ISMARA results: NCI60_1

Sample name: NCI60_1_HCT-116

Sorted Z-values histogram for the sample NCI60_1_HCT-116

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	10.577	YY1
E2F1..5.p2	8.778	E2F4 E2F5 E2F2 E2F1 E2F3
NRF1.p2	8.547	NRF1
NFY{A,B,C}.p2	8.068	NFYC NFYB NFYA
ZNF143.p2	7.996	ZNF143
ELK1,4_GABP{A,B1}.p3	7.803	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	6.231	MYB
ELF1,2,4.p2	6.163	ELF2 ELF1 ELF4
bHLH_family.p2	5.552	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
TFDP1.p2	4.848	TFDP1
GGAAUGU	4.709
EHF.p2	4.470	EHF
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	4.264	ARNT MAX MYC USF1 BHLHB2 ARNT2
HIF1A.p2	4.110	HIF1A
KLF4.p3	3.684	KLF4
BPTF.p2	3.622	BPTF
ATF5_CREB3.p2	3.598	ATF5 CREB3
BACH2.p2	3.434	BACH2
NFE2L2.p2	3.341	NFE2L2
TP53.p2	3.339	TP53
UCACAUU	3.165
FOXD3.p2	3.020	FOXD3
UCCAGUU	2.458
UCAAGUA	2.408
CREB1.p2	2.371	CREB1
ATF4.p2	2.333	ATF4
IKZF1.p2	2.270	IKZF1
ZEB1.p2	2.137	ZEB1
ZBTB16.p2	2.091	ZBTB16
SOX{8,9,10}.p2	1.870	SOX9 SOX8 SOX10
FOXN1.p2	1.824	FOXN1
ESRRA.p2	1.816	ESRRA
AHR_ARNT_ARNT2.p2	1.796	ARNT AHR ARNT2
ZNF148.p2	1.749	ZNF148
XBP1.p3	1.730	XBP1
GUAGUGU	1.686
EP300.p2	1.654	EP300
PATZ1.p2	1.581	PATZ1
GFI1B.p2	1.564	GFI1B
PRRX1,2.p2	1.485	PRRX2 PRRX1
HES1.p2	1.404	HES1
PAX5.p2	1.358	PAX5
CTCF.p2	1.351	CTCF
CCAGUGU	1.349
AGUGGUU	1.227
FOXQ1.p2	1.197	FOXQ1
GAUUGUC	1.167
PITX1..3.p2	1.165	PITX2 PITX3 PITX1
AAGGCAC	1.143
ACAGUAC	1.138
NFE2L1.p2	1.128	NFE2L1
HOX{A6,A7,B6,B7}.p2	1.084	HOXB6 HOXA7 HOXB7 HOXA6
GUAACAG	1.009
AACGGAA	1.004
ONECUT1,2.p2	0.879	ONECUT2 ONECUT1
GGAGUGU	0.835
AGCAGCA	0.825
NFE2.p2	0.787	NFE2
GFI1.p2	0.782	GFI1
RXRG_dimer.p3	0.766	NR1H2 RXRA PPARG PPARA RXRB RXRG
AUGGCAC	0.764
HOX{A4,D4}.p2	0.756	HOXA4 HOXD4
NKX3-1.p2	0.754	NKX3-1
EGR1..3.p2	0.738	EGR3 EGR1 EGR2
SOX17.p2	0.726	SOX17
SPI1.p2	0.712	SPI1
CUACAGU	0.671
TFAP2{A,C}.p2	0.659	TFAP2C TFAP2A
GCAGCAU	0.656
SOX2.p2	0.517	SOX2
ACCCUGU	0.511
ACUGGCC	0.502
PBX1.p2	0.493	PBX1
CCUUCAU	0.485
CUUUGGU	0.477
SP1.p2	0.457	SP1
GUCAGUU	0.397
ADNP_IRX_SIX_ZHX.p2	0.392	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
NKX2-2,8.p2	0.338	NKX2-2 NKX2-8
ATF2.p2	0.280	ATF2
AUGGCUU	0.261
AACAGUC	0.260
AACCGUU	0.259
UCACAGU	0.221
HMGA1,2.p2	0.213	HMGA1 HMGA2
UUGUUCG	0.208
TFAP2B.p2	0.201	TFAP2B
ZNF238.p2	0.198	ZNF238
CGUACCG	0.182
ACAGUAU	0.157
AGGUAGU	0.115
VSX1,2.p2	0.090	VSX2 VSX1
ACCCGUA	0.087
EWSR1-FLI1.p2	0.070	FLI1 EWSR1
UAAUGCU	0.067
ACUGCAU	0.047
GUGCAAA	0.028
GAUAUGU	0.012
ARID5B.p2	0.011	ARID5B
LMO2.p2	0.011	LMO2
NR4A2.p2	-0.001	NR4A2
ZNF384.p2	-0.001	ZNF384
AUGUGCC	-0.005
NR5A1,2.p2	-0.014	NR5A1 NR5A2
GUAAACA	-0.046
NKX2-3_NKX2-5.p2	-0.056	NKX2-5 NKX2-3
CRX.p2	-0.069	CRX
RORA.p2	-0.071	RORA
AAUCUCA	-0.072
PPARG.p2	-0.108	PPARG
ESR1.p2	-0.116	ESR1
PAX3,7.p2	-0.117	PAX7 PAX3
AAUGCCC	-0.121
UGACCUA	-0.129
PDX1.p2	-0.152	PDX1
UUGGCAA	-0.168
SOX5.p2	-0.189	SOX5
CAGUGCA	-0.191
UAAGACG	-0.211
SPIB.p2	-0.238	SPIB
UGAAAUG	-0.248
HSF1,2.p2	-0.249	HSF1 HSF2
GCUGGUG	-0.270
GAUCAGA	-0.274
UGUGCGU	-0.275
UGCAUUG	-0.302
AUUGCAC	-0.302
AUGACAC	-0.327
AACCUGG	-0.334
PAX8.p2	-0.335	PAX8
GGACGGA	-0.348
NR6A1.p2	-0.365	NR6A1
FOXA2.p3	-0.398	FOXA2
GZF1.p2	-0.403	GZF1
NKX3-2.p2	-0.416	NKX3-2
SRF.p3	-0.417	SRF
CUX2.p2	-0.418	CUX2
AAUCUCU	-0.443
UUGGUCC	-0.445
CGUGUCU	-0.452
POU6F1.p2	-0.455	POU6F1
DMAP1_NCOR{1,2}_SMARC.p2	-0.462	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
NKX6-1,2.p2	-0.483	NKX6-1 NKX6-2
POU3F1..4.p2	-0.511	POU3F1 POU3F3 POU3F2 POU3F4
STAT5{A,B}.p2	-0.525	STAT5B STAT5A
TFAP4.p2	-0.528	TFAP4
AGCAGCG	-0.557
EBF1.p2	-0.582	EBF1
GCUACAU	-0.627
NANOG.p2	-0.663	NANOG
FOXO1,3,4.p2	-0.669	FOXO1 FOXO4 FOXO3
AGCUUAU	-0.699
MAFB.p2	-0.706	MAFB
TLX2.p2	-0.707	TLX2
CEBPA,B_DDIT3.p2	-0.742	DDIT3 CEBPA CEBPB
NFIL3.p2	-0.753	NFIL3
AACACUG	-0.760
LEF1_TCF7_TCF7L1,2.p2	-0.768	TCF7 TCF7L2 LEF1 TCF7L1
RXRA_VDR{dimer}.p2	-0.781	VDR	$logo of RXRA_VDR{dimer}.p2$
HLF.p2	-0.806	HLF
UUGGCAC	-0.807
T.p2	-0.816	T
ATF6.p2	-0.830	ATF6
CACAGUG	-0.832
FOXL1.p2	-0.836	FOXL1
HNF4A_NR2F1,2.p2	-0.869	NR2F1 NR2F2 HNF4A
PAX6.p2	-0.879	PAX6
AGCUGCC	-0.901
AGUGCAA	-0.916
GLI1..3.p2	-0.941	GLI1 GLI2 GLI3
NKX2-1,4.p2	-0.958	NKX2-1 NKX2-4
NANOG{mouse}.p2	-0.961	NANOG
EOMES.p2	-0.997	EOMES
UAAGACU	-1.016
GGCAAGA	-1.072
RBPJ.p2	-1.092	RBPJ
CDC5L.p2	-1.163	CDC5L
ZIC1..3.p2	-1.181	ZIC1 ZIC2 ZIC3
MYBL2.p2	-1.199	MYBL2
AAGGUGC	-1.207
HOXA9_MEIS1.p2	-1.223	MEIS1 HOXA9
AAGUGCU	-1.225
GTF2I.p2	-1.288	GTF2I
SRY.p2	-1.306	SRY
NFATC1..3.p2	-1.312	NFATC3 NFATC2 NFATC1
FOX{F1,F2,J1}.p2	-1.339	FOXF2 FOXJ1 FOXF1
AIRE.p2	-1.363	AIRE
IKZF2.p2	-1.421	IKZF2
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.430	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
FOX{I1,J2}.p2	-1.480	FOXI1 FOXJ2
AR.p2	-1.481	AR
AAUACUG	-1.484
MZF1.p2	-1.496	MZF1
POU5F1_SOX2{dimer}.p2	-1.510	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GAGAACU	-1.584
DBP.p2	-1.612	DBP
PRDM1.p3	-1.651	PRDM1
STAT2,4,6.p2	-1.653	STAT2 STAT4 STAT6
CAGCAGG	-1.658
CCAGCAU	-1.664
PAX4.p2	-1.665	PAX4
PAX2.p2	-1.675	PAX2
SPZ1.p2	-1.686	SPZ1
RREB1.p2	-1.687	RREB1
UAUUGCU	-1.691
MTF1.p2	-1.705	MTF1
GGCAGUG	-1.712
SREBF1,2.p2	-1.764	SREBF1 SREBF2
SNAI1..3.p2	-1.772	SNAI2 SNAI1 SNAI3
FOX{D1,D2}.p2	-1.824	FOXD2 FOXD1
GAGAUGA	-1.824
TEAD1.p2	-1.839	TEAD1 TEAD2 TEAD3 TEAD4
UCCCUUU	-1.902
HMX1.p2	-1.922	HMX1
TFEB.p2	-1.924	TFEB
ACAUUCA	-1.935
RXR{A,B,G}.p2	-1.958	RXRA RXRB RXRG
ALX1.p2	-1.994	ALX1
LHX3,4.p2	-1.999	LHX3 LHX4
MSX1,2.p2	-2.007	MSX1 MSX2
CDX1,2,4.p2	-2.030	CDX1 CDX2 CDX4
GGAAGAC	-2.071
NR1H4.p2	-2.154	NR1H4
POU2F1..3.p2	-2.170	POU2F2 POU2F1 POU2F3
ZFP161.p2	-2.175	ZFP161
NR3C1.p2	-2.187	NR3C1
TAL1_TCF{3,4,12}.p2	-2.199	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGUGCUU	-2.213
NFKB1_REL_RELA.p2	-2.217	RELA REL NFKB1
TBX4,5.p2	-2.265	TBX5 TBX4
CCCUGAG	-2.287
FOXP3.p2	-2.288	FOXP3
MAZ.p2	-2.318	MAZ
MEF2{A,B,C,D}.p2	-2.322	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HOX{A5,B5}.p2	-2.347	HOXB5 HOXA5
POU1F1.p2	-2.352	POU1F1
MYOD1.p2	-2.390	MYOD1
UGCAUAG	-2.399
TBP.p2	-2.435	TBP
FOSL2.p2	-2.438	FOSL2
STAT1,3.p3	-2.464	STAT1 STAT3
AGCACCA	-2.609
AAAGUGC	-2.611
IRF1,2,7.p3	-2.627	IRF1 IRF2 IRF7
GATA6.p2	-2.630	GATA6
ZNF423.p2	-2.647	ZNF423
TCF4_dimer.p2	-2.730	TCF4
NFIX.p2	-2.752	NFIX
GAGGUAG	-2.753
HNF1A.p2	-2.761	HNF1A
GATA1..3.p2	-2.785	GATA1 GATA2 GATA3
FEV.p2	-2.799	FEV
ZBTB6.p2	-2.874	ZBTB6
RFX1..5_RFXANK_RFXAP.p2	-2.874	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
HBP1_HMGB_SSRP1_UBTF.p2	-2.875	HMGB2 HMGB3 SSRP1 UBTF HBP1
EN1,2.p2	-2.877	EN1 EN2
FOX{C1,C2}.p2	-2.932	FOXC1 FOXC2
ETS1,2.p2	-3.075	ETS2 ETS1
GTF2A1,2.p2	-3.134	GTF2A1 GTF2A2
NHLH1,2.p2	-3.225	NHLH1 NHLH2
REST.p3	-3.309	REST
JUN.p2	-3.328	JUN JUND JUNB
SMAD1..7,9.p2	-3.444	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GGCUCAG	-3.461
EVI1.p2	-3.550	EVI1
MYFfamily.p2	-3.556	MYOD1 MYF6 MYF5 MYOG
UUUUUGC	-3.904
HAND1,2.p2	-4.110	HAND1 HAND2
HIC1.p2	-4.263	HIC1
TLX1..3_NFIC{dimer}.p2	-4.280	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU5F1.p2	-4.347	POU5F1
TFCP2.p2	-4.415	TFCP2
KLF12.p2	-4.478	KLF12
RUNX1..3.p2	-4.507	RUNX1 RUNX3 RUNX2
TGIF1.p2	-7.136	TGIF1
CUCCCAA	-7.711

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Sample name: NCI60_1_HCT-116

Sorted z-values for every WM.