ISMARA results: GNF_2

Sample name: GNF_2_skin

Sorted Z-values histogram for the sample GNF_2_skin

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
UUUUUGC	9.150
CUCCCAA	9.109
SNAI1..3.p2	4.444	SNAI2 SNAI1 SNAI3
KLF12.p2	4.312	KLF12
TBP.p2	3.779	TBP
MTF1.p2	3.692	MTF1
SMAD1..7,9.p2	3.657	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
NANOG{mouse}.p2	3.100	NANOG
GLI1..3.p2	2.821	GLI1 GLI2 GLI3
TLX1..3_NFIC{dimer}.p2	2.781	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU1F1.p2	2.769	POU1F1
UCCCUUU	2.711
GATA6.p2	2.682	GATA6
NKX2-3_NKX2-5.p2	2.601	NKX2-5 NKX2-3
STAT1,3.p3	2.530	STAT1 STAT3
TLX2.p2	2.525	TLX2
AAAGUGC	2.456
FOS_FOS{B,L1}_JUN{B,D}.p2	2.428	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ETS1,2.p2	2.418	ETS2 ETS1
AGCACCA	2.400
HNF4A_NR2F1,2.p2	2.342	NR2F1 NR2F2 HNF4A
TBX4,5.p2	2.340	TBX5 TBX4
TGIF1.p2	2.339	TGIF1
RREB1.p2	2.261	RREB1
HIC1.p2	2.252	HIC1
FOX{D1,D2}.p2	2.239	FOXD2 FOXD1
HLF.p2	2.181	HLF
CACAGUG	2.150
POU5F1.p2	2.077	POU5F1
EN1,2.p2	2.000	EN1 EN2
GTF2A1,2.p2	1.983	GTF2A1 GTF2A2
GGCUCAG	1.967
CCCUGAG	1.959
AHR_ARNT_ARNT2.p2	1.946	ARNT AHR ARNT2
MYFfamily.p2	1.923	MYOD1 MYF6 MYF5 MYOG
UGAAAUG	1.887
TFCP2.p2	1.872	TFCP2
HMX1.p2	1.870	HMX1
EVI1.p2	1.862	EVI1
ALX1.p2	1.830	ALX1
LHX3,4.p2	1.827	LHX3 LHX4
NR3C1.p2	1.799	NR3C1
RXR{A,B,G}.p2	1.789	RXRA RXRB RXRG
MZF1.p2	1.773	MZF1
HNF1A.p2	1.769	HNF1A
NR1H4.p2	1.716	NR1H4
TEAD1.p2	1.716	TEAD1 TEAD2 TEAD3 TEAD4
FOSL2.p2	1.645	FOSL2
CCAGCAU	1.602
REST.p3	1.598	REST
RBPJ.p2	1.543	RBPJ
LEF1_TCF7_TCF7L1,2.p2	1.525	TCF7 TCF7L2 LEF1 TCF7L1
FOXL1.p2	1.496	FOXL1
RORA.p2	1.480	RORA
AAGUGCU	1.457
FOXP3.p2	1.429	FOXP3
NFE2L1.p2	1.404	NFE2L1
ATF6.p2	1.395	ATF6
SRY.p2	1.392	SRY
PPARG.p2	1.379	PPARG
GAGGUAG	1.376
GAGAACU	1.372
GATA1..3.p2	1.351	GATA1 GATA2 GATA3
UUGUUCG	1.320
TCF4_dimer.p2	1.317	TCF4
TAL1_TCF{3,4,12}.p2	1.228	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGUGCUU	1.226
POU5F1_SOX2{dimer}.p2	1.201	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GTF2I.p2	1.198	GTF2I
FOXA2.p3	1.190	FOXA2
GAGAUGA	1.180
TFAP4.p2	1.169	TFAP4
AAUCUCU	1.131
HMGA1,2.p2	1.121	HMGA1 HMGA2
NFATC1..3.p2	1.059	NFATC3 NFATC2 NFATC1
FOX{C1,C2}.p2	1.054	FOXC1 FOXC2
AGCUGCC	1.038
CEBPA,B_DDIT3.p2	1.016	DDIT3 CEBPA CEBPB
NKX2-1,4.p2	1.004	NKX2-1 NKX2-4
CUUUGGU	1.001
STAT5{A,B}.p2	0.987	STAT5B STAT5A
ACCCUGU	0.959
JUN.p2	0.958	JUN JUND JUNB
AAGGCAC	0.954
RXRA_VDR{dimer}.p2	0.923	VDR	$logo of RXRA_VDR{dimer}.p2$
MYOD1.p2	0.921	MYOD1
HAND1,2.p2	0.900	HAND1 HAND2
GGCAGUG	0.890
NFKB1_REL_RELA.p2	0.890	RELA REL NFKB1
ONECUT1,2.p2	0.890	ONECUT2 ONECUT1
CCAGUGU	0.881
EBF1.p2	0.875	EBF1
TFEB.p2	0.871	TFEB
POU2F1..3.p2	0.862	POU2F2 POU2F1 POU2F3
ZEB1.p2	0.860	ZEB1
NR6A1.p2	0.855	NR6A1
CGUGUCU	0.839
AGGUAGU	0.823
NANOG.p2	0.822	NANOG
MYBL2.p2	0.814	MYBL2
AIRE.p2	0.775	AIRE
CUACAGU	0.769
FEV.p2	0.758	FEV
PDX1.p2	0.743	PDX1
FOXO1,3,4.p2	0.725	FOXO1 FOXO4 FOXO3
STAT2,4,6.p2	0.710	STAT2 STAT4 STAT6
ZNF384.p2	0.707	ZNF384
HBP1_HMGB_SSRP1_UBTF.p2	0.669	HMGB2 HMGB3 SSRP1 UBTF HBP1
AUGACAC	0.667
MAZ.p2	0.661	MAZ
NFIL3.p2	0.570	NFIL3
AAUACUG	0.554
PAX8.p2	0.537	PAX8
PAX6.p2	0.522	PAX6
UAUUGCU	0.503
CDC5L.p2	0.503	CDC5L
NHLH1,2.p2	0.491	NHLH1 NHLH2
ACAUUCA	0.488
MSX1,2.p2	0.488	MSX1 MSX2
AGUGCAA	0.485
GGCAAGA	0.477
ZNF238.p2	0.468	ZNF238
FOX{I1,J2}.p2	0.441	FOXI1 FOXJ2
UGCAUAG	0.433
AAUCUCA	0.428
GAUCAGA	0.426
ACAGUAC	0.420
AUGUGCC	0.403
HOX{A5,B5}.p2	0.388	HOXB5 HOXA5
TFAP2{A,C}.p2	0.375	TFAP2C TFAP2A
HSF1,2.p2	0.370	HSF1 HSF2
ZBTB6.p2	0.368	ZBTB6
CAGCAGG	0.368
PRRX1,2.p2	0.356	PRRX2 PRRX1
PITX1..3.p2	0.353	PITX2 PITX3 PITX1
AACACUG	0.350
AGCUUAU	0.324
HOXA9_MEIS1.p2	0.296	MEIS1 HOXA9
AAUGCCC	0.238
POU6F1.p2	0.223	POU6F1
VSX1,2.p2	0.216	VSX2 VSX1
AUUGCAC	0.212
T.p2	0.197	T
NFIX.p2	0.179	NFIX
AGCAGCA	0.177
ACUGGCC	0.160
UGUGCGU	0.141
EOMES.p2	0.137	EOMES
GUAAACA	0.131
AACCUGG	0.121
ACUGCAU	0.113
IRF1,2,7.p3	0.097	IRF1 IRF2 IRF7
EP300.p2	0.085	EP300
UAAGACU	0.073
ESR1.p2	0.070	ESR1
UAAUGCU	0.060
ZBTB16.p2	0.038	ZBTB16
ADNP_IRX_SIX_ZHX.p2	-0.002	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UGACCUA	-0.024
POU3F1..4.p2	-0.024	POU3F1 POU3F3 POU3F2 POU3F4
ACCCGUA	-0.032
MEF2{A,B,C,D}.p2	-0.033	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
SPIB.p2	-0.055	SPIB
UGCAUUG	-0.073
CREB1.p2	-0.074	CREB1
GGAAGAC	-0.080
UCAAGUA	-0.083
GAUAUGU	-0.090
SRF.p3	-0.121	SRF
GGACGGA	-0.132
IKZF2.p2	-0.150	IKZF2
PAX2.p2	-0.181	PAX2
IKZF1.p2	-0.194	IKZF1
UUGGCAA	-0.213
CCUUCAU	-0.215
PAX3,7.p2	-0.218	PAX7 PAX3
CUX2.p2	-0.250	CUX2
AUGGCUU	-0.265
CGUACCG	-0.265
EGR1..3.p2	-0.269	EGR3 EGR1 EGR2
GAUUGUC	-0.290
DBP.p2	-0.292	DBP
AACGGAA	-0.292
AGCAGCG	-0.294
EWSR1-FLI1.p2	-0.326	FLI1 EWSR1
UUGGUCC	-0.355
GUCAGUU	-0.371
RFX1..5_RFXANK_RFXAP.p2	-0.387	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AACCGUU	-0.388
GCAGCAU	-0.403
HOX{A4,D4}.p2	-0.416	HOXA4 HOXD4
PATZ1.p2	-0.418	PATZ1
NR4A2.p2	-0.444	NR4A2
UCACAGU	-0.451
FOX{F1,F2,J1}.p2	-0.454	FOXF2 FOXJ1 FOXF1
SOX5.p2	-0.459	SOX5
CAGUGCA	-0.463
GZF1.p2	-0.497	GZF1
AUGGCAC	-0.508
ATF2.p2	-0.512	ATF2
AR.p2	-0.515	AR
UUGGCAC	-0.551
GUAGUGU	-0.571
FOXD3.p2	-0.649	FOXD3
GCUGGUG	-0.677
GCUACAU	-0.690
SREBF1,2.p2	-0.690	SREBF1 SREBF2
NKX3-1.p2	-0.700	NKX3-1
FOXQ1.p2	-0.703	FOXQ1
CDX1,2,4.p2	-0.720	CDX1 CDX2 CDX4
GUAACAG	-0.726
ZIC1..3.p2	-0.738	ZIC1 ZIC2 ZIC3
GGAGUGU	-0.742
ZNF148.p2	-0.753	ZNF148
ACAGUAU	-0.778
ZNF423.p2	-0.790	ZNF423
GFI1B.p2	-0.832	GFI1B
SPZ1.p2	-0.844	SPZ1
CRX.p2	-0.877	CRX
PRDM1.p3	-0.890	PRDM1
GUGCAAA	-0.894
RUNX1..3.p2	-0.906	RUNX1 RUNX3 RUNX2
NR5A1,2.p2	-0.914	NR5A1 NR5A2
AAGGUGC	-0.950
DMAP1_NCOR{1,2}_SMARC.p2	-0.980	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
SOX{8,9,10}.p2	-1.031	SOX9 SOX8 SOX10
NKX6-1,2.p2	-1.045	NKX6-1 NKX6-2
AGUGGUU	-1.052
UAAGACG	-1.089
NFE2.p2	-1.177	NFE2
PBX1.p2	-1.198	PBX1
TP53.p2	-1.328	TP53
PAX5.p2	-1.397	PAX5
KLF4.p3	-1.407	KLF4
GFI1.p2	-1.433	GFI1
UCCAGUU	-1.455
FOXN1.p2	-1.597	FOXN1
SPI1.p2	-1.639	SPI1
HOX{A6,A7,B6,B7}.p2	-1.658	HOXB6 HOXA7 HOXB7 HOXA6
ARID5B.p2	-1.723	ARID5B
UCACAUU	-1.741
SOX2.p2	-1.763	SOX2
ZFP161.p2	-1.815	ZFP161
CTCF.p2	-1.828	CTCF
SOX17.p2	-1.890	SOX17
RXRG_dimer.p3	-1.920	NR1H2 RXRA PPARG PPARA RXRB RXRG
AACAGUC	-1.929
NKX3-2.p2	-1.973	NKX3-2
TFDP1.p2	-2.036	TFDP1
bHLH_family.p2	-2.063	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
LMO2.p2	-2.070	LMO2
PAX4.p2	-2.134	PAX4
MAFB.p2	-2.301	MAFB
SP1.p2	-2.331	SP1
EHF.p2	-2.369	EHF
NKX2-2,8.p2	-2.533	NKX2-2 NKX2-8
BACH2.p2	-2.573	BACH2
HES1.p2	-2.748	HES1
TFAP2B.p2	-3.293	TFAP2B
ATF4.p2	-3.358	ATF4
HIF1A.p2	-3.409	HIF1A
ATF5_CREB3.p2	-3.489	ATF5 CREB3
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.572	ARNT MAX MYC USF1 BHLHB2 ARNT2
BPTF.p2	-3.581	BPTF
NFE2L2.p2	-3.847	NFE2L2
E2F1..5.p2	-4.778	E2F4 E2F5 E2F2 E2F1 E2F3
ELF1,2,4.p2	-4.954	ELF2 ELF1 ELF4
XBP1.p3	-5.019	XBP1
NFY{A,B,C}.p2	-5.257	NFYC NFYB NFYA
GGAAUGU	-5.585
MYB.p2	-5.609	MYB
ESRRA.p2	-6.501	ESRRA
ZNF143.p2	-7.498	ZNF143
ELK1,4_GABP{A,B1}.p3	-7.832	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
YY1.p2	-9.953	YY1
NRF1.p2	-10.666	NRF1

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Sample name: GNF_2_skin

Sorted z-values for every WM.