ISMARA results: GNF_2_lymphomaburkittsRaji

Sample name: GNF_2_lymphomaburkittsRaji

Sorted Z-values histogram for the sample GNF_2_lymphomaburkittsRaji

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
NFKB1_REL_RELA.p2	6.011	RELA REL NFKB1
POU2F1..3.p2	4.750	POU2F2 POU2F1 POU2F3
POU5F1.p2	4.722	POU5F1
PATZ1.p2	4.467	PATZ1
ZNF423.p2	4.370	ZNF423
ZNF148.p2	4.218	ZNF148
HNF4A_NR2F1,2.p2	4.081	NR2F1 NR2F2 HNF4A
NFY{A,B,C}.p2	3.800	NFYC NFYB NFYA
YY1.p2	3.711	YY1
bHLH_family.p2	3.648	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	3.526	HIF1A
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.317	ARNT MAX MYC USF1 BHLHB2 ARNT2
GLI1..3.p2	3.255	GLI1 GLI2 GLI3
IRF1,2,7.p3	3.184	IRF1 IRF2 IRF7
NANOG.p2	3.167	NANOG
CEBPA,B_DDIT3.p2	3.089	DDIT3 CEBPA CEBPB
PITX1..3.p2	2.980	PITX2 PITX3 PITX1
HAND1,2.p2	2.974	HAND1 HAND2
RUNX1..3.p2	2.965	RUNX1 RUNX3 RUNX2
NRF1.p2	2.948	NRF1
LMO2.p2	2.944	LMO2
ZNF143.p2	2.911	ZNF143
CCCUGAG	2.863
NR4A2.p2	2.710	NR4A2
NFE2L2.p2	2.572	NFE2L2
HES1.p2	2.521	HES1
ESRRA.p2	2.446	ESRRA
FOX{F1,F2,J1}.p2	2.435	FOXF2 FOXJ1 FOXF1
GATA6.p2	2.399	GATA6
PRDM1.p3	2.289	PRDM1
ONECUT1,2.p2	1.998	ONECUT2 ONECUT1
NKX3-2.p2	1.870	NKX3-2
NR3C1.p2	1.791	NR3C1
UAUUGCU	1.780
SPIB.p2	1.719	SPIB
TFAP2{A,C}.p2	1.689	TFAP2C TFAP2A
NR1H4.p2	1.648	NR1H4
DMAP1_NCOR{1,2}_SMARC.p2	1.627	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
HOXA9_MEIS1.p2	1.620	MEIS1 HOXA9
RXRA_VDR{dimer}.p2	1.599	VDR	$logo of RXRA_VDR{dimer}.p2$
NR5A1,2.p2	1.560	NR5A1 NR5A2
NKX2-1,4.p2	1.555	NKX2-1 NKX2-4
NANOG{mouse}.p2	1.553	NANOG
ZEB1.p2	1.538	ZEB1
CUCCCAA	1.533
GGCUCAG	1.504
GATA1..3.p2	1.473	GATA1 GATA2 GATA3
HNF1A.p2	1.407	HNF1A
POU5F1_SOX2{dimer}.p2	1.395	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
TP53.p2	1.359	TP53
TGIF1.p2	1.292	TGIF1
GFI1B.p2	1.276	GFI1B
FOX{C1,C2}.p2	1.275	FOXC1 FOXC2
AUGGCUU	1.271
GTF2A1,2.p2	1.231	GTF2A1 GTF2A2
IKZF1.p2	1.210	IKZF1
ADNP_IRX_SIX_ZHX.p2	1.197	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CAGCAGG	1.194
ATF4.p2	1.182	ATF4
UGCAUUG	1.156
MYOD1.p2	1.141	MYOD1
RBPJ.p2	1.127	RBPJ
ETS1,2.p2	1.119	ETS2 ETS1
KLF12.p2	1.111	KLF12
HOX{A5,B5}.p2	1.109	HOXB5 HOXA5
SPI1.p2	1.104	SPI1
CTCF.p2	1.071	CTCF
CACAGUG	1.005
GGCAGUG	1.003
AUGGCAC	0.985
FOSL2.p2	0.985	FOSL2
NKX2-2,8.p2	0.984	NKX2-2 NKX2-8
FOXQ1.p2	0.981	FOXQ1
POU1F1.p2	0.966	POU1F1
EN1,2.p2	0.964	EN1 EN2
FOXL1.p2	0.907	FOXL1
RORA.p2	0.881	RORA
ACCCUGU	0.873
BPTF.p2	0.866	BPTF
ZNF238.p2	0.856	ZNF238
FOXD3.p2	0.853	FOXD3
GGACGGA	0.803
REST.p3	0.793	REST
POU3F1..4.p2	0.786	POU3F1 POU3F3 POU3F2 POU3F4
FOXN1.p2	0.733	FOXN1
AIRE.p2	0.732	AIRE
NR6A1.p2	0.659	NR6A1
TFAP2B.p2	0.604	TFAP2B
CRX.p2	0.574	CRX
AGCAGCA	0.572
CUX2.p2	0.560	CUX2
GZF1.p2	0.548	GZF1
AR.p2	0.518	AR
STAT1,3.p3	0.496	STAT1 STAT3
AUGUGCC	0.475
AHR_ARNT_ARNT2.p2	0.467	ARNT AHR ARNT2
SMAD1..7,9.p2	0.464	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
PPARG.p2	0.435	PPARG
MAFB.p2	0.430	MAFB
AGCACCA	0.427
E2F1..5.p2	0.402	E2F4 E2F5 E2F2 E2F1 E2F3
GGAGUGU	0.401
AACAGUC	0.400
RXRG_dimer.p3	0.385	NR1H2 RXRA PPARG PPARA RXRB RXRG
PBX1.p2	0.384	PBX1
GAGAUGA	0.360
PAX8.p2	0.355	PAX8
CGUACCG	0.355
MEF2{A,B,C,D}.p2	0.340	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GAGGUAG	0.320
GAUAUGU	0.289
CDC5L.p2	0.260	CDC5L
CGUGUCU	0.256
UAAUGCU	0.252
CCUUCAU	0.233
UAAGACU	0.213
MYBL2.p2	0.212	MYBL2
DBP.p2	0.200	DBP
ZFP161.p2	0.194	ZFP161
HIC1.p2	0.188	HIC1
NKX6-1,2.p2	0.188	NKX6-1 NKX6-2
T.p2	0.188	T
UGACCUA	0.166
NFIL3.p2	0.141	NFIL3
PAX5.p2	0.139	PAX5
AUGACAC	0.130
GGCAAGA	0.119
EVI1.p2	0.114	EVI1
UUGUUCG	0.114
TBX4,5.p2	0.111	TBX5 TBX4
PDX1.p2	0.091	PDX1
HLF.p2	0.086	HLF
ALX1.p2	0.080	ALX1
AGCUGCC	0.074
ACCCGUA	0.073
HMGA1,2.p2	0.070	HMGA1 HMGA2
UCAAGUA	0.055
AGGUAGU	0.054
ARID5B.p2	0.039	ARID5B
AACCGUU	0.037
RREB1.p2	0.036	RREB1
PAX3,7.p2	0.016	PAX7 PAX3
NKX2-3_NKX2-5.p2	-0.019	NKX2-5 NKX2-3
AACCUGG	-0.025
GCUACAU	-0.025
MYFfamily.p2	-0.031	MYOD1 MYF6 MYF5 MYOG
TFCP2.p2	-0.054	TFCP2
FEV.p2	-0.069	FEV
GAUUGUC	-0.082
PAX6.p2	-0.086	PAX6
AAUCUCA	-0.089
UGCAUAG	-0.095
AAGUGCU	-0.099
UAAGACG	-0.101
AACGGAA	-0.115
FOXP3.p2	-0.119	FOXP3
UGUGCGU	-0.131
ACUGCAU	-0.131
NKX3-1.p2	-0.136	NKX3-1
ACAUUCA	-0.149
VSX1,2.p2	-0.150	VSX2 VSX1
AGUGCAA	-0.165
JUN.p2	-0.171	JUN JUND JUNB
UCACAUU	-0.194
GGAAGAC	-0.218
GAUCAGA	-0.231
AAUCUCU	-0.247
STAT5{A,B}.p2	-0.251	STAT5B STAT5A
CAGUGCA	-0.254
GUAAACA	-0.271
RXR{A,B,G}.p2	-0.281	RXRA RXRB RXRG
AGCAGCG	-0.304
UUGGCAC	-0.306
LHX3,4.p2	-0.308	LHX3 LHX4
AGCUUAU	-0.313
SOX5.p2	-0.335	SOX5
NFE2.p2	-0.343	NFE2
EBF1.p2	-0.353	EBF1
ZBTB6.p2	-0.359	ZBTB6
ACUGGCC	-0.364
CCAGCAU	-0.368
TLX2.p2	-0.403	TLX2
PRRX1,2.p2	-0.412	PRRX2 PRRX1
HMX1.p2	-0.430	HMX1
EP300.p2	-0.445	EP300
SREBF1,2.p2	-0.538	SREBF1 SREBF2
TCF4_dimer.p2	-0.555	TCF4
SP1.p2	-0.559	SP1
CREB1.p2	-0.578	CREB1
ZBTB16.p2	-0.594	ZBTB16
CDX1,2,4.p2	-0.602	CDX1 CDX2 CDX4
AAUGCCC	-0.623
GCAGCAU	-0.630
EOMES.p2	-0.631	EOMES
UUUUUGC	-0.655
HBP1_HMGB_SSRP1_UBTF.p2	-0.657	HMGB2 HMGB3 SSRP1 UBTF HBP1
UUGGCAA	-0.657
SRF.p3	-0.663	SRF
MSX1,2.p2	-0.680	MSX1 MSX2
HSF1,2.p2	-0.706	HSF1 HSF2
GUCAGUU	-0.707
EHF.p2	-0.724	EHF
MAZ.p2	-0.791	MAZ
UGUGCUU	-0.812
NFIX.p2	-0.818	NFIX
AAGGUGC	-0.838
CUACAGU	-0.852
FOXA2.p3	-0.852	FOXA2
NFATC1..3.p2	-0.911	NFATC3 NFATC2 NFATC1
UCCCUUU	-0.920
SNAI1..3.p2	-0.947	SNAI2 SNAI1 SNAI3
POU6F1.p2	-0.948	POU6F1
TFAP4.p2	-0.963	TFAP4
GUAGUGU	-0.998
GCUGGUG	-1.015
ELF1,2,4.p2	-1.034	ELF2 ELF1 ELF4
SOX{8,9,10}.p2	-1.039	SOX9 SOX8 SOX10
UGAAAUG	-1.041
CCAGUGU	-1.041
ACAGUAU	-1.074
FOX{I1,J2}.p2	-1.102	FOXI1 FOXJ2
UCCAGUU	-1.130
BACH2.p2	-1.146	BACH2
UCACAGU	-1.147
TAL1_TCF{3,4,12}.p2	-1.189	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NHLH1,2.p2	-1.199	NHLH1 NHLH2
HOX{A4,D4}.p2	-1.213	HOXA4 HOXD4
GAGAACU	-1.239
EGR1..3.p2	-1.246	EGR3 EGR1 EGR2
ACAGUAC	-1.260
ELK1,4_GABP{A,B1}.p3	-1.263	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
XBP1.p3	-1.309	XBP1
GUAACAG	-1.320
SOX17.p2	-1.333	SOX17
AAAGUGC	-1.343
UUGGUCC	-1.351
RFX1..5_RFXANK_RFXAP.p2	-1.353	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CUUUGGU	-1.358
SOX2.p2	-1.359	SOX2
GTF2I.p2	-1.370	GTF2I
ESR1.p2	-1.372	ESR1
ATF5_CREB3.p2	-1.385	ATF5 CREB3
AUUGCAC	-1.391
SPZ1.p2	-1.423	SPZ1
SRY.p2	-1.434	SRY
EWSR1-FLI1.p2	-1.520	FLI1 EWSR1
ZNF384.p2	-1.647	ZNF384
AGUGGUU	-1.659
STAT2,4,6.p2	-1.689	STAT2 STAT4 STAT6
IKZF2.p2	-1.798	IKZF2
PAX4.p2	-1.810	PAX4
TLX1..3_NFIC{dimer}.p2	-1.832	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
MTF1.p2	-1.905	MTF1
MZF1.p2	-1.911	MZF1
FOX{D1,D2}.p2	-1.968	FOXD2 FOXD1
AAUACUG	-2.049
NFE2L1.p2	-2.052	NFE2L1
PAX2.p2	-2.089	PAX2
KLF4.p3	-2.116	KLF4
GUGCAAA	-2.196
ZIC1..3.p2	-2.230	ZIC1 ZIC2 ZIC3
LEF1_TCF7_TCF7L1,2.p2	-2.277	TCF7 TCF7L2 LEF1 TCF7L1
AAGGCAC	-2.334
ATF2.p2	-2.391	ATF2
AACACUG	-2.417
TBP.p2	-2.430	TBP
MYB.p2	-2.569	MYB
ATF6.p2	-2.727	ATF6
FOXO1,3,4.p2	-2.753	FOXO1 FOXO4 FOXO3
FOS_FOS{B,L1}_JUN{B,D}.p2	-2.802	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
HOX{A6,A7,B6,B7}.p2	-2.829	HOXB6 HOXA7 HOXB7 HOXA6
GFI1.p2	-3.120	GFI1
GGAAUGU	-3.240
TFEB.p2	-4.589	TFEB
TEAD1.p2	-4.841	TEAD1 TEAD2 TEAD3 TEAD4
TFDP1.p2	-4.989	TFDP1

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Sample name: GNF_2_lymphomaburkittsRaji

Sorted z-values for every WM.