ISMARA results: NCI60_1

Sample name: NCI60_1_COLO205

Sorted Z-values histogram for the sample NCI60_1_COLO205

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	9.434	YY1
NFY{A,B,C}.p2	8.432	NFYC NFYB NFYA
E2F1..5.p2	7.676	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	7.299	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	5.827	MYB
NRF1.p2	5.428	NRF1
EHF.p2	5.235	EHF
ELF1,2,4.p2	5.065	ELF2 ELF1 ELF4
ATF5_CREB3.p2	4.754	ATF5 CREB3
ZNF143.p2	4.112	ZNF143
SNAI1..3.p2	4.052	SNAI2 SNAI1 SNAI3
TFDP1.p2	3.725	TFDP1
GGAAUGU	3.656
XBP1.p3	3.614	XBP1
bHLH_family.p2	3.401	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
BPTF.p2	3.330	BPTF
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.107	ARNT MAX MYC USF1 BHLHB2 ARNT2
RXRG_dimer.p3	2.979	NR1H2 RXRA PPARG PPARA RXRB RXRG
HNF1A.p2	2.854	HNF1A
TP53.p2	2.851	TP53
HES1.p2	2.824	HES1
FOXN1.p2	2.765	FOXN1
PAX5.p2	2.755	PAX5
BACH2.p2	2.603	BACH2
PPARG.p2	2.564	PPARG
UCAAGUA	2.538
UCACAUU	2.304
FOXD3.p2	2.303	FOXD3
ATF4.p2	2.272	ATF4
HOX{A4,D4}.p2	2.064	HOXA4 HOXD4
ZEB1.p2	2.047	ZEB1
CUUUGGU	2.032
PBX1.p2	2.013	PBX1
AAGGCAC	2.011
SPI1.p2	1.997	SPI1
GFI1B.p2	1.976	GFI1B
IKZF1.p2	1.848	IKZF1
ADNP_IRX_SIX_ZHX.p2	1.750	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
FOS_FOS{B,L1}_JUN{B,D}.p2	1.746	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
EP300.p2	1.659	EP300
SP1.p2	1.635	SP1
ESRRA.p2	1.622	ESRRA
ZBTB16.p2	1.614	ZBTB16
HNF4A_NR2F1,2.p2	1.604	NR2F1 NR2F2 HNF4A
T.p2	1.579	T
ACAGUAC	1.531
NFE2L2.p2	1.522	NFE2L2
HIF1A.p2	1.460	HIF1A
SOX5.p2	1.418	SOX5
FOXA2.p3	1.346	FOXA2
SPZ1.p2	1.281	SPZ1
EWSR1-FLI1.p2	1.273	FLI1 EWSR1
UUGUUCG	1.238
NKX3-1.p2	1.117	NKX3-1
GGAGUGU	1.007
AGUGGUU	0.958
CCAGUGU	0.944
ATF2.p2	0.893	ATF2
GAUUGUC	0.889
HMGA1,2.p2	0.884	HMGA1 HMGA2
CCUUCAU	0.868
UUGGCAA	0.830
NKX3-2.p2	0.777	NKX3-2
UCCAGUU	0.755
AUGGCAC	0.692
AAUCUCA	0.667
AGUGCAA	0.642
ACAGUAU	0.629
NFE2L1.p2	0.616	NFE2L1
AACAGUC	0.602
PATZ1.p2	0.561	PATZ1
MAFB.p2	0.536	MAFB
AUGUGCC	0.530
NR4A2.p2	0.516	NR4A2
UAAUGCU	0.465
VSX1,2.p2	0.418	VSX2 VSX1
AGCAGCA	0.416
PRDM1.p3	0.407	PRDM1
GUAACAG	0.360
ZNF384.p2	0.351	ZNF384
SREBF1,2.p2	0.328	SREBF1 SREBF2
AACCGUU	0.319
ACUGGCC	0.315
CAGUGCA	0.302
AACCUGG	0.273
LEF1_TCF7_TCF7L1,2.p2	0.268	TCF7 TCF7L2 LEF1 TCF7L1
TFAP2B.p2	0.242	TFAP2B
POU6F1.p2	0.239	POU6F1
ACUGCAU	0.211
AGCUGCC	0.179
RBPJ.p2	0.165	RBPJ
ZNF238.p2	0.164	ZNF238
GZF1.p2	0.143	GZF1
UCACAGU	0.135
FOX{C1,C2}.p2	0.122	FOXC1 FOXC2
NKX2-2,8.p2	0.116	NKX2-2 NKX2-8
CUACAGU	0.102
ACCCGUA	0.080
GFI1.p2	0.067	GFI1
EBF1.p2	0.046	EBF1
NFIX.p2	0.019	NFIX
EOMES.p2	0.015	EOMES
EGR1..3.p2	-0.009	EGR3 EGR1 EGR2
HOX{A6,A7,B6,B7}.p2	-0.026	HOXB6 HOXA7 HOXB7 HOXA6
AGCUUAU	-0.036
CGUACCG	-0.049
GAGAACU	-0.050
AACACUG	-0.050
UGUGCUU	-0.055
ARID5B.p2	-0.060	ARID5B
GCUACAU	-0.065
ESR1.p2	-0.065	ESR1
GUAAACA	-0.066
IRF1,2,7.p3	-0.070	IRF1 IRF2 IRF7
FOXO1,3,4.p2	-0.072	FOXO1 FOXO4 FOXO3
PRRX1,2.p2	-0.085	PRRX2 PRRX1
MTF1.p2	-0.087	MTF1
AAUGCCC	-0.090
CDC5L.p2	-0.097	CDC5L
GGCAAGA	-0.102
AACGGAA	-0.104
UGUGCGU	-0.114
TBX4,5.p2	-0.131	TBX5 TBX4
STAT5{A,B}.p2	-0.162	STAT5B STAT5A
ZBTB6.p2	-0.163	ZBTB6
TAL1_TCF{3,4,12}.p2	-0.163	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGACCUA	-0.166
FOX{I1,J2}.p2	-0.170	FOXI1 FOXJ2
GAGGUAG	-0.185
FOX{F1,F2,J1}.p2	-0.197	FOXF2 FOXJ1 FOXF1
AAUCUCU	-0.211
KLF4.p3	-0.217	KLF4
GGACGGA	-0.218
SOX{8,9,10}.p2	-0.221	SOX9 SOX8 SOX10
AUGACAC	-0.234
PAX3,7.p2	-0.234	PAX7 PAX3
PAX6.p2	-0.242	PAX6
GAUAUGU	-0.246
CEBPA,B_DDIT3.p2	-0.247	DDIT3 CEBPA CEBPB
AGCAGCG	-0.248
UAAGACG	-0.300
UCCCUUU	-0.308
GAUCAGA	-0.332
UUGGUCC	-0.360
PAX8.p2	-0.371	PAX8
AAGGUGC	-0.402
PDX1.p2	-0.407	PDX1
AUUGCAC	-0.419
CGUGUCU	-0.421
NANOG{mouse}.p2	-0.429	NANOG
HOX{A5,B5}.p2	-0.430	HOXB5 HOXA5
SOX2.p2	-0.434	SOX2
PAX2.p2	-0.471	PAX2
FOXL1.p2	-0.479	FOXL1
UGCAUUG	-0.480
DMAP1_NCOR{1,2}_SMARC.p2	-0.482	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CRX.p2	-0.483	CRX
SRY.p2	-0.484	SRY
ACCCUGU	-0.495
CDX1,2,4.p2	-0.506	CDX1 CDX2 CDX4
NFE2.p2	-0.507	NFE2
NFIL3.p2	-0.524	NFIL3
NR5A1,2.p2	-0.525	NR5A1 NR5A2
ACAUUCA	-0.548
AR.p2	-0.553	AR
HLF.p2	-0.561	HLF
AGGUAGU	-0.563
GAGAUGA	-0.574
AHR_ARNT_ARNT2.p2	-0.605	ARNT AHR ARNT2
ONECUT1,2.p2	-0.627	ONECUT2 ONECUT1
SPIB.p2	-0.692	SPIB
FOXQ1.p2	-0.701	FOXQ1
MSX1,2.p2	-0.707	MSX1 MSX2
POU5F1_SOX2{dimer}.p2	-0.711	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
PAX4.p2	-0.715	PAX4
NANOG.p2	-0.719	NANOG
TFAP4.p2	-0.724	TFAP4
GUGCAAA	-0.726
AAGUGCU	-0.736
GCUGGUG	-0.739
UAAGACU	-0.755
SOX17.p2	-0.765	SOX17
NKX6-1,2.p2	-0.786	NKX6-1 NKX6-2
ZNF148.p2	-0.786	ZNF148
GCAGCAU	-0.806
HMX1.p2	-0.854	HMX1
UUGGCAC	-0.855
NR6A1.p2	-0.920	NR6A1
GUCAGUU	-0.989
ZFP161.p2	-1.001	ZFP161
RORA.p2	-1.009	RORA
TLX2.p2	-1.035	TLX2
GUAGUGU	-1.035
UGAAAUG	-1.072
POU3F1..4.p2	-1.098	POU3F1 POU3F3 POU3F2 POU3F4
HOXA9_MEIS1.p2	-1.106	MEIS1 HOXA9
CREB1.p2	-1.109	CREB1
CCCUGAG	-1.119
CACAGUG	-1.130
NKX2-1,4.p2	-1.136	NKX2-1 NKX2-4
LMO2.p2	-1.183	LMO2
GGCUCAG	-1.208
CAGCAGG	-1.227
CTCF.p2	-1.233	CTCF
AUGGCUU	-1.275
UAUUGCU	-1.282
HSF1,2.p2	-1.319	HSF1 HSF2
CCAGCAU	-1.348
NKX2-3_NKX2-5.p2	-1.362	NKX2-5 NKX2-3
TEAD1.p2	-1.366	TEAD1 TEAD2 TEAD3 TEAD4
ATF6.p2	-1.370	ATF6
CUX2.p2	-1.371	CUX2
DBP.p2	-1.419	DBP
IKZF2.p2	-1.445	IKZF2
SMAD1..7,9.p2	-1.452	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GGAAGAC	-1.525
MYBL2.p2	-1.528	MYBL2
RXRA_VDR{dimer}.p2	-1.612	VDR	$logo of RXRA_VDR{dimer}.p2$
GATA6.p2	-1.634	GATA6
POU2F1..3.p2	-1.676	POU2F2 POU2F1 POU2F3
RUNX1..3.p2	-1.722	RUNX1 RUNX3 RUNX2
NR3C1.p2	-1.742	NR3C1
NHLH1,2.p2	-1.808	NHLH1 NHLH2
EN1,2.p2	-1.847	EN1 EN2
GLI1..3.p2	-1.848	GLI1 GLI2 GLI3
AAAGUGC	-1.910
POU1F1.p2	-1.925	POU1F1
FOSL2.p2	-1.985	FOSL2
AIRE.p2	-1.991	AIRE
GTF2A1,2.p2	-2.036	GTF2A1 GTF2A2
NR1H4.p2	-2.080	NR1H4
MEF2{A,B,C,D}.p2	-2.095	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NFATC1..3.p2	-2.097	NFATC3 NFATC2 NFATC1
FEV.p2	-2.133	FEV
TFEB.p2	-2.161	TFEB
FOX{D1,D2}.p2	-2.162	FOXD2 FOXD1
GTF2I.p2	-2.294	GTF2I
UGCAUAG	-2.352
LHX3,4.p2	-2.366	LHX3 LHX4
ETS1,2.p2	-2.388	ETS2 ETS1
HIC1.p2	-2.414	HIC1
STAT2,4,6.p2	-2.415	STAT2 STAT4 STAT6
ZIC1..3.p2	-2.505	ZIC1 ZIC2 ZIC3
HBP1_HMGB_SSRP1_UBTF.p2	-2.547	HMGB2 HMGB3 SSRP1 UBTF HBP1
EVI1.p2	-2.638	EVI1
FOXP3.p2	-2.667	FOXP3
TFAP2{A,C}.p2	-2.673	TFAP2C TFAP2A
MYOD1.p2	-2.692	MYOD1
PITX1..3.p2	-2.736	PITX2 PITX3 PITX1
AGCACCA	-2.809
MYFfamily.p2	-2.861	MYOD1 MYF6 MYF5 MYOG
MAZ.p2	-2.870	MAZ
SRF.p3	-2.906	SRF
HAND1,2.p2	-2.935	HAND1 HAND2
MZF1.p2	-2.991	MZF1
STAT1,3.p3	-2.994	STAT1 STAT3
TCF4_dimer.p2	-3.013	TCF4
ZNF423.p2	-3.074	ZNF423
ALX1.p2	-3.206	ALX1
POU5F1.p2	-3.351	POU5F1
GGCAGUG	-3.435
REST.p3	-3.508	REST
NFKB1_REL_RELA.p2	-3.564	RELA REL NFKB1
AAUACUG	-3.565
TBP.p2	-3.912	TBP
RFX1..5_RFXANK_RFXAP.p2	-4.001	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
JUN.p2	-4.055	JUN JUND JUNB
TFCP2.p2	-4.417	TFCP2
TGIF1.p2	-4.509	TGIF1
GATA1..3.p2	-4.737	GATA1 GATA2 GATA3
RREB1.p2	-4.924	RREB1
RXR{A,B,G}.p2	-5.143	RXRA RXRB RXRG
TLX1..3_NFIC{dimer}.p2	-5.839	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
UUUUUGC	-6.005
KLF12.p2	-6.607	KLF12
CUCCCAA	-7.945

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Sample name: NCI60_1_COLO205

Sorted z-values for every WM.