IRF2 IRF7
HAND1,2.p2	3.346	HAND1 HAND2
TBP.p2	3.252	TBP
RUNX1..3.p2	3.103	RUNX1 RUNX3 RUNX2
TBX4,5.p2	2.983	TBX5 TBX4
NFE2L2.p2	2.972	NFE2L2
POU1F1.p2	2.731	POU1F1
NKX3-2.p2	2.695	NKX3-2
FOX{C1,C2}.p2	2.498	FOXC1 FOXC2
NR3C1.p2	2.407	NR3C1
GATA6.p2	2.224	GATA6
PRDM1.p3	2.206	PRDM1
CDC5L.p2	2.155	CDC5L
POU5F1_SOX2{dimer}.p2	2.114	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NFATC1..3.p2	2.092	NFATC3 NFATC2 NFATC1
ATF6.p2	2.074	ATF6
MEF2{A,B,C,D}.p2	2.060	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
CCCUGAG	2.046
HBP1_HMGB_SSRP1_UBTF.p2	1.963	HMGB2 HMGB3 SSRP1 UBTF HBP1
ZBTB16.p2	1.908	ZBTB16
TLX2.p2	1.888	TLX2
TGIF1.p2	1.886	TGIF1
T.p2	1.886	T
KLF12.p2	1.871	KLF12
LMO2.p2	1.826	LMO2
NR1H4.p2	1.806	NR1H4
NANOG{mouse}.p2	1.709	NANOG
SMAD1..7,9.p2	1.674	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ONECUT1,2.p2	1.656	ONECUT2 ONECUT1
RBPJ.p2	1.641	RBPJ
TFCP2.p2	1.600	TFCP2
SPIB.p2	1.595	SPIB
ESR1.p2	1.585	ESR1
UAUUGCU	1.542
DMAP1_NCOR{1,2}_SMARC.p2	1.497	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CUX2.p2	1.487	CUX2
POU6F1.p2	1.470	POU6F1
NR6A1.p2	1.435	NR6A1
FOXP3.p2	1.402	FOXP3
CTCF.p2	1.382	CTCF
TFDP1.p2	1.351	TFDP1
MZF1.p2	1.309	MZF1
GAGAUGA	1.276
FOX{F1,F2,J1}.p2	1.257	FOXF2 FOXJ1 FOXF1
LHX3,4.p2	1.257	LHX3 LHX4
AAAGUGC	1.240
HNF4A_NR2F1,2.p2	1.147	NR2F1 NR2F2 HNF4A
PATZ1.p2	1.121	PATZ1
NR4A2.p2	1.083	NR4A2
FEV.p2	1.051	FEV
HOXA9_MEIS1.p2	1.042	MEIS1 HOXA9
MYFfamily.p2	1.025	MYOD1 MYF6 MYF5 MYOG
TLX1..3_NFIC{dimer}.p2	0.931	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
MTF1.p2	0.915	MTF1
ZNF423.p2	0.909	ZNF423
MAZ.p2	0.873	MAZ
AGCUUAU	0.872
AUGUGCC	0.863
UAAUGCU	0.861
RXRG_dimer.p3	0.855	NR1H2 RXRA PPARG PPARA RXRB RXRG
AHR_ARNT_ARNT2.p2	0.847	ARNT AHR ARNT2
GUAGUGU	0.826
VSX1,2.p2	0.810	VSX2 VSX1
FOXL1.p2	0.785	FOXL1
MYOD1.p2	0.742	MYOD1
NKX2-1,4.p2	0.736	NKX2-1 NKX2-4
CACAGUG	0.691
ACAGUAC	0.680
AAGUGCU	0.670
AIRE.p2	0.649	AIRE
GAUCAGA	0.646
ACCCUGU	0.618
FOXD3.p2	0.611	FOXD3
RORA.p2	0.599	RORA
AGCACCA	0.591
EN1,2.p2	0.561	EN1 EN2
TFEB.p2	0.550	TFEB
AGCUGCC	0.546
FOXA2.p3	0.523	FOXA2
ZEB1.p2	0.518	ZEB1
NANOG.p2	0.513	NANOG
EP300.p2	0.507	EP300
GLI1..3.p2	0.495	GLI1 GLI2 GLI3
GAGGUAG	0.489
CUUUGGU	0.479
ACAGUAU	0.455
AAUCUCU	0.440
NKX2-2,8.p2	0.433	NKX2-2 NKX2-8
AGCAGCG	0.433
GTF2A1,2.p2	0.428	GTF2A1 GTF2A2
AUGACAC	0.417
RXRA_VDR{dimer}.p2	0.406	VDR	$logo of RXRA_VDR{dimer}.p2$
CRX.p2	0.375	CRX
AAUCUCA	0.368
MYBL2.p2	0.368	MYBL2
ACUGGCC	0.357
CCAGCAU	0.346
AACCUGG	0.337
EVI1.p2	0.337	EVI1
STAT1,3.p3	0.314	STAT1 STAT3
GGAAGAC	0.310
POU3F1..4.p2	0.306	POU3F1 POU3F3 POU3F2 POU3F4
TFAP4.p2	0.303	TFAP4
GGCUCAG	0.301
IKZF2.p2	0.268	IKZF2
AAUGCCC	0.258
AACCGUU	0.248
NKX2-3_NKX2-5.p2	0.235	NKX2-5 NKX2-3
UUGGCAC	0.232
PDX1.p2	0.204	PDX1
TCF4_dimer.p2	0.186	TCF4
UGUGCUU	0.157
STAT5{A,B}.p2	0.147	STAT5B STAT5A
CGUACCG	0.131
GAUUGUC	0.125
SOX17.p2	0.125	SOX17
EBF1.p2	0.122	EBF1
AUGGCAC	0.115
ALX1.p2	0.099	ALX1
HOX{A5,B5}.p2	0.096	HOXB5 HOXA5
ARID5B.p2	0.091	ARID5B
ZNF238.p2	0.068	ZNF238
GAGAACU	0.068
ACAUUCA	0.050
ACUGCAU	0.046
TAL1_TCF{3,4,12}.p2	0.036	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GFI1B.p2	0.014	GFI1B
GAUAUGU	0.006
SRF.p3	-0.001	SRF
ACCCGUA	-0.005
PAX8.p2	-0.010	PAX8
UGCAUAG	-0.013
PITX1..3.p2	-0.027	PITX2 PITX3 PITX1
SREBF1,2.p2	-0.040	SREBF1 SREBF2
GUAACAG	-0.045
GGACGGA	-0.056
ZFP161.p2	-0.068	ZFP161
AACACUG	-0.072
JUN.p2	-0.086	JUN JUND JUNB
PAX3,7.p2	-0.091	PAX7 PAX3
GCAGCAU	-0.093
ZBTB6.p2	-0.098	ZBTB6
UGACCUA	-0.103
UCAAGUA	-0.115
UCCCUUU	-0.120
CEBPA,B_DDIT3.p2	-0.158	DDIT3 CEBPA CEBPB
FOX{D1,D2}.p2	-0.194	FOXD2 FOXD1
UGUGCGU	-0.203
GZF1.p2	-0.213	GZF1
ATF4.p2	-0.215	ATF4
PAX6.p2	-0.216	PAX6
AAGGUGC	-0.216
FOXO1,3,4.p2	-0.226	FOXO1 FOXO4 FOXO3
CREB1.p2	-0.246	CREB1
UGCAUUG	-0.250
GATA1..3.p2	-0.273	GATA1 GATA2 GATA3
CAGCAGG	-0.288
AUGGCUU	-0.290
UUGUUCG	-0.302
GUCAGUU	-0.308
CGUGUCU	-0.317
CUACAGU	-0.319
UAAGACU	-0.328
FOXQ1.p2	-0.331	FOXQ1
BACH2.p2	-0.333	BACH2
CCUUCAU	-0.384
PAX4.p2	-0.391	PAX4
MSX1,2.p2	-0.434	MSX1 MSX2
CDX1,2,4.p2	-0.467	CDX1 CDX2 CDX4
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.470	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
UGAAAUG	-0.485
HLF.p2	-0.510	HLF
GGAGUGU	-0.554
AACGGAA	-0.558
EGR1..3.p2	-0.569	EGR3 EGR1 EGR2
NFIL3.p2	-0.573	NFIL3
GCUACAU	-0.598
ELF1,2,4.p2	-0.611	ELF2 ELF1 ELF4
GTF2I.p2	-0.617	GTF2I
TFAP2{A,C}.p2	-0.631	TFAP2C TFAP2A
CAGUGCA	-0.640
REST.p3	-0.642	REST
NKX3-1.p2	-0.643	NKX3-1
UAAGACG	-0.673
SOX2.p2	-0.687	SOX2
TP53.p2	-0.709	TP53
SOX5.p2	-0.709	SOX5
HMGA1,2.p2	-0.722	HMGA1 HMGA2
AGUGGUU	-0.730
AUUGCAC	-0.745
EOMES.p2	-0.771	EOMES
MAFB.p2	-0.804	MAFB
RREB1.p2	-0.810	RREB1
TEAD1.p2	-0.819	TEAD1 TEAD2 TEAD3 TEAD4
GGCAAGA	-0.821
AAGGCAC	-0.829
NR5A1,2.p2	-0.829	NR5A1 NR5A2
UUGGUCC	-0.866
AACAGUC	-0.897
HNF1A.p2	-0.922	HNF1A
NFE2.p2	-0.926	NFE2
UCACAUU	-0.934
GCUGGUG	-0.935
UUGGCAA	-0.952
AGGUAGU	-0.955
UCACAGU	-0.962
GGCAGUG	-0.979
ZNF384.p2	-0.981	ZNF384
CCAGUGU	-1.001
HMX1.p2	-1.018	HMX1
FOXN1.p2	-1.026	FOXN1
HSF1,2.p2	-1.048	HSF1 HSF2
E2F1..5.p2	-1.060	E2F4 E2F5 E2F2 E2F1 E2F3
AGUGCAA	-1.062
PAX5.p2	-1.063	PAX5
ATF2.p2	-1.091	ATF2
UCCAGUU	-1.107
NFE2L1.p2	-1.141	NFE2L1
NKX6-1,2.p2	-1.155	NKX6-1 NKX6-2
PAX2.p2	-1.156	PAX2
GUGCAAA	-1.191
SPZ1.p2	-1.210	SPZ1
PBX1.p2	-1.253	PBX1
LEF1_TCF7_TCF7L1,2.p2	-1.261	TCF7 TCF7L2 LEF1 TCF7L1
ADNP_IRX_SIX_ZHX.p2	-1.266	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
IKZF1.p2	-1.336	IKZF1
GUAAACA	-1.354
FOX{I1,J2}.p2	-1.432	FOXI1 FOXJ2
NFIX.p2	-1.437	NFIX
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.447	ARNT MAX MYC USF1 BHLHB2 ARNT2
HOX{A4,D4}.p2	-1.454	HOXA4 HOXD4
EWSR1-FLI1.p2	-1.455	FLI1 EWSR1
RXR{A,B,G}.p2	-1.532	RXRA RXRB RXRG
DBP.p2	-1.597	DBP
BPTF.p2	-1.668	BPTF
HIC1.p2	-1.731	HIC1
PRRX1,2.p2	-1.806	PRRX2 PRRX1
AAUACUG	-1.842
ZIC1..3.p2	-1.895	ZIC1 ZIC2 ZIC3
KLF4.p3	-1.947	KLF4
AGCAGCA	-1.966
STAT2,4,6.p2	-2.170	STAT2 STAT4 STAT6
NFY{A,B,C}.p2	-2.234	NFYC NFYB NFYA
HES1.p2	-2.249	HES1
YY1.p2	-2.256	YY1
SOX{8,9,10}.p2	-2.262	SOX9 SOX8 SOX10
ESRRA.p2	-2.285	ESRRA
GFI1.p2	-2.312	GFI1
NHLH1,2.p2	-2.316	NHLH1 NHLH2
GGAAUGU	-2.378
XBP1.p3	-2.419	XBP1
HIF1A.p2	-2.464	HIF1A
EHF.p2	-2.470	EHF
SRY.p2	-2.527	SRY
bHLH_family.p2	-2.822	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HOX{A6,A7,B6,B7}.p2	-2.822	HOXB6 HOXA7 HOXB7 HOXA6
TFAP2B.p2	-3.119	TFAP2B
ATF5_CREB3.p2	-3.680	ATF5 CREB3
ELK1,4_GABP{A,B1}.p3	-3.689	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	-3.949	MYB
RFX1..5_RFXANK_RFXAP.p2	-4.498	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
SP1.p2	-4.840	SP1
ZNF143.p2	-5.269	ZNF143
NRF1.p2	-6.887	NRF1

ISMARA

Project

Navigation

Downloads

Sample name: GNF_2_Tonsil

Sorted z-values for every WM.