ISMARA results: NCI60_1_A549

Sample name: NCI60_1_A549_ATCC

Sorted Z-values histogram for the sample NCI60_1_A549_ATCC

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
E2F1..5.p2	9.268	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	8.152	YY1
NRF1.p2	7.003	NRF1
NFY{A,B,C}.p2	6.721	NFYC NFYB NFYA
bHLH_family.p2	6.239	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ELF1,2,4.p2	6.110	ELF2 ELF1 ELF4
ELK1,4_GABP{A,B1}.p3	5.691	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ZNF143.p2	5.450	ZNF143
TFDP1.p2	5.342	TFDP1
MYB.p2	4.527	MYB
EHF.p2	4.516	EHF
NFE2L2.p2	4.005	NFE2L2
FOXD3.p2	3.886	FOXD3
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.272	ARNT MAX MYC USF1 BHLHB2 ARNT2
UCCAGUU	3.149
BPTF.p2	3.129	BPTF
PAX5.p2	3.028	PAX5
HIF1A.p2	2.965	HIF1A
GGAAUGU	2.921
UCAAGUA	2.705
ATF5_CREB3.p2	2.685	ATF5 CREB3
TP53.p2	2.353	TP53
ADNP_IRX_SIX_ZHX.p2	2.215	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
BACH2.p2	1.920	BACH2
ATF4.p2	1.908	ATF4
SP1.p2	1.903	SP1
FOXN1.p2	1.715	FOXN1
NKX3-1.p2	1.681	NKX3-1
ACAGUAU	1.641
CCAGUGU	1.634
NKX2-2,8.p2	1.623	NKX2-2 NKX2-8
HES1.p2	1.612	HES1
XBP1.p3	1.569	XBP1
ZNF148.p2	1.516	ZNF148
NR4A2.p2	1.436	NR4A2
ESRRA.p2	1.427	ESRRA
GUAACAG	1.426
NFE2.p2	1.263	NFE2
SOX17.p2	1.225	SOX17
UCACAUU	1.211
AUGGCAC	1.150
HSF1,2.p2	1.138	HSF1 HSF2
ATF2.p2	1.129	ATF2
EP300.p2	1.097	EP300
KLF4.p3	1.085	KLF4
AAGGCAC	1.043
CUACAGU	1.041
PITX1..3.p2	1.036	PITX2 PITX3 PITX1
SOX2.p2	1.035	SOX2
PAX4.p2	1.018	PAX4
GUGCAAA	0.999
PBX1.p2	0.962	PBX1
FOXQ1.p2	0.924	FOXQ1
UGAAAUG	0.923
RXRG_dimer.p3	0.922	NR1H2 RXRA PPARG PPARA RXRB RXRG
NFE2L1.p2	0.908	NFE2L1
HNF1A.p2	0.876	HNF1A
AACCUGG	0.865
GUAGUGU	0.861
CREB1.p2	0.851	CREB1
HLF.p2	0.803	HLF
CCUUCAU	0.801
HMGA1,2.p2	0.778	HMGA1 HMGA2
AGUGGUU	0.768
PRRX1,2.p2	0.766	PRRX2 PRRX1
IKZF1.p2	0.755	IKZF1
NKX6-1,2.p2	0.749	NKX6-1 NKX6-2
MSX1,2.p2	0.741	MSX1 MSX2
T.p2	0.705	T
AHR_ARNT_ARNT2.p2	0.696	ARNT AHR ARNT2
GFI1.p2	0.695	GFI1
UGCAUUG	0.675
AUUGCAC	0.658
FOX{F1,F2,J1}.p2	0.591	FOXF2 FOXJ1 FOXF1
LMO2.p2	0.578	LMO2
CTCF.p2	0.556	CTCF
UUGGUCC	0.550
NKX3-2.p2	0.542	NKX3-2
DBP.p2	0.533	DBP
SOX5.p2	0.496	SOX5
TFAP2B.p2	0.426	TFAP2B
GCAGCAU	0.421
ACAGUAC	0.412
GGAGUGU	0.402
CAGUGCA	0.398
UUGGCAA	0.391
POU3F1..4.p2	0.373	POU3F1 POU3F3 POU3F2 POU3F4
FOS_FOS{B,L1}_JUN{B,D}.p2	0.363	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ESR1.p2	0.350	ESR1
POU6F1.p2	0.346	POU6F1
STAT5{A,B}.p2	0.317	STAT5B STAT5A
ACUGCAU	0.249
AGCAGCA	0.232
AACGGAA	0.220
ZBTB6.p2	0.191	ZBTB6
AACCGUU	0.166
CGUACCG	0.156
UCACAGU	0.155
MZF1.p2	0.149	MZF1
AAUGCCC	0.122
AAUCUCA	0.119
AUGACAC	0.118
UGACCUA	0.096
EWSR1-FLI1.p2	0.091	FLI1 EWSR1
GZF1.p2	0.088	GZF1
GAUUGUC	0.088
ACCCUGU	0.069
HOX{A6,A7,B6,B7}.p2	0.052	HOXB6 HOXA7 HOXB7 HOXA6
TBP.p2	0.049	TBP
GAUAUGU	0.030
UGUGCGU	0.010
AUGUGCC	-0.015
POU5F1_SOX2{dimer}.p2	-0.022	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GFI1B.p2	-0.048	GFI1B
ACCCGUA	-0.050
GCUACAU	-0.057
ARID5B.p2	-0.060	ARID5B
PDX1.p2	-0.062	PDX1
PAX3,7.p2	-0.078	PAX7 PAX3
AACACUG	-0.097
STAT2,4,6.p2	-0.106	STAT2 STAT4 STAT6
CEBPA,B_DDIT3.p2	-0.107	DDIT3 CEBPA CEBPB
AAGGUGC	-0.129
VSX1,2.p2	-0.141	VSX2 VSX1
AGGUAGU	-0.183
GAUCAGA	-0.187
AGCACCA	-0.190
RBPJ.p2	-0.202	RBPJ
CGUGUCU	-0.239
ZNF384.p2	-0.239	ZNF384
ACUGGCC	-0.241
GUAAACA	-0.262
GLI1..3.p2	-0.264	GLI1 GLI2 GLI3
NFATC1..3.p2	-0.298	NFATC3 NFATC2 NFATC1
PAX8.p2	-0.305	PAX8
DMAP1_NCOR{1,2}_SMARC.p2	-0.313	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CRX.p2	-0.317	CRX
GCUGGUG	-0.341
ZBTB16.p2	-0.349	ZBTB16
CUX2.p2	-0.362	CUX2
EBF1.p2	-0.373	EBF1
AGCUGCC	-0.377
ACAUUCA	-0.394
ZEB1.p2	-0.406	ZEB1
LHX3,4.p2	-0.422	LHX3 LHX4
HOX{A4,D4}.p2	-0.455	HOXA4 HOXD4
UAAUGCU	-0.466
GGCAAGA	-0.472
AAUCUCU	-0.487
MYBL2.p2	-0.505	MYBL2
SPI1.p2	-0.581	SPI1
UAAGACG	-0.624
SPIB.p2	-0.646	SPIB
GAGAACU	-0.648
GTF2I.p2	-0.663	GTF2I
CCAGCAU	-0.689
CUUUGGU	-0.695
RFX1..5_RFXANK_RFXAP.p2	-0.695	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
FOXL1.p2	-0.695	FOXL1
SOX{8,9,10}.p2	-0.704	SOX9 SOX8 SOX10
GUCAGUU	-0.707
UGUGCUU	-0.711
PPARG.p2	-0.735	PPARG
GGACGGA	-0.755
EN1,2.p2	-0.777	EN1 EN2
GTF2A1,2.p2	-0.783	GTF2A1 GTF2A2
LEF1_TCF7_TCF7L1,2.p2	-0.788	TCF7 TCF7L2 LEF1 TCF7L1
UUGGCAC	-0.812
FOX{C1,C2}.p2	-0.857	FOXC1 FOXC2
FOXO1,3,4.p2	-0.859	FOXO1 FOXO4 FOXO3
UUGUUCG	-0.872
UAAGACU	-0.882
AGUGCAA	-0.890
PAX6.p2	-0.916	PAX6
AAUACUG	-0.937
MTF1.p2	-0.960	MTF1
UAUUGCU	-0.965
CAGCAGG	-0.991
AR.p2	-1.019	AR
GAGAUGA	-1.034
AACAGUC	-1.041
NR5A1,2.p2	-1.045	NR5A1 NR5A2
MAFB.p2	-1.049	MAFB
NKX2-3_NKX2-5.p2	-1.066	NKX2-5 NKX2-3
RXRA_VDR{dimer}.p2	-1.070	VDR	$logo of RXRA_VDR{dimer}.p2$
NFIL3.p2	-1.075	NFIL3
HOX{A5,B5}.p2	-1.153	HOXB5 HOXA5
HMX1.p2	-1.162	HMX1
NR6A1.p2	-1.179	NR6A1
TAL1_TCF{3,4,12}.p2	-1.206	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CDC5L.p2	-1.241	CDC5L
AAGUGCU	-1.255
FOXA2.p3	-1.325	FOXA2
ZIC1..3.p2	-1.345	ZIC1 ZIC2 ZIC3
SRY.p2	-1.376	SRY
STAT1,3.p3	-1.378	STAT1 STAT3
SRF.p3	-1.411	SRF
PRDM1.p3	-1.413	PRDM1
PATZ1.p2	-1.449	PATZ1
TFAP4.p2	-1.471	TFAP4
CACAGUG	-1.474
NKX2-1,4.p2	-1.485	NKX2-1 NKX2-4
RORA.p2	-1.498	RORA
AGCUUAU	-1.500
AGCAGCG	-1.545
SNAI1..3.p2	-1.551	SNAI2 SNAI1 SNAI3
POU2F1..3.p2	-1.611	POU2F2 POU2F1 POU2F3
NFIX.p2	-1.630	NFIX
ZFP161.p2	-1.671	ZFP161
CDX1,2,4.p2	-1.688	CDX1 CDX2 CDX4
ONECUT1,2.p2	-1.714	ONECUT2 ONECUT1
TFAP2{A,C}.p2	-1.732	TFAP2C TFAP2A
NANOG.p2	-1.738	NANOG
EOMES.p2	-1.749	EOMES
SREBF1,2.p2	-1.761	SREBF1 SREBF2
NHLH1,2.p2	-1.775	NHLH1 NHLH2
PAX2.p2	-1.779	PAX2
GGAAGAC	-1.790
NR3C1.p2	-1.799	NR3C1
ATF6.p2	-1.842	ATF6
HOXA9_MEIS1.p2	-1.864	MEIS1 HOXA9
TBX4,5.p2	-1.903	TBX5 TBX4
ZNF423.p2	-1.905	ZNF423
RXR{A,B,G}.p2	-1.924	RXRA RXRB RXRG
AIRE.p2	-1.941	AIRE
AUGGCUU	-1.961
ETS1,2.p2	-1.977	ETS2 ETS1
UCCCUUU	-1.994
NFKB1_REL_RELA.p2	-2.018	RELA REL NFKB1
TFEB.p2	-2.088	TFEB
IRF1,2,7.p3	-2.089	IRF1 IRF2 IRF7
AAAGUGC	-2.091
GATA6.p2	-2.105	GATA6
ZNF238.p2	-2.208	ZNF238
HNF4A_NR2F1,2.p2	-2.218	NR2F1 NR2F2 HNF4A
NANOG{mouse}.p2	-2.271	NANOG
ALX1.p2	-2.294	ALX1
REST.p3	-2.298	REST
FOX{I1,J2}.p2	-2.305	FOXI1 FOXJ2
FOX{D1,D2}.p2	-2.307	FOXD2 FOXD1
HBP1_HMGB_SSRP1_UBTF.p2	-2.313	HMGB2 HMGB3 SSRP1 UBTF HBP1
TLX2.p2	-2.338	TLX2
FOSL2.p2	-2.409	FOSL2
FOXP3.p2	-2.418	FOXP3
CCCUGAG	-2.433
TEAD1.p2	-2.560	TEAD1 TEAD2 TEAD3 TEAD4
GATA1..3.p2	-2.573	GATA1 GATA2 GATA3
SPZ1.p2	-2.591	SPZ1
POU1F1.p2	-2.594	POU1F1
GAGGUAG	-2.605
HAND1,2.p2	-2.609	HAND1 HAND2
EGR1..3.p2	-2.639	EGR3 EGR1 EGR2
UGCAUAG	-2.642
UUUUUGC	-2.697
MEF2{A,B,C,D}.p2	-2.797	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
EVI1.p2	-2.814	EVI1
MYOD1.p2	-2.821	MYOD1
GGCAGUG	-2.833
JUN.p2	-2.937	JUN JUND JUNB
MAZ.p2	-3.102	MAZ
RUNX1..3.p2	-3.128	RUNX1 RUNX3 RUNX2
IKZF2.p2	-3.278	IKZF2
CUCCCAA	-3.300
FEV.p2	-3.353	FEV
HIC1.p2	-3.380	HIC1
TFCP2.p2	-3.393	TFCP2
TCF4_dimer.p2	-3.478	TCF4
RREB1.p2	-3.572	RREB1
TLX1..3_NFIC{dimer}.p2	-3.684	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NR1H4.p2	-3.703	NR1H4
GGCUCAG	-3.741
MYFfamily.p2	-3.762	MYOD1 MYF6 MYF5 MYOG
POU5F1.p2	-4.126	POU5F1
TGIF1.p2	-4.305	TGIF1
KLF12.p2	-4.632	KLF12
SMAD1..7,9.p2	-5.221	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9

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Sample name: NCI60_1_A549_ATCC

Sorted z-values for every WM.