ISMARA results: GNF_2

Sample name: GNF_2_cerebellum

Sorted Z-values histogram for the sample GNF_2_cerebellum

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
REST.p3	6.109	REST
GGCAGUG	5.244
KLF12.p2	5.109	KLF12
GTF2I.p2	5.096	GTF2I
CAGCAGG	4.863
RREB1.p2	4.791	RREB1
HIC1.p2	4.700	HIC1
GATA1..3.p2	4.341	GATA1 GATA2 GATA3
MYOD1.p2	4.326	MYOD1
GGAAGAC	4.269
JUN.p2	4.264	JUN JUND JUNB
GGCUCAG	4.190
ZFP161.p2	4.156	ZFP161
TGIF1.p2	4.072	TGIF1
SPZ1.p2	3.945	SPZ1
RFX1..5_RFXANK_RFXAP.p2	3.577	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CUCCCAA	3.544
HOX{A5,B5}.p2	3.498	HOXB5 HOXA5
GTF2A1,2.p2	3.494	GTF2A1 GTF2A2
EVI1.p2	3.440	EVI1
ZIC1..3.p2	3.435	ZIC1 ZIC2 ZIC3
UGUGCUU	3.351
MTF1.p2	3.238	MTF1
NHLH1,2.p2	3.159	NHLH1 NHLH2
AGUGCAA	3.064
UGCAUAG	3.026
MZF1.p2	2.981	MZF1
FOXP3.p2	2.921	FOXP3
PAX2.p2	2.918	PAX2
SMAD1..7,9.p2	2.844	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
MEF2{A,B,C,D}.p2	2.801	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HOX{A6,A7,B6,B7}.p2	2.646	HOXB6 HOXA7 HOXB7 HOXA6
SRY.p2	2.594	SRY
POU5F1.p2	2.587	POU5F1
HAND1,2.p2	2.519	HAND1 HAND2
FOX{I1,J2}.p2	2.518	FOXI1 FOXJ2
AACAGUC	2.506
CACAGUG	2.493
GCUGGUG	2.471
ALX1.p2	2.454	ALX1
UAUUGCU	2.438
HBP1_HMGB_SSRP1_UBTF.p2	2.426	HMGB2 HMGB3 SSRP1 UBTF HBP1
ZBTB6.p2	2.371	ZBTB6
EGR1..3.p2	2.348	EGR3 EGR1 EGR2
AAAGUGC	2.248
TLX1..3_NFIC{dimer}.p2	2.242	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
EN1,2.p2	2.223	EN1 EN2
AUGGCUU	2.188
EBF1.p2	2.140	EBF1
FOX{D1,D2}.p2	2.124	FOXD2 FOXD1
NR5A1,2.p2	2.123	NR5A1 NR5A2
ATF2.p2	2.061	ATF2
CCCUGAG	2.054
UCCCUUU	2.046
TAL1_TCF{3,4,12}.p2	2.046	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CCAGCAU	1.993
FEV.p2	1.968	FEV
RUNX1..3.p2	1.966	RUNX1 RUNX3 RUNX2
UUGGUCC	1.958
MAFB.p2	1.929	MAFB
TFCP2.p2	1.929	TFCP2
TFEB.p2	1.923	TFEB
DBP.p2	1.882	DBP
AGCAGCA	1.844
CTCF.p2	1.763	CTCF
NR1H4.p2	1.744	NR1H4
POU1F1.p2	1.722	POU1F1
LMO2.p2	1.718	LMO2
SNAI1..3.p2	1.706	SNAI2 SNAI1 SNAI3
PATZ1.p2	1.566	PATZ1
STAT2,4,6.p2	1.538	STAT2 STAT4 STAT6
TCF4_dimer.p2	1.506	TCF4
MAZ.p2	1.494	MAZ
UUGGCAC	1.470
AGCUGCC	1.416
MYFfamily.p2	1.397	MYOD1 MYF6 MYF5 MYOG
PAX4.p2	1.373	PAX4
EOMES.p2	1.369	EOMES
NKX2-1,4.p2	1.317	NKX2-1 NKX2-4
NR4A2.p2	1.317	NR4A2
FOX{F1,F2,J1}.p2	1.309	FOXF2 FOXJ1 FOXF1
NKX2-3_NKX2-5.p2	1.283	NKX2-5 NKX2-3
GAGAUGA	1.281
AUUGCAC	1.249
ACAUUCA	1.209
LEF1_TCF7_TCF7L1,2.p2	1.174	TCF7 TCF7L2 LEF1 TCF7L1
RORA.p2	1.167	RORA
HNF4A_NR2F1,2.p2	1.155	NR2F1 NR2F2 HNF4A
ACUGGCC	1.151
SOX{8,9,10}.p2	1.147	SOX9 SOX8 SOX10
IKZF1.p2	1.139	IKZF1
GLI1..3.p2	1.126	GLI1 GLI2 GLI3
HMX1.p2	1.089	HMX1
RXR{A,B,G}.p2	1.064	RXRA RXRB RXRG
AAGUGCU	1.054
ZNF423.p2	1.049	ZNF423
NFIX.p2	1.037	NFIX
HSF1,2.p2	1.026	HSF1 HSF2
GUCAGUU	1.010
AAUACUG	0.998
NR3C1.p2	0.945	NR3C1
GAUCAGA	0.922
GATA6.p2	0.909	GATA6
CGUGUCU	0.906
PDX1.p2	0.895	PDX1
NFIL3.p2	0.849	NFIL3
GUAAACA	0.838
NFE2L1.p2	0.825	NFE2L1
NANOG{mouse}.p2	0.810	NANOG
AIRE.p2	0.770	AIRE
TFAP2{A,C}.p2	0.747	TFAP2C TFAP2A
GGACGGA	0.729
SOX2.p2	0.729	SOX2
FOX{C1,C2}.p2	0.706	FOXC1 FOXC2
ZNF238.p2	0.702	ZNF238
UGUGCGU	0.698
PAX3,7.p2	0.694	PAX7 PAX3
ZEB1.p2	0.679	ZEB1
PRRX1,2.p2	0.678	PRRX2 PRRX1
PAX6.p2	0.654	PAX6
HNF1A.p2	0.643	HNF1A
GGCAAGA	0.641
AR.p2	0.625	AR
AACGGAA	0.598
ATF6.p2	0.591	ATF6
POU6F1.p2	0.572	POU6F1
GCUACAU	0.560
CUACAGU	0.560
CUX2.p2	0.524	CUX2
ONECUT1,2.p2	0.510	ONECUT2 ONECUT1
UGAAAUG	0.507
NANOG.p2	0.497	NANOG
SP1.p2	0.478	SP1
STAT1,3.p3	0.470	STAT1 STAT3
GAGAACU	0.458
TBP.p2	0.418	TBP
GFI1.p2	0.416	GFI1
HES1.p2	0.415	HES1
GZF1.p2	0.384	GZF1
GUGCAAA	0.376
GGAGUGU	0.375
SREBF1,2.p2	0.374	SREBF1 SREBF2
ACCCUGU	0.371
ESRRA.p2	0.323	ESRRA
RXRA_VDR{dimer}.p2	0.298	VDR	$logo of RXRA_VDR{dimer}.p2$
IKZF2.p2	0.276	IKZF2
PAX8.p2	0.276	PAX8
LHX3,4.p2	0.268	LHX3 LHX4
AGGUAGU	0.250
POU5F1_SOX2{dimer}.p2	0.234	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
ARID5B.p2	0.229	ARID5B
AUGACAC	0.223
GAUAUGU	0.201
STAT5{A,B}.p2	0.185	STAT5B STAT5A
TEAD1.p2	0.184	TEAD1 TEAD2 TEAD3 TEAD4
HLF.p2	0.179	HLF
UAAGACG	0.167
TBX4,5.p2	0.153	TBX5 TBX4
NKX6-1,2.p2	0.104	NKX6-1 NKX6-2
AGCAGCG	0.097
GAGGUAG	0.080
GCAGCAU	0.074
NR6A1.p2	0.058	NR6A1
AAUGCCC	0.034
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.002	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
EWSR1-FLI1.p2	-0.006	FLI1 EWSR1
AAUCUCA	-0.008
CEBPA,B_DDIT3.p2	-0.012	DDIT3 CEBPA CEBPB
GFI1B.p2	-0.050	GFI1B
ACCCGUA	-0.068
CCUUCAU	-0.090
UUGUUCG	-0.134
CDC5L.p2	-0.149	CDC5L
ZNF384.p2	-0.154	ZNF384
POU2F1..3.p2	-0.184	POU2F2 POU2F1 POU2F3
HOXA9_MEIS1.p2	-0.198	MEIS1 HOXA9
GAUUGUC	-0.204
ACUGCAU	-0.214
MSX1,2.p2	-0.236	MSX1 MSX2
ESR1.p2	-0.243	ESR1
AACCGUU	-0.248
NKX3-1.p2	-0.249	NKX3-1
CGUACCG	-0.260
UAAGACU	-0.283
SPIB.p2	-0.307	SPIB
NKX3-2.p2	-0.319	NKX3-2
ETS1,2.p2	-0.338	ETS2 ETS1
AGCACCA	-0.339
UGACCUA	-0.343
PRDM1.p3	-0.395	PRDM1
AAUCUCU	-0.424
POU3F1..4.p2	-0.430	POU3F1 POU3F3 POU3F2 POU3F4
CAGUGCA	-0.434
HMGA1,2.p2	-0.448	HMGA1 HMGA2
VSX1,2.p2	-0.455	VSX2 VSX1
FOSL2.p2	-0.501	FOSL2
AACCUGG	-0.506
AUGUGCC	-0.555
T.p2	-0.558	T
MYBL2.p2	-0.569	MYBL2
FOXO1,3,4.p2	-0.599	FOXO1 FOXO4 FOXO3
TFAP2B.p2	-0.661	TFAP2B
FOXL1.p2	-0.708	FOXL1
UGCAUUG	-0.722
FOXQ1.p2	-0.778	FOXQ1
GUAGUGU	-0.809
UCACAGU	-0.831
PBX1.p2	-0.848	PBX1
AAGGUGC	-0.917
CDX1,2,4.p2	-1.011	CDX1 CDX2 CDX4
CRX.p2	-1.013	CRX
AACACUG	-1.051
CCAGUGU	-1.055
ACAGUAC	-1.073
FOXA2.p3	-1.091	FOXA2
FOXN1.p2	-1.164	FOXN1
SOX17.p2	-1.199	SOX17
EP300.p2	-1.222	EP300
HOX{A4,D4}.p2	-1.232	HOXA4 HOXD4
AUGGCAC	-1.235
NKX2-2,8.p2	-1.240	NKX2-2 NKX2-8
AGCUUAU	-1.326
BACH2.p2	-1.341	BACH2
TLX2.p2	-1.342	TLX2
NFE2.p2	-1.359	NFE2
ATF4.p2	-1.379	ATF4
SOX5.p2	-1.379	SOX5
bHLH_family.p2	-1.387	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
BPTF.p2	-1.410	BPTF
NFE2L2.p2	-1.425	NFE2L2
UUGGCAA	-1.427
ACAGUAU	-1.450
PITX1..3.p2	-1.487	PITX2 PITX3 PITX1
ADNP_IRX_SIX_ZHX.p2	-1.505	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
RBPJ.p2	-1.520	RBPJ
PPARG.p2	-1.537	PPARG
ZBTB16.p2	-1.585	ZBTB16
UCACAUU	-1.610
UUUUUGC	-1.641
NFATC1..3.p2	-1.711	NFATC3 NFATC2 NFATC1
UCCAGUU	-1.806
FOXD3.p2	-1.889	FOXD3
SRF.p3	-1.910	SRF
TP53.p2	-2.002	TP53
CREB1.p2	-2.029	CREB1
GUAACAG	-2.122
UAAUGCU	-2.192
AHR_ARNT_ARNT2.p2	-2.233	ARNT AHR ARNT2
NFKB1_REL_RELA.p2	-2.259	RELA REL NFKB1
AGUGGUU	-2.357
GGAAUGU	-2.363
RXRG_dimer.p3	-2.550	NR1H2 RXRA PPARG PPARA RXRB RXRG
DMAP1_NCOR{1,2}_SMARC.p2	-2.625	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CUUUGGU	-2.733
HIF1A.p2	-2.736	HIF1A
ZNF143.p2	-2.800	ZNF143
TFAP4.p2	-2.858	TFAP4
SPI1.p2	-2.971	SPI1
ATF5_CREB3.p2	-3.080	ATF5 CREB3
PAX5.p2	-3.086	PAX5
ZNF148.p2	-3.178	ZNF148
IRF1,2,7.p3	-3.279	IRF1 IRF2 IRF7
UCAAGUA	-3.318
NRF1.p2	-3.577	NRF1
ELK1,4_GABP{A,B1}.p3	-4.010	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NFY{A,B,C}.p2	-4.454	NFYC NFYB NFYA
KLF4.p3	-4.569	KLF4
XBP1.p3	-4.597	XBP1
E2F1..5.p2	-4.893	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-5.271	MYB
TFDP1.p2	-5.444	TFDP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-5.595	ARNT MAX MYC USF1 BHLHB2 ARNT2
EHF.p2	-5.613	EHF
AAGGCAC	-5.614
ELF1,2,4.p2	-6.206	ELF2 ELF1 ELF4
YY1.p2	-6.416	YY1

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Sample name: GNF_2_cerebellum

Sorted z-values for every WM.