ISMARA results: GNF_2

Sample name: GNF_2_spinalcord

Sorted Z-values histogram for the sample GNF_2_spinalcord

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
HIC1.p2	5.702	HIC1
TLX1..3_NFIC{dimer}.p2	5.320	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
RFX1..5_RFXANK_RFXAP.p2	4.375	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
TGIF1.p2	4.288	TGIF1
TBP.p2	3.898	TBP
KLF12.p2	3.820	KLF12
ZIC1..3.p2	3.409	ZIC1 ZIC2 ZIC3
RREB1.p2	3.338	RREB1
NHLH1,2.p2	3.281	NHLH1 NHLH2
STAT2,4,6.p2	3.162	STAT2 STAT4 STAT6
TFCP2.p2	3.122	TFCP2
MTF1.p2	3.049	MTF1
MYOD1.p2	2.925	MYOD1
ATF2.p2	2.839	ATF2
NFIX.p2	2.790	NFIX
TFEB.p2	2.761	TFEB
MEF2{A,B,C,D}.p2	2.720	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
REST.p3	2.682	REST
JUN.p2	2.601	JUN JUND JUNB
SMAD1..7,9.p2	2.532	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AAGGCAC	2.506
CAGCAGG	2.482
ZNF384.p2	2.477	ZNF384
EVI1.p2	2.433	EVI1
GGCAGUG	2.416
LMO2.p2	2.406	LMO2
HAND1,2.p2	2.336	HAND1 HAND2
GATA1..3.p2	2.242	GATA1 GATA2 GATA3
GTF2A1,2.p2	2.207	GTF2A1 GTF2A2
ZFP161.p2	2.149	ZFP161
NFATC1..3.p2	2.084	NFATC3 NFATC2 NFATC1
AGUGCAA	2.022
GUCAGUU	2.004
HNF4A_NR2F1,2.p2	1.996	NR2F1 NR2F2 HNF4A
PAX4.p2	1.911	PAX4
SOX2.p2	1.908	SOX2
SRY.p2	1.895	SRY
NR3C1.p2	1.876	NR3C1
HSF1,2.p2	1.845	HSF1 HSF2
CACAGUG	1.831
AGCAGCA	1.783
EN1,2.p2	1.680	EN1 EN2
TEAD1.p2	1.676	TEAD1 TEAD2 TEAD3 TEAD4
CCAGCAU	1.670
SP1.p2	1.653	SP1
FOX{I1,J2}.p2	1.650	FOXI1 FOXJ2
UUGGCAC	1.647
ZBTB6.p2	1.647	ZBTB6
GGCUCAG	1.642
TAL1_TCF{3,4,12}.p2	1.636	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CTCF.p2	1.628	CTCF
UAAGACG	1.613
TCF4_dimer.p2	1.611	TCF4
MZF1.p2	1.562	MZF1
UGCAUAG	1.560
AAUACUG	1.558
MAFB.p2	1.552	MAFB
HBP1_HMGB_SSRP1_UBTF.p2	1.545	HMGB2 HMGB3 SSRP1 UBTF HBP1
UAAGACU	1.528
NFIL3.p2	1.518	NFIL3
MYFfamily.p2	1.499	MYOD1 MYF6 MYF5 MYOG
SPZ1.p2	1.478	SPZ1
AUUGCAC	1.457
POU5F1.p2	1.447	POU5F1
FOXO1,3,4.p2	1.421	FOXO1 FOXO4 FOXO3
NKX3-2.p2	1.415	NKX3-2
FEV.p2	1.383	FEV
AUGGCUU	1.383
EOMES.p2	1.376	EOMES
FOS_FOS{B,L1}_JUN{B,D}.p2	1.334	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NANOG{mouse}.p2	1.299	NANOG
FOXP3.p2	1.253	FOXP3
SOX{8,9,10}.p2	1.230	SOX9 SOX8 SOX10
GAGAACU	1.228
ESR1.p2	1.221	ESR1
GTF2I.p2	1.218	GTF2I
EBF1.p2	1.203	EBF1
POU5F1_SOX2{dimer}.p2	1.163	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
PAX6.p2	1.141	PAX6
UCCCUUU	1.135
EWSR1-FLI1.p2	1.124	FLI1 EWSR1
TBX4,5.p2	1.118	TBX5 TBX4
AAAGUGC	1.080
GUGCAAA	1.038
NKX2-3_NKX2-5.p2	1.034	NKX2-5 NKX2-3
UGUGCUU	1.017
ESRRA.p2	1.010	ESRRA
SNAI1..3.p2	0.971	SNAI2 SNAI1 SNAI3
HOX{A5,B5}.p2	0.966	HOXB5 HOXA5
AR.p2	0.924	AR
NR6A1.p2	0.918	NR6A1
RUNX1..3.p2	0.917	RUNX1 RUNX3 RUNX2
MSX1,2.p2	0.902	MSX1 MSX2
UUGGUCC	0.862
T.p2	0.855	T
HMGA1,2.p2	0.825	HMGA1 HMGA2
GGCAAGA	0.824
FOX{F1,F2,J1}.p2	0.794	FOXF2 FOXJ1 FOXF1
PRRX1,2.p2	0.793	PRRX2 PRRX1
PAX2.p2	0.781	PAX2
STAT1,3.p3	0.754	STAT1 STAT3
MAZ.p2	0.745	MAZ
FOX{D1,D2}.p2	0.741	FOXD2 FOXD1
DBP.p2	0.725	DBP
RXR{A,B,G}.p2	0.718	RXRA RXRB RXRG
NKX6-1,2.p2	0.716	NKX6-1 NKX6-2
FOSL2.p2	0.713	FOSL2
NKX3-1.p2	0.695	NKX3-1
CCAGUGU	0.691
CGUGUCU	0.683
POU6F1.p2	0.675	POU6F1
RXRA_VDR{dimer}.p2	0.672	VDR	$logo of RXRA_VDR{dimer}.p2$
HOX{A6,A7,B6,B7}.p2	0.660	HOXB6 HOXA7 HOXB7 HOXA6
AAGUGCU	0.650
NR4A2.p2	0.636	NR4A2
ETS1,2.p2	0.620	ETS2 ETS1
CEBPA,B_DDIT3.p2	0.619	DDIT3 CEBPA CEBPB
GAUCAGA	0.616
SREBF1,2.p2	0.614	SREBF1 SREBF2
UGCAUUG	0.556
ARID5B.p2	0.556	ARID5B
MYBL2.p2	0.548	MYBL2
HOXA9_MEIS1.p2	0.541	MEIS1 HOXA9
AGCUGCC	0.540
POU3F1..4.p2	0.522	POU3F1 POU3F3 POU3F2 POU3F4
GGAAGAC	0.488
CDX1,2,4.p2	0.465	CDX1 CDX2 CDX4
ALX1.p2	0.450	ALX1
NR5A1,2.p2	0.425	NR5A1 NR5A2
CUX2.p2	0.396	CUX2
CDC5L.p2	0.396	CDC5L
CUCCCAA	0.380
SRF.p3	0.373	SRF
LEF1_TCF7_TCF7L1,2.p2	0.353	TCF7 TCF7L2 LEF1 TCF7L1
AGCACCA	0.336
PATZ1.p2	0.312	PATZ1
GFI1B.p2	0.309	GFI1B
GFI1.p2	0.259	GFI1
AUGACAC	0.249
ATF4.p2	0.237	ATF4
NKX2-1,4.p2	0.227	NKX2-1 NKX2-4
GCUACAU	0.206
ZNF238.p2	0.193	ZNF238
AAGGUGC	0.185
CAGUGCA	0.184
UGUGCGU	0.184
GLI1..3.p2	0.150	GLI1 GLI2 GLI3
GZF1.p2	0.109	GZF1
PAX3,7.p2	0.108	PAX7 PAX3
PAX8.p2	0.103	PAX8
GAGAUGA	0.099
HMX1.p2	0.083	HMX1
GCUGGUG	0.045
GGACGGA	-0.002
AGUGGUU	-0.009
CUACAGU	-0.035
GUAGUGU	-0.040
FOX{C1,C2}.p2	-0.047	FOXC1 FOXC2
CRX.p2	-0.058	CRX
TFAP2{A,C}.p2	-0.058	TFAP2C TFAP2A
UGACCUA	-0.067
ACCCGUA	-0.071
AAUCUCU	-0.097
IKZF2.p2	-0.130	IKZF2
UAAUGCU	-0.134
AACGGAA	-0.135
STAT5{A,B}.p2	-0.139	STAT5B STAT5A
UCACAGU	-0.155
ONECUT1,2.p2	-0.176	ONECUT2 ONECUT1
LHX3,4.p2	-0.200	LHX3 LHX4
CCCUGAG	-0.204
TLX2.p2	-0.205	TLX2
PDX1.p2	-0.212	PDX1
HLF.p2	-0.215	HLF
PBX1.p2	-0.217	PBX1
AACACUG	-0.220
CCUUCAU	-0.246
NR1H4.p2	-0.272	NR1H4
IKZF1.p2	-0.276	IKZF1
CGUACCG	-0.279
AACCGUU	-0.289
AACAGUC	-0.295
VSX1,2.p2	-0.296	VSX2 VSX1
RORA.p2	-0.300	RORA
FOXQ1.p2	-0.313	FOXQ1
AAUCUCA	-0.346
ACAUUCA	-0.381
GUAACAG	-0.385
AUGGCAC	-0.424
KLF4.p3	-0.425	KLF4
AGCAGCG	-0.452
AACCUGG	-0.463
UAUUGCU	-0.469
GGAGUGU	-0.475
NKX2-2,8.p2	-0.479	NKX2-2 NKX2-8
ZNF423.p2	-0.491	ZNF423
ACUGCAU	-0.498
DMAP1_NCOR{1,2}_SMARC.p2	-0.513	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
NANOG.p2	-0.541	NANOG
UCCAGUU	-0.547
FOXL1.p2	-0.547	FOXL1
ACUGGCC	-0.562
UUGUUCG	-0.587
AIRE.p2	-0.591	AIRE
UCAAGUA	-0.615
ACCCUGU	-0.658
TP53.p2	-0.695	TP53
EGR1..3.p2	-0.733	EGR3 EGR1 EGR2
BACH2.p2	-0.757	BACH2
PRDM1.p3	-0.762	PRDM1
FOXN1.p2	-0.807	FOXN1
HES1.p2	-0.830	HES1
RXRG_dimer.p3	-0.860	NR1H2 RXRA PPARG PPARA RXRB RXRG
AAUGCCC	-0.878
GUAAACA	-0.929
POU1F1.p2	-0.951	POU1F1
AGGUAGU	-0.953
NFE2L2.p2	-1.043	NFE2L2
ATF6.p2	-1.086	ATF6
GAUAUGU	-1.096
ZNF148.p2	-1.129	ZNF148
AGCUUAU	-1.138
UCACAUU	-1.140
GAGGUAG	-1.192
FOXA2.p3	-1.203	FOXA2
NFE2.p2	-1.215	NFE2
ACAGUAC	-1.216
ACAGUAU	-1.261
AUGUGCC	-1.276
HOX{A4,D4}.p2	-1.294	HOXA4 HOXD4
POU2F1..3.p2	-1.295	POU2F2 POU2F1 POU2F3
CREB1.p2	-1.321	CREB1
RBPJ.p2	-1.335	RBPJ
HIF1A.p2	-1.341	HIF1A
PAX5.p2	-1.346	PAX5
TFAP2B.p2	-1.368	TFAP2B
BPTF.p2	-1.375	BPTF
GCAGCAU	-1.431
ADNP_IRX_SIX_ZHX.p2	-1.435	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CUUUGGU	-1.485
UGAAAUG	-1.534
UUGGCAA	-1.538
HNF1A.p2	-1.550	HNF1A
UUUUUGC	-1.569
PPARG.p2	-1.659	PPARG
ZEB1.p2	-1.705	ZEB1
NFE2L1.p2	-1.746	NFE2L1
SOX17.p2	-1.785	SOX17
NFKB1_REL_RELA.p2	-1.958	RELA REL NFKB1
SPIB.p2	-2.031	SPIB
TFAP4.p2	-2.165	TFAP4
IRF1,2,7.p3	-2.203	IRF1 IRF2 IRF7
GATA6.p2	-2.247	GATA6
ZBTB16.p2	-2.257	ZBTB16
GGAAUGU	-2.333
XBP1.p3	-2.369	XBP1
bHLH_family.p2	-2.378	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SOX5.p2	-2.536	SOX5
EP300.p2	-2.540	EP300
FOXD3.p2	-2.731	FOXD3
PITX1..3.p2	-2.735	PITX2 PITX3 PITX1
SPI1.p2	-2.964	SPI1
GAUUGUC	-3.303
EHF.p2	-3.337	EHF
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.423	ARNT MAX MYC USF1 BHLHB2 ARNT2
AHR_ARNT_ARNT2.p2	-3.541	ARNT AHR ARNT2
ATF5_CREB3.p2	-3.840	ATF5 CREB3
NRF1.p2	-4.252	NRF1
ZNF143.p2	-4.398	ZNF143
ELK1,4_GABP{A,B1}.p3	-5.030	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ELF1,2,4.p2	-5.086	ELF2 ELF1 ELF4
TFDP1.p2	-5.570	TFDP1
MYB.p2	-5.887	MYB
NFY{A,B,C}.p2	-6.045	NFYC NFYB NFYA
E2F1..5.p2	-7.127	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	-7.356	YY1

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Sample name: GNF_2_spinalcord

Sorted z-values for every WM.