ISMARA results: NCI60_1

Sample name: NCI60_1_786-0

Sorted Z-values histogram for the sample NCI60_1_786-0

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	9.689	YY1
E2F1..5.p2	7.826	E2F4 E2F5 E2F2 E2F1 E2F3
TFDP1.p2	6.738	TFDP1
ELF1,2,4.p2	6.509	ELF2 ELF1 ELF4
NRF1.p2	6.415	NRF1
ZNF143.p2	5.861	ZNF143
bHLH_family.p2	5.585	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ELK1,4_GABP{A,B1}.p3	5.467	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	4.838	MYB
XBP1.p3	4.617	XBP1
GGAAUGU	4.602
NFY{A,B,C}.p2	4.584	NFYC NFYB NFYA
EHF.p2	4.423	EHF
HIF1A.p2	3.977	HIF1A
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.976	ARNT MAX MYC USF1 BHLHB2 ARNT2
KLF4.p3	3.910	KLF4
TFAP2B.p2	3.766	TFAP2B
PAX5.p2	3.581	PAX5
ATF5_CREB3.p2	3.421	ATF5 CREB3
NFKB1_REL_RELA.p2	3.071	RELA REL NFKB1
UCCAGUU	2.992
ESRRA.p2	2.927	ESRRA
FOXD3.p2	2.775	FOXD3
BACH2.p2	2.685	BACH2
GCAGCAU	2.551
HOX{A6,A7,B6,B7}.p2	2.529	HOXB6 HOXA7 HOXB7 HOXA6
AAGGCAC	2.511
CREB1.p2	2.429	CREB1
UCACAUU	2.398
BPTF.p2	2.218	BPTF
GUGCAAA	2.160
SOX17.p2	2.062	SOX17
SPI1.p2	2.032	SPI1
ATF4.p2	2.022	ATF4
UCAAGUA	1.906
AGUGGUU	1.901
NFE2.p2	1.886	NFE2
NKX2-2,8.p2	1.701	NKX2-2 NKX2-8
FOXN1.p2	1.678	FOXN1
ZNF148.p2	1.489	ZNF148
ACAGUAU	1.414
AHR_ARNT_ARNT2.p2	1.379	ARNT AHR ARNT2
EP300.p2	1.371	EP300
SOX{8,9,10}.p2	1.349	SOX9 SOX8 SOX10
GUAGUGU	1.242
NFE2L2.p2	1.194	NFE2L2
UCACAGU	1.165
GFI1.p2	1.109	GFI1
GUAACAG	1.093
NKX3-1.p2	1.052	NKX3-1
ZBTB6.p2	1.049	ZBTB6
NKX6-1,2.p2	0.991	NKX6-1 NKX6-2
AACCUGG	0.982
SRF.p3	0.946	SRF
AAUGCCC	0.938
NFATC1..3.p2	0.938	NFATC3 NFATC2 NFATC1
MSX1,2.p2	0.897	MSX1 MSX2
FOS_FOS{B,L1}_JUN{B,D}.p2	0.798	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AUUGCAC	0.797
IKZF1.p2	0.781	IKZF1
NFE2L1.p2	0.778	NFE2L1
AACGGAA	0.746
UUGGCAA	0.737
RBPJ.p2	0.733	RBPJ
PBX1.p2	0.729	PBX1
UGCAUUG	0.713
PRDM1.p3	0.677	PRDM1
UAAUGCU	0.665
CCAGUGU	0.629
SOX2.p2	0.624	SOX2
ZBTB16.p2	0.615	ZBTB16
FOXQ1.p2	0.600	FOXQ1
SP1.p2	0.581	SP1
PRRX1,2.p2	0.548	PRRX2 PRRX1
CRX.p2	0.535	CRX
HSF1,2.p2	0.510	HSF1 HSF2
CCUUCAU	0.493
ACAGUAC	0.481
DMAP1_NCOR{1,2}_SMARC.p2	0.470	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CUACAGU	0.448
AGGUAGU	0.437
UGAAAUG	0.395
UUGGUCC	0.389
UGACCUA	0.382
POU3F1..4.p2	0.381	POU3F1 POU3F3 POU3F2 POU3F4
NKX3-2.p2	0.372	NKX3-2
GAUAUGU	0.371
RXRG_dimer.p3	0.360	NR1H2 RXRA PPARG PPARA RXRB RXRG
GUCAGUU	0.355
ACUGCAU	0.338
ARID5B.p2	0.332	ARID5B
EWSR1-FLI1.p2	0.304	FLI1 EWSR1
AACCGUU	0.296
LHX3,4.p2	0.292	LHX3 LHX4
AACACUG	0.290
CGUACCG	0.289
CAGUGCA	0.285
CUUUGGU	0.256
GFI1B.p2	0.254	GFI1B
AUGGCAC	0.234
TP53.p2	0.228	TP53
AGCACCA	0.157
UUGUUCG	0.128
PDX1.p2	0.112	PDX1
AUGACAC	0.110
T.p2	0.106	T
GGAGUGU	0.078
ZNF238.p2	0.068	ZNF238
CUX2.p2	0.025	CUX2
GAGAACU	0.023
ACCCGUA	0.020
GCUACAU	0.008
AAUCUCA	-0.016
TFAP4.p2	-0.016	TFAP4
VSX1,2.p2	-0.047	VSX2 VSX1
ACCCUGU	-0.065
ZEB1.p2	-0.065	ZEB1
NR6A1.p2	-0.080	NR6A1
GUAAACA	-0.083
GZF1.p2	-0.126	GZF1
AAUACUG	-0.131
HOX{A4,D4}.p2	-0.132	HOXA4 HOXD4
UUGGCAC	-0.142
CDX1,2,4.p2	-0.155	CDX1 CDX2 CDX4
AGCUGCC	-0.161
HOXA9_MEIS1.p2	-0.163	MEIS1 HOXA9
PAX3,7.p2	-0.170	PAX7 PAX3
ADNP_IRX_SIX_ZHX.p2	-0.176	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
HES1.p2	-0.203	HES1
IKZF2.p2	-0.211	IKZF2
AACAGUC	-0.237
CEBPA,B_DDIT3.p2	-0.244	DDIT3 CEBPA CEBPB
GGACGGA	-0.265
ZNF384.p2	-0.306	ZNF384
UGCAUAG	-0.309
PITX1..3.p2	-0.313	PITX2 PITX3 PITX1
AUGUGCC	-0.329
AAUCUCU	-0.329
MYBL2.p2	-0.345	MYBL2
PAX8.p2	-0.355	PAX8
ACUGGCC	-0.376
ESR1.p2	-0.390	ESR1
GGCAAGA	-0.470
UAAGACU	-0.477
FOX{C1,C2}.p2	-0.493	FOXC1 FOXC2
SOX5.p2	-0.496	SOX5
UGUGCGU	-0.496
PAX6.p2	-0.509	PAX6
HLF.p2	-0.517	HLF
HMX1.p2	-0.533	HMX1
CTCF.p2	-0.549	CTCF
RXR{A,B,G}.p2	-0.563	RXRA RXRB RXRG
UAAGACG	-0.590
STAT2,4,6.p2	-0.608	STAT2 STAT4 STAT6
NR4A2.p2	-0.672	NR4A2
AGCAGCG	-0.680
STAT5{A,B}.p2	-0.680	STAT5B STAT5A
IRF1,2,7.p3	-0.686	IRF1 IRF2 IRF7
TEAD1.p2	-0.697	TEAD1 TEAD2 TEAD3 TEAD4
GAUUGUC	-0.783
HNF1A.p2	-0.801	HNF1A
NFIX.p2	-0.841	NFIX
CCAGCAU	-0.890
AGCUUAU	-0.893
AIRE.p2	-0.897	AIRE
AAGGUGC	-0.919
TLX2.p2	-0.928	TLX2
GGAAGAC	-0.944
TFEB.p2	-0.945	TFEB
AAAGUGC	-0.971
LEF1_TCF7_TCF7L1,2.p2	-1.016	TCF7 TCF7L2 LEF1 TCF7L1
PAX4.p2	-1.020	PAX4
FOXA2.p3	-1.051	FOXA2
NKX2-3_NKX2-5.p2	-1.101	NKX2-5 NKX2-3
EBF1.p2	-1.101	EBF1
HMGA1,2.p2	-1.116	HMGA1 HMGA2
DBP.p2	-1.136	DBP
CGUGUCU	-1.147
ATF2.p2	-1.147	ATF2
TFAP2{A,C}.p2	-1.177	TFAP2C TFAP2A
FOXL1.p2	-1.190	FOXL1
GCUGGUG	-1.193
ONECUT1,2.p2	-1.205	ONECUT2 ONECUT1
TAL1_TCF{3,4,12}.p2	-1.221	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
POU5F1_SOX2{dimer}.p2	-1.245	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
RORA.p2	-1.246	RORA
ZFP161.p2	-1.255	ZFP161
AGUGCAA	-1.333
LMO2.p2	-1.345	LMO2
ACAUUCA	-1.383
GAGAUGA	-1.391
FOXO1,3,4.p2	-1.398	FOXO1 FOXO4 FOXO3
NR5A1,2.p2	-1.433	NR5A1 NR5A2
UCCCUUU	-1.434
FOX{F1,F2,J1}.p2	-1.435	FOXF2 FOXJ1 FOXF1
GAUCAGA	-1.444
NKX2-1,4.p2	-1.446	NKX2-1 NKX2-4
GGCAGUG	-1.470
STAT1,3.p3	-1.480	STAT1 STAT3
AGCAGCA	-1.490
MZF1.p2	-1.558	MZF1
UUUUUGC	-1.570
SRY.p2	-1.579	SRY
AR.p2	-1.601	AR
NANOG.p2	-1.657	NANOG
GLI1..3.p2	-1.702	GLI1 GLI2 GLI3
NHLH1,2.p2	-1.703	NHLH1 NHLH2
AAGUGCU	-1.716
POU6F1.p2	-1.716	POU6F1
SPZ1.p2	-1.745	SPZ1
PPARG.p2	-1.782	PPARG
UGUGCUU	-1.815
ALX1.p2	-1.820	ALX1
FOSL2.p2	-1.842	FOSL2
CACAGUG	-1.876
MAFB.p2	-1.893	MAFB
AUGGCUU	-1.905
SPIB.p2	-1.931	SPIB
NFIL3.p2	-1.954	NFIL3
EOMES.p2	-2.045	EOMES
FOX{I1,J2}.p2	-2.057	FOXI1 FOXJ2
PATZ1.p2	-2.122	PATZ1
TLX1..3_NFIC{dimer}.p2	-2.165	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HBP1_HMGB_SSRP1_UBTF.p2	-2.215	HMGB2 HMGB3 SSRP1 UBTF HBP1
FEV.p2	-2.250	FEV
EGR1..3.p2	-2.259	EGR3 EGR1 EGR2
NR3C1.p2	-2.267	NR3C1
UAUUGCU	-2.275
ATF6.p2	-2.302	ATF6
RXRA_VDR{dimer}.p2	-2.356	VDR	$logo of RXRA_VDR{dimer}.p2$
CDC5L.p2	-2.361	CDC5L
CAGCAGG	-2.363
JUN.p2	-2.400	JUN JUND JUNB
MTF1.p2	-2.416	MTF1
SREBF1,2.p2	-2.461	SREBF1 SREBF2
ZIC1..3.p2	-2.510	ZIC1 ZIC2 ZIC3
GTF2I.p2	-2.524	GTF2I
GATA6.p2	-2.534	GATA6
FOXP3.p2	-2.541	FOXP3
CCCUGAG	-2.542
EN1,2.p2	-2.572	EN1 EN2
POU1F1.p2	-2.702	POU1F1
RUNX1..3.p2	-2.756	RUNX1 RUNX3 RUNX2
HOX{A5,B5}.p2	-2.782	HOXB5 HOXA5
TCF4_dimer.p2	-2.829	TCF4
RFX1..5_RFXANK_RFXAP.p2	-2.845	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MAZ.p2	-2.859	MAZ
TBP.p2	-3.034	TBP
ZNF423.p2	-3.034	ZNF423
NR1H4.p2	-3.120	NR1H4
REST.p3	-3.150	REST
PAX2.p2	-3.200	PAX2
TBX4,5.p2	-3.286	TBX5 TBX4
GTF2A1,2.p2	-3.302	GTF2A1 GTF2A2
NANOG{mouse}.p2	-3.355	NANOG
ETS1,2.p2	-3.361	ETS2 ETS1
HNF4A_NR2F1,2.p2	-3.389	NR2F1 NR2F2 HNF4A
FOX{D1,D2}.p2	-3.424	FOXD2 FOXD1
TFCP2.p2	-3.452	TFCP2
MYFfamily.p2	-3.687	MYOD1 MYF6 MYF5 MYOG
GGCUCAG	-3.714
GATA1..3.p2	-3.856	GATA1 GATA2 GATA3
EVI1.p2	-3.866	EVI1
HAND1,2.p2	-3.891	HAND1 HAND2
GAGGUAG	-3.926
SMAD1..7,9.p2	-3.937	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
RREB1.p2	-4.103	RREB1
MYOD1.p2	-4.140	MYOD1
MEF2{A,B,C,D}.p2	-4.206	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
POU5F1.p2	-4.288	POU5F1
CUCCCAA	-4.501
POU2F1..3.p2	-4.544	POU2F2 POU2F1 POU2F3
TGIF1.p2	-4.572	TGIF1
HIC1.p2	-4.695	HIC1
SNAI1..3.p2	-4.719	SNAI2 SNAI1 SNAI3
KLF12.p2	-5.978	KLF12

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Sample name: NCI60_1_786-0

Sorted z-values for every WM.