ISMARA results: NCI60_1

Sample name: NCI60_1_CAKI-1

Sorted Z-values histogram for the sample NCI60_1_CAKI-1

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
XBP1.p3	6.608	XBP1
YY1.p2	6.096	YY1
ELF1,2,4.p2	6.014	ELF2 ELF1 ELF4
bHLH_family.p2	5.436	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NRF1.p2	5.016	NRF1
ZNF143.p2	4.623	ZNF143
NFY{A,B,C}.p2	4.611	NFYC NFYB NFYA
ATF5_CREB3.p2	4.552	ATF5 CREB3
MYB.p2	4.265	MYB
KLF4.p3	4.253	KLF4
GGAAUGU	4.211
ELK1,4_GABP{A,B1}.p3	4.080	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
TFDP1.p2	3.627	TFDP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.607	ARNT MAX MYC USF1 BHLHB2 ARNT2
FOXD3.p2	3.268	FOXD3
HIF1A.p2	3.152	HIF1A
E2F1..5.p2	2.916	E2F4 E2F5 E2F2 E2F1 E2F3
SOX17.p2	2.885	SOX17
PAX5.p2	2.747	PAX5
UCCAGUU	2.731
TFAP2B.p2	2.613	TFAP2B
BACH2.p2	2.593	BACH2
EHF.p2	2.335	EHF
TP53.p2	2.205	TP53
ZNF148.p2	2.118	ZNF148
BPTF.p2	2.055	BPTF
ACAGUAU	2.026
AGUGGUU	1.946
NFE2L2.p2	1.864	NFE2L2
SP1.p2	1.792	SP1
GUAGUGU	1.786
ESRRA.p2	1.759	ESRRA
NFE2.p2	1.738	NFE2
NKX3-1.p2	1.716	NKX3-1
UCAAGUA	1.704
AAGGCAC	1.701
ZNF384.p2	1.690	ZNF384
NFE2L1.p2	1.684	NFE2L1
SRF.p3	1.669	SRF
ADNP_IRX_SIX_ZHX.p2	1.625	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
EP300.p2	1.610	EP300
HSF1,2.p2	1.597	HSF1 HSF2
AAUACUG	1.590
SPI1.p2	1.587	SPI1
NKX2-2,8.p2	1.586	NKX2-2 NKX2-8
ATF4.p2	1.455	ATF4
PBX1.p2	1.403	PBX1
AHR_ARNT_ARNT2.p2	1.373	ARNT AHR ARNT2
ESR1.p2	1.349	ESR1
CUUUGGU	1.339
PRDM1.p3	1.338	PRDM1
CCAGUGU	1.284
AUUGCAC	1.235
NFKB1_REL_RELA.p2	1.127	RELA REL NFKB1
MSX1,2.p2	1.125	MSX1 MSX2
UCACAUU	1.072
GUGCAAA	1.004
HES1.p2	0.949	HES1
FOS_FOS{B,L1}_JUN{B,D}.p2	0.942	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
SOX2.p2	0.904	SOX2
AACGGAA	0.891
GUAACAG	0.890
AGGUAGU	0.843
FOXN1.p2	0.815	FOXN1
HOX{A6,A7,B6,B7}.p2	0.782	HOXB6 HOXA7 HOXB7 HOXA6
AAUGCCC	0.774
CGUACCG	0.771
PITX1..3.p2	0.737	PITX2 PITX3 PITX1
NKX3-2.p2	0.712	NKX3-2
ZBTB6.p2	0.703	ZBTB6
UAAUGCU	0.683
ZBTB16.p2	0.676	ZBTB16
CCUUCAU	0.672
GCAGCAU	0.666
ARID5B.p2	0.611	ARID5B
UGCAUUG	0.604
CRX.p2	0.539	CRX
HMGA1,2.p2	0.539	HMGA1 HMGA2
PRRX1,2.p2	0.538	PRRX2 PRRX1
NFATC1..3.p2	0.532	NFATC3 NFATC2 NFATC1
GAUAUGU	0.517
EWSR1-FLI1.p2	0.493	FLI1 EWSR1
TFAP2{A,C}.p2	0.468	TFAP2C TFAP2A
GGAGUGU	0.459
DMAP1_NCOR{1,2}_SMARC.p2	0.458	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
MYBL2.p2	0.454	MYBL2
IKZF1.p2	0.439	IKZF1
UCACAGU	0.421
HLF.p2	0.389	HLF
NR6A1.p2	0.381	NR6A1
HOX{A4,D4}.p2	0.370	HOXA4 HOXD4
LHX3,4.p2	0.365	LHX3 LHX4
UGAAAUG	0.348
CDC5L.p2	0.339	CDC5L
PAX4.p2	0.325	PAX4
GFI1.p2	0.319	GFI1
PATZ1.p2	0.287	PATZ1
CUACAGU	0.280
T.p2	0.277	T
ACUGCAU	0.273
CTCF.p2	0.267	CTCF
UUGGCAC	0.267
STAT2,4,6.p2	0.251	STAT2 STAT4 STAT6
PDX1.p2	0.190	PDX1
CUX2.p2	0.164	CUX2
UUGGCAA	0.128
AUGUGCC	0.117
IRF1,2,7.p3	0.105	IRF1 IRF2 IRF7
AACCUGG	0.097
RXRG_dimer.p3	0.058	NR1H2 RXRA PPARG PPARA RXRB RXRG
TEAD1.p2	0.057	TEAD1 TEAD2 TEAD3 TEAD4
FOX{F1,F2,J1}.p2	0.053	FOXF2 FOXJ1 FOXF1
AUGACAC	0.051
AAUCUCA	0.050
POU3F1..4.p2	0.049	POU3F1 POU3F3 POU3F2 POU3F4
AACCGUU	0.046
GZF1.p2	0.038	GZF1
ACCCGUA	0.036
NKX6-1,2.p2	0.035	NKX6-1 NKX6-2
GGACGGA	0.002
MZF1.p2	-0.036	MZF1
NKX2-3_NKX2-5.p2	-0.045	NKX2-5 NKX2-3
ACAGUAC	-0.053
PAX3,7.p2	-0.054	PAX7 PAX3
GUCAGUU	-0.059
AAUCUCU	-0.060
LEF1_TCF7_TCF7L1,2.p2	-0.094	TCF7 TCF7L2 LEF1 TCF7L1
ATF2.p2	-0.104	ATF2
TBP.p2	-0.109	TBP
PAX8.p2	-0.133	PAX8
UGACCUA	-0.149
AGCAGCA	-0.154
HOXA9_MEIS1.p2	-0.173	MEIS1 HOXA9
CREB1.p2	-0.199	CREB1
SOX5.p2	-0.201	SOX5
FOXQ1.p2	-0.216	FOXQ1
NFIX.p2	-0.217	NFIX
AAGGUGC	-0.221
CEBPA,B_DDIT3.p2	-0.228	DDIT3 CEBPA CEBPB
ZEB1.p2	-0.229	ZEB1
HNF1A.p2	-0.233	HNF1A
RXR{A,B,G}.p2	-0.236	RXRA RXRB RXRG
GATA1..3.p2	-0.264	GATA1 GATA2 GATA3
ACCCUGU	-0.270
UUGGUCC	-0.279
SREBF1,2.p2	-0.357	SREBF1 SREBF2
SOX{8,9,10}.p2	-0.375	SOX9 SOX8 SOX10
ZNF423.p2	-0.377	ZNF423
CGUGUCU	-0.381
HMX1.p2	-0.383	HMX1
GUAAACA	-0.390
UAAGACU	-0.391
UAAGACG	-0.402
UGUGCGU	-0.405
AGCUGCC	-0.411
GCUACAU	-0.415
AAAGUGC	-0.420
LMO2.p2	-0.445	LMO2
GFI1B.p2	-0.466	GFI1B
AACAGUC	-0.495
ACUGGCC	-0.532
TFAP4.p2	-0.533	TFAP4
NR4A2.p2	-0.542	NR4A2
AGCACCA	-0.566
AGCUUAU	-0.584
ATF6.p2	-0.598	ATF6
SPIB.p2	-0.618	SPIB
AR.p2	-0.625	AR
AGCAGCG	-0.631
FOXO1,3,4.p2	-0.637	FOXO1 FOXO4 FOXO3
AUGGCAC	-0.676
FOX{C1,C2}.p2	-0.691	FOXC1 FOXC2
CAGUGCA	-0.707
VSX1,2.p2	-0.710	VSX2 VSX1
UGCAUAG	-0.728
SRY.p2	-0.753	SRY
CDX1,2,4.p2	-0.762	CDX1 CDX2 CDX4
CCAGCAU	-0.764
RBPJ.p2	-0.766	RBPJ
POU5F1_SOX2{dimer}.p2	-0.770	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
RORA.p2	-0.805	RORA
AACACUG	-0.806
GAGAACU	-0.837
GLI1..3.p2	-0.847	GLI1 GLI2 GLI3
AGUGCAA	-0.885
PAX6.p2	-0.892	PAX6
STAT5{A,B}.p2	-0.902	STAT5B STAT5A
GAUCAGA	-0.975
GAUUGUC	-1.007
FOXA2.p3	-1.040	FOXA2
STAT1,3.p3	-1.049	STAT1 STAT3
FEV.p2	-1.051	FEV
HOX{A5,B5}.p2	-1.085	HOXB5 HOXA5
CACAGUG	-1.103
GCUGGUG	-1.105
DBP.p2	-1.114	DBP
ZNF238.p2	-1.135	ZNF238
PPARG.p2	-1.162	PPARG
SPZ1.p2	-1.173	SPZ1
GAGAUGA	-1.187
ZIC1..3.p2	-1.192	ZIC1 ZIC2 ZIC3
UUGUUCG	-1.206
TLX1..3_NFIC{dimer}.p2	-1.239	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU6F1.p2	-1.255	POU6F1
UCCCUUU	-1.263
GGCAAGA	-1.268
FOXL1.p2	-1.276	FOXL1
TAL1_TCF{3,4,12}.p2	-1.296	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NR5A1,2.p2	-1.340	NR5A1 NR5A2
NANOG.p2	-1.352	NANOG
ZFP161.p2	-1.392	ZFP161
NFIL3.p2	-1.393	NFIL3
TLX2.p2	-1.475	TLX2
MAFB.p2	-1.501	MAFB
EN1,2.p2	-1.561	EN1 EN2
ONECUT1,2.p2	-1.576	ONECUT2 ONECUT1
POU2F1..3.p2	-1.635	POU2F2 POU2F1 POU2F3
RXRA_VDR{dimer}.p2	-1.648	VDR	$logo of RXRA_VDR{dimer}.p2$
FOSL2.p2	-1.690	FOSL2
AIRE.p2	-1.717	AIRE
TFEB.p2	-1.754	TFEB
GGCUCAG	-1.804
FOX{I1,J2}.p2	-1.843	FOXI1 FOXJ2
MAZ.p2	-1.863	MAZ
GTF2I.p2	-1.877	GTF2I
GTF2A1,2.p2	-1.886	GTF2A1 GTF2A2
FOXP3.p2	-1.899	FOXP3
GGAAGAC	-1.923
AUGGCUU	-1.965
NHLH1,2.p2	-2.010	NHLH1 NHLH2
UAUUGCU	-2.040
AAGUGCU	-2.048
MYOD1.p2	-2.153	MYOD1
CAGCAGG	-2.161
NKX2-1,4.p2	-2.216	NKX2-1 NKX2-4
MYFfamily.p2	-2.281	MYOD1 MYF6 MYF5 MYOG
ETS1,2.p2	-2.352	ETS2 ETS1
GGCAGUG	-2.370
HIC1.p2	-2.371	HIC1
MEF2{A,B,C,D}.p2	-2.460	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UGUGCUU	-2.522
HBP1_HMGB_SSRP1_UBTF.p2	-2.540	HMGB2 HMGB3 SSRP1 UBTF HBP1
IKZF2.p2	-2.546	IKZF2
ACAUUCA	-2.584
EBF1.p2	-2.586	EBF1
NR3C1.p2	-2.612	NR3C1
REST.p3	-2.647	REST
NANOG{mouse}.p2	-2.661	NANOG
FOX{D1,D2}.p2	-2.664	FOXD2 FOXD1
MTF1.p2	-2.724	MTF1
NR1H4.p2	-2.760	NR1H4
GAGGUAG	-2.764
POU1F1.p2	-2.771	POU1F1
HNF4A_NR2F1,2.p2	-2.797	NR2F1 NR2F2 HNF4A
EGR1..3.p2	-2.869	EGR3 EGR1 EGR2
TCF4_dimer.p2	-2.872	TCF4
TBX4,5.p2	-2.924	TBX5 TBX4
EOMES.p2	-2.924	EOMES
PAX2.p2	-2.946	PAX2
EVI1.p2	-2.968	EVI1
JUN.p2	-3.023	JUN JUND JUNB
RFX1..5_RFXANK_RFXAP.p2	-3.156	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
UUUUUGC	-3.174
CCCUGAG	-3.249
GATA6.p2	-3.383	GATA6
HAND1,2.p2	-3.405	HAND1 HAND2
ALX1.p2	-3.565	ALX1
RREB1.p2	-3.695	RREB1
TFCP2.p2	-3.792	TFCP2
RUNX1..3.p2	-3.946	RUNX1 RUNX3 RUNX2
POU5F1.p2	-4.095	POU5F1
KLF12.p2	-4.315	KLF12
SNAI1..3.p2	-4.525	SNAI2 SNAI1 SNAI3
SMAD1..7,9.p2	-4.583	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TGIF1.p2	-5.613	TGIF1
CUCCCAA	-5.617

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Sample name: NCI60_1_CAKI-1

Sorted z-values for every WM.