ISMARA results: GNF_2_globuspallidus

Sample name: GNF_2_globuspallidus

Sorted Z-values histogram for the sample GNF_2_globuspallidus

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	7.104
REST.p3	6.279	REST
RFX1..5_RFXANK_RFXAP.p2	6.036	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
KLF12.p2	5.690	KLF12
RREB1.p2	5.115	RREB1
UGUGCUU	4.908
GGCAGUG	4.730
HIC1.p2	4.692	HIC1
JUN.p2	4.360	JUN JUND JUNB
MTF1.p2	4.269	MTF1
MYOD1.p2	3.978	MYOD1
NHLH1,2.p2	3.847	NHLH1 NHLH2
UUUUUGC	3.788
GGCUCAG	3.763
TGIF1.p2	3.738	TGIF1
NKX2-3_NKX2-5.p2	3.728	NKX2-5 NKX2-3
GATA1..3.p2	3.667	GATA1 GATA2 GATA3
POU5F1.p2	3.546	POU5F1
GTF2I.p2	3.491	GTF2I
CAGCAGG	3.480
GTF2A1,2.p2	3.415	GTF2A1 GTF2A2
TCF4_dimer.p2	3.247	TCF4
TAL1_TCF{3,4,12}.p2	3.196	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
SMAD1..7,9.p2	3.132	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ZIC1..3.p2	3.020	ZIC1 ZIC2 ZIC3
MZF1.p2	3.012	MZF1
EBF1.p2	2.885	EBF1
HOX{A5,B5}.p2	2.813	HOXB5 HOXA5
EVI1.p2	2.696	EVI1
EGR1..3.p2	2.670	EGR3 EGR1 EGR2
HOX{A6,A7,B6,B7}.p2	2.643	HOXB6 HOXA7 HOXB7 HOXA6
UCCCUUU	2.580
GLI1..3.p2	2.512	GLI1 GLI2 GLI3
ALX1.p2	2.403	ALX1
TFCP2.p2	2.324	TFCP2
FOXP3.p2	2.223	FOXP3
NR1H4.p2	2.143	NR1H4
RXR{A,B,G}.p2	2.130	RXRA RXRB RXRG
MEF2{A,B,C,D}.p2	2.092	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UGCAUAG	2.053
PAX2.p2	2.049	PAX2
TBX4,5.p2	2.037	TBX5 TBX4
STAT1,3.p3	2.026	STAT1 STAT3
MAZ.p2	2.017	MAZ
GGAAGAC	2.016
UUGGUCC	1.991
LMO2.p2	1.987	LMO2
IKZF2.p2	1.978	IKZF2
LEF1_TCF7_TCF7L1,2.p2	1.918	TCF7 TCF7L2 LEF1 TCF7L1
SNAI1..3.p2	1.841	SNAI2 SNAI1 SNAI3
FOX{I1,J2}.p2	1.840	FOXI1 FOXJ2
AUUGCAC	1.814
HAND1,2.p2	1.769	HAND1 HAND2
GGCAAGA	1.718
ZFP161.p2	1.709	ZFP161
ATF2.p2	1.692	ATF2
AUGGCUU	1.667
CCAGCAU	1.666
PAX4.p2	1.655	PAX4
CACAGUG	1.650
AAAGUGC	1.595
DBP.p2	1.595	DBP
SPZ1.p2	1.555	SPZ1
GAGAACU	1.536
SOX{8,9,10}.p2	1.520	SOX9 SOX8 SOX10
GFI1.p2	1.505	GFI1
NR4A2.p2	1.488	NR4A2
FEV.p2	1.450	FEV
ACAUUCA	1.442
ZBTB6.p2	1.439	ZBTB6
NANOG{mouse}.p2	1.434	NANOG
LHX3,4.p2	1.413	LHX3 LHX4
GUCAGUU	1.392
UCACAGU	1.375
GUGCAAA	1.355
CCCUGAG	1.348
HMX1.p2	1.318	HMX1
POU1F1.p2	1.304	POU1F1
CUACAGU	1.281
SRY.p2	1.244	SRY
UAUUGCU	1.240
UAAGACG	1.239
IKZF1.p2	1.213	IKZF1
FOXO1,3,4.p2	1.169	FOXO1 FOXO4 FOXO3
NKX2-1,4.p2	1.151	NKX2-1 NKX2-4
GUAAACA	1.140
GAGAUGA	1.112
RUNX1..3.p2	1.103	RUNX1 RUNX3 RUNX2
AGUGCAA	1.084
MAFB.p2	1.078	MAFB
AAUACUG	1.063
NFIL3.p2	1.016	NFIL3
NFE2.p2	0.997	NFE2
STAT2,4,6.p2	0.992	STAT2 STAT4 STAT6
PRRX1,2.p2	0.992	PRRX2 PRRX1
NR5A1,2.p2	0.969	NR5A1 NR5A2
GCUGGUG	0.942
EWSR1-FLI1.p2	0.938	FLI1 EWSR1
AGCUGCC	0.928
SOX2.p2	0.918	SOX2
SREBF1,2.p2	0.910	SREBF1 SREBF2
TLX1..3_NFIC{dimer}.p2	0.880	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HNF4A_NR2F1,2.p2	0.879	NR2F1 NR2F2 HNF4A
UUGGCAC	0.877
RORA.p2	0.856	RORA
PAX6.p2	0.849	PAX6
AAGUGCU	0.844
AACAGUC	0.826
CGUGUCU	0.820
NANOG.p2	0.809	NANOG
UGAAAUG	0.808
ZEB1.p2	0.772	ZEB1
ACCCUGU	0.769
CDC5L.p2	0.755	CDC5L
EN1,2.p2	0.741	EN1 EN2
SP1.p2	0.735	SP1
UAAGACU	0.704
MYFfamily.p2	0.699	MYOD1 MYF6 MYF5 MYOG
GCAGCAU	0.654
ESRRA.p2	0.634	ESRRA
NFE2L1.p2	0.590	NFE2L1
UGUGCGU	0.590
GAUCAGA	0.583
ACUGGCC	0.577
ZNF423.p2	0.572	ZNF423
CUX2.p2	0.554	CUX2
NKX3-1.p2	0.530	NKX3-1
AAUCUCU	0.530
PAX3,7.p2	0.514	PAX7 PAX3
AUGACAC	0.512
SOX5.p2	0.511	SOX5
FOXL1.p2	0.481	FOXL1
CTCF.p2	0.437	CTCF
PDX1.p2	0.393	PDX1
HSF1,2.p2	0.388	HSF1 HSF2
GZF1.p2	0.387	GZF1
STAT5{A,B}.p2	0.378	STAT5B STAT5A
AACGGAA	0.376
RXRA_VDR{dimer}.p2	0.368	VDR	$logo of RXRA_VDR{dimer}.p2$
GATA6.p2	0.363	GATA6
AGCAGCG	0.357
AAGGUGC	0.330
FOX{F1,F2,J1}.p2	0.261	FOXF2 FOXJ1 FOXF1
PAX8.p2	0.253	PAX8
TLX2.p2	0.208	TLX2
AIRE.p2	0.202	AIRE
CAGUGCA	0.200
GGACGGA	0.197
UGCAUUG	0.176
TFEB.p2	0.159	TFEB
CGUACCG	0.154
GAGGUAG	0.150
HBP1_HMGB_SSRP1_UBTF.p2	0.145	HMGB2 HMGB3 SSRP1 UBTF HBP1
HLF.p2	0.145	HLF
HOXA9_MEIS1.p2	0.134	MEIS1 HOXA9
ETS1,2.p2	0.130	ETS2 ETS1
MYBL2.p2	0.118	MYBL2
CEBPA,B_DDIT3.p2	0.099	DDIT3 CEBPA CEBPB
UGACCUA	0.089
GCUACAU	0.088
AGCAGCA	0.073
FOX{C1,C2}.p2	0.063	FOXC1 FOXC2
NR3C1.p2	0.048	NR3C1
HNF1A.p2	-0.027	HNF1A
AACCGUU	-0.052
AAUCUCA	-0.065
ACUGCAU	-0.068
AGGUAGU	-0.080
HMGA1,2.p2	-0.082	HMGA1 HMGA2
ACCCGUA	-0.090
FOX{D1,D2}.p2	-0.127	FOXD2 FOXD1
NR6A1.p2	-0.127	NR6A1
AACACUG	-0.130
AR.p2	-0.132	AR
ZNF238.p2	-0.139	ZNF238
GGAGUGU	-0.140
NFATC1..3.p2	-0.161	NFATC3 NFATC2 NFATC1
NFIX.p2	-0.166	NFIX
GAUAUGU	-0.174
MSX1,2.p2	-0.202	MSX1 MSX2
TFAP2B.p2	-0.235	TFAP2B
AAUGCCC	-0.251
POU3F1..4.p2	-0.277	POU3F1 POU3F3 POU3F2 POU3F4
HOX{A4,D4}.p2	-0.288	HOXA4 HOXD4
POU5F1_SOX2{dimer}.p2	-0.305	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
T.p2	-0.309	T
GFI1B.p2	-0.313	GFI1B
ARID5B.p2	-0.316	ARID5B
TEAD1.p2	-0.358	TEAD1 TEAD2 TEAD3 TEAD4
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.373	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
FOSL2.p2	-0.391	FOSL2
UUGUUCG	-0.403
NKX6-1,2.p2	-0.412	NKX6-1 NKX6-2
POU6F1.p2	-0.490	POU6F1
AACCUGG	-0.507
GAUUGUC	-0.518
EOMES.p2	-0.519	EOMES
AGCUUAU	-0.528
HES1.p2	-0.530	HES1
POU2F1..3.p2	-0.542	POU2F2 POU2F1 POU2F3
CCUUCAU	-0.572
TFAP2{A,C}.p2	-0.632	TFAP2C TFAP2A
VSX1,2.p2	-0.663	VSX2 VSX1
ESR1.p2	-0.680	ESR1
ADNP_IRX_SIX_ZHX.p2	-0.736	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
AUGGCAC	-0.917
CCAGUGU	-0.949
CDX1,2,4.p2	-0.959	CDX1 CDX2 CDX4
ZBTB16.p2	-0.979	ZBTB16
AUGUGCC	-1.014
CRX.p2	-1.060	CRX
GUAACAG	-1.067
TFAP4.p2	-1.067	TFAP4
ONECUT1,2.p2	-1.107	ONECUT2 ONECUT1
UUGGCAA	-1.175
PRDM1.p3	-1.203	PRDM1
PITX1..3.p2	-1.245	PITX2 PITX3 PITX1
NFE2L2.p2	-1.255	NFE2L2
FOXD3.p2	-1.274	FOXD3
DMAP1_NCOR{1,2}_SMARC.p2	-1.303	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ZNF384.p2	-1.334	ZNF384
ATF5_CREB3.p2	-1.352	ATF5 CREB3
AGCACCA	-1.387
PPARG.p2	-1.388	PPARG
PBX1.p2	-1.423	PBX1
NKX2-2,8.p2	-1.519	NKX2-2 NKX2-8
RBPJ.p2	-1.520	RBPJ
FOXQ1.p2	-1.566	FOXQ1
UAAUGCU	-1.574
NKX3-2.p2	-1.595	NKX3-2
FOXN1.p2	-1.609	FOXN1
GUAGUGU	-1.653
CREB1.p2	-1.653	CREB1
ACAGUAC	-1.697
AGUGGUU	-1.808
IRF1,2,7.p3	-1.832	IRF1 IRF2 IRF7
TBP.p2	-1.944	TBP
FOXA2.p3	-1.956	FOXA2
ZNF148.p2	-1.966	ZNF148
PATZ1.p2	-1.972	PATZ1
EP300.p2	-1.991	EP300
SPIB.p2	-2.055	SPIB
TP53.p2	-2.063	TP53
UCACAUU	-2.068
UCAAGUA	-2.133
PAX5.p2	-2.137	PAX5
BPTF.p2	-2.203	BPTF
ATF6.p2	-2.204	ATF6
ACAGUAU	-2.251
UCCAGUU	-2.303
AHR_ARNT_ARNT2.p2	-2.326	ARNT AHR ARNT2
SOX17.p2	-2.464	SOX17
BACH2.p2	-2.475	BACH2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-2.522	ARNT MAX MYC USF1 BHLHB2 ARNT2
KLF4.p3	-2.525	KLF4
SRF.p3	-2.720	SRF
HIF1A.p2	-2.733	HIF1A
GGAAUGU	-2.800
MYB.p2	-2.948	MYB
RXRG_dimer.p3	-2.991	NR1H2 RXRA PPARG PPARA RXRB RXRG
EHF.p2	-3.141	EHF
CUUUGGU	-3.311
NFKB1_REL_RELA.p2	-3.386	RELA REL NFKB1
ATF4.p2	-3.411	ATF4
SPI1.p2	-3.593	SPI1
bHLH_family.p2	-4.218	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ZNF143.p2	-4.561	ZNF143
XBP1.p3	-4.593	XBP1
ELK1,4_GABP{A,B1}.p3	-5.036	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
AAGGCAC	-5.262
NRF1.p2	-5.857	NRF1
TFDP1.p2	-6.165	TFDP1
E2F1..5.p2	-6.691	E2F4 E2F5 E2F2 E2F1 E2F3
ELF1,2,4.p2	-6.713	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	-7.121	NFYC NFYB NFYA
YY1.p2	-8.424	YY1

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Sample name: GNF_2_globuspallidus

Sorted z-values for every WM.