ISMARA results: NCI60_1

Sample name: NCI60_1_HL-60

Sorted Z-values histogram for the sample NCI60_1_HL-60

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
E2F1..5.p2	14.137	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	12.104	YY1
ZNF143.p2	10.256	ZNF143
NRF1.p2	8.472	NRF1
NFY{A,B,C}.p2	7.791	NFYC NFYB NFYA
ELK1,4_GABP{A,B1}.p3	7.786	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	6.859	ARNT MAX MYC USF1 BHLHB2 ARNT2
MYB.p2	6.112	MYB
TFDP1.p2	6.104	TFDP1
ESRRA.p2	5.306	ESRRA
AHR_ARNT_ARNT2.p2	5.242	ARNT AHR ARNT2
SPIB.p2	5.061	SPIB
ELF1,2,4.p2	4.970	ELF2 ELF1 ELF4
SPI1.p2	4.259	SPI1
bHLH_family.p2	3.946	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	3.697	HIF1A
EHF.p2	3.602	EHF
BPTF.p2	3.323	BPTF
ATF4.p2	3.195	ATF4
HES1.p2	2.827	HES1
UCACAUU	2.687
UCAAGUA	2.613
FOXN1.p2	2.589	FOXN1
NKX3-2.p2	2.543	NKX3-2
NFE2L2.p2	2.367	NFE2L2
ZBTB16.p2	2.302	ZBTB16
ATF5_CREB3.p2	2.260	ATF5 CREB3
HOX{A4,D4}.p2	2.236	HOXA4 HOXD4
SOX5.p2	2.151	SOX5
NKX2-2,8.p2	2.093	NKX2-2 NKX2-8
PBX1.p2	2.040	PBX1
FOXD3.p2	1.990	FOXD3
STAT5{A,B}.p2	1.959	STAT5B STAT5A
GGAAUGU	1.787
EP300.p2	1.753	EP300
RUNX1..3.p2	1.715	RUNX1 RUNX3 RUNX2
AACAGUC	1.602
DMAP1_NCOR{1,2}_SMARC.p2	1.497	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
PITX1..3.p2	1.473	PITX2 PITX3 PITX1
AGGUAGU	1.413
SOX2.p2	1.343	SOX2
CAGUGCA	1.321
CREB1.p2	1.288	CREB1
ACAGUAU	1.275
SP1.p2	1.195	SP1
TP53.p2	1.165	TP53
MAFB.p2	1.092	MAFB
AGUGGUU	1.077
ADNP_IRX_SIX_ZHX.p2	1.045	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
XBP1.p3	1.043	XBP1
UAAUGCU	1.030
RXRA_VDR{dimer}.p2	1.010	VDR	$logo of RXRA_VDR{dimer}.p2$
AUGGCAC	1.009
MYBL2.p2	0.830	MYBL2
GCAGCAU	0.811
CTCF.p2	0.810	CTCF
AIRE.p2	0.794	AIRE
HLF.p2	0.780	HLF
SOX17.p2	0.720	SOX17
AGCAGCG	0.715
GUAAACA	0.706
UGCAUUG	0.653
ZFP161.p2	0.648	ZFP161
ACAGUAC	0.620
ACUGCAU	0.601
FOXL1.p2	0.599	FOXL1
PATZ1.p2	0.582	PATZ1
AACACUG	0.565
GGAGUGU	0.556
UGACCUA	0.551
FOXQ1.p2	0.521	FOXQ1
NR4A2.p2	0.496	NR4A2
ZNF148.p2	0.493	ZNF148
FOXA2.p3	0.490	FOXA2
GUAACAG	0.484
AAUCUCA	0.461
UGAAAUG	0.458
UUGUUCG	0.416
GAUUGUC	0.407
PPARG.p2	0.406	PPARG
RXRG_dimer.p3	0.397	NR1H2 RXRA PPARG PPARA RXRB RXRG
GCUACAU	0.360
CCUUCAU	0.357
UUGGCAA	0.325
UGUGCUU	0.325
NKX6-1,2.p2	0.309	NKX6-1 NKX6-2
VSX1,2.p2	0.271	VSX2 VSX1
AUGGCUU	0.251
AAUCUCU	0.202
ZEB1.p2	0.201	ZEB1
ALX1.p2	0.155	ALX1
NFKB1_REL_RELA.p2	0.141	RELA REL NFKB1
AACCGUU	0.139
ACCCGUA	0.136
NKX2-1,4.p2	0.113	NKX2-1 NKX2-4
GFI1B.p2	0.066	GFI1B
GAGGUAG	0.063
FOX{F1,F2,J1}.p2	0.021	FOXF2 FOXJ1 FOXF1
UGUGCGU	0.009
GAUAUGU	0.002
NFIL3.p2	-0.004	NFIL3
T.p2	-0.018	T
CEBPA,B_DDIT3.p2	-0.033	DDIT3 CEBPA CEBPB
EOMES.p2	-0.042	EOMES
GCUGGUG	-0.057
RBPJ.p2	-0.073	RBPJ
PAX2.p2	-0.092	PAX2
AAGGUGC	-0.098
AUGUGCC	-0.099
AGUGCAA	-0.104
PAX3,7.p2	-0.110	PAX7 PAX3
CUACAGU	-0.110
UCCAGUU	-0.157
PAX8.p2	-0.161	PAX8
NANOG.p2	-0.171	NANOG
PAX5.p2	-0.175	PAX5
CCCUGAG	-0.181
SPZ1.p2	-0.185	SPZ1
UCACAGU	-0.192
PAX6.p2	-0.206	PAX6
GGCAAGA	-0.207
ZNF238.p2	-0.224	ZNF238
CUX2.p2	-0.225	CUX2
IKZF2.p2	-0.253	IKZF2
AACCUGG	-0.258
AACGGAA	-0.268
PRRX1,2.p2	-0.293	PRRX2 PRRX1
AUGACAC	-0.302
ARID5B.p2	-0.304	ARID5B
IRF1,2,7.p3	-0.305	IRF1 IRF2 IRF7
HOXA9_MEIS1.p2	-0.308	MEIS1 HOXA9
TLX2.p2	-0.312	TLX2
NKX3-1.p2	-0.313	NKX3-1
AGCUUAU	-0.316
AGCUGCC	-0.324
ACCCUGU	-0.348
NFE2.p2	-0.363	NFE2
CGUGUCU	-0.373
ZNF423.p2	-0.377	ZNF423
CDX1,2,4.p2	-0.382	CDX1 CDX2 CDX4
FOX{I1,J2}.p2	-0.384	FOXI1 FOXJ2
GZF1.p2	-0.389	GZF1
CACAGUG	-0.392
CDC5L.p2	-0.411	CDC5L
ETS1,2.p2	-0.435	ETS2 ETS1
BACH2.p2	-0.475	BACH2
CRX.p2	-0.509	CRX
EWSR1-FLI1.p2	-0.514	FLI1 EWSR1
UAUUGCU	-0.519
TFAP2B.p2	-0.588	TFAP2B
GGACGGA	-0.622
UAAGACG	-0.643
GFI1.p2	-0.657	GFI1
AAUGCCC	-0.672
IKZF1.p2	-0.743	IKZF1
ACUGGCC	-0.746
HAND1,2.p2	-0.758	HAND1 HAND2
FOX{C1,C2}.p2	-0.759	FOXC1 FOXC2
AAGGCAC	-0.763
GAUCAGA	-0.765
PDX1.p2	-0.800	PDX1
SOX{8,9,10}.p2	-0.803	SOX9 SOX8 SOX10
AGCACCA	-0.851
CCAGUGU	-0.881
MSX1,2.p2	-0.919	MSX1 MSX2
ACAUUCA	-0.926
LMO2.p2	-0.961	LMO2
UUGGUCC	-0.974
RORA.p2	-0.978	RORA
CGUACCG	-1.006
UAAGACU	-1.020
GAGAACU	-1.031
POU3F1..4.p2	-1.076	POU3F1 POU3F3 POU3F2 POU3F4
NR3C1.p2	-1.090	NR3C1
AAUACUG	-1.095
LHX3,4.p2	-1.113	LHX3 LHX4
GLI1..3.p2	-1.122	GLI1 GLI2 GLI3
ONECUT1,2.p2	-1.126	ONECUT2 ONECUT1
FOXO1,3,4.p2	-1.133	FOXO1 FOXO4 FOXO3
HOX{A6,A7,B6,B7}.p2	-1.171	HOXB6 HOXA7 HOXB7 HOXA6
GAGAUGA	-1.204
UGCAUAG	-1.228
HMGA1,2.p2	-1.304	HMGA1 HMGA2
FOXP3.p2	-1.317	FOXP3
ATF6.p2	-1.327	ATF6
GGCAGUG	-1.355
ZNF384.p2	-1.367	ZNF384
HNF4A_NR2F1,2.p2	-1.371	NR2F1 NR2F2 HNF4A
NR5A1,2.p2	-1.405	NR5A1 NR5A2
MYOD1.p2	-1.407	MYOD1
GUCAGUU	-1.419
CUUUGGU	-1.428
UUGGCAC	-1.461
GGAAGAC	-1.464
HMX1.p2	-1.485	HMX1
ESR1.p2	-1.497	ESR1
AR.p2	-1.497	AR
AGCAGCA	-1.503
PRDM1.p3	-1.571	PRDM1
POU5F1.p2	-1.595	POU5F1
POU1F1.p2	-1.609	POU1F1
NR1H4.p2	-1.611	NR1H4
NKX2-3_NKX2-5.p2	-1.634	NKX2-5 NKX2-3
MZF1.p2	-1.645	MZF1
UCCCUUU	-1.661
GATA6.p2	-1.673	GATA6
TBX4,5.p2	-1.680	TBX5 TBX4
POU5F1_SOX2{dimer}.p2	-1.686	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NHLH1,2.p2	-1.700	NHLH1 NHLH2
SREBF1,2.p2	-1.753	SREBF1 SREBF2
TAL1_TCF{3,4,12}.p2	-1.772	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
ZBTB6.p2	-1.786	ZBTB6
EGR1..3.p2	-1.810	EGR3 EGR1 EGR2
AUUGCAC	-1.860
MEF2{A,B,C,D}.p2	-1.883	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.899	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AAGUGCU	-1.940
FOSL2.p2	-1.943	FOSL2
HOX{A5,B5}.p2	-1.970	HOXB5 HOXA5
DBP.p2	-1.973	DBP
HNF1A.p2	-2.003	HNF1A
POU6F1.p2	-2.061	POU6F1
HBP1_HMGB_SSRP1_UBTF.p2	-2.066	HMGB2 HMGB3 SSRP1 UBTF HBP1
TGIF1.p2	-2.088	TGIF1
UUUUUGC	-2.122
STAT1,3.p3	-2.123	STAT1 STAT3
TCF4_dimer.p2	-2.127	TCF4
NR6A1.p2	-2.128	NR6A1
ATF2.p2	-2.159	ATF2
NANOG{mouse}.p2	-2.232	NANOG
FEV.p2	-2.246	FEV
POU2F1..3.p2	-2.309	POU2F2 POU2F1 POU2F3
CCAGCAU	-2.335
MAZ.p2	-2.363	MAZ
GUAGUGU	-2.375
TFEB.p2	-2.471	TFEB
NFIX.p2	-2.471	NFIX
NFE2L1.p2	-2.517	NFE2L1
PAX4.p2	-2.555	PAX4
LEF1_TCF7_TCF7L1,2.p2	-2.566	TCF7 TCF7L2 LEF1 TCF7L1
HSF1,2.p2	-2.614	HSF1 HSF2
RXR{A,B,G}.p2	-2.626	RXRA RXRB RXRG
NFATC1..3.p2	-2.695	NFATC3 NFATC2 NFATC1
GTF2A1,2.p2	-2.697	GTF2A1 GTF2A2
FOX{D1,D2}.p2	-2.766	FOXD2 FOXD1
SRY.p2	-2.789	SRY
EVI1.p2	-2.792	EVI1
GGCUCAG	-3.032
GUGCAAA	-3.041
TBP.p2	-3.080	TBP
MYFfamily.p2	-3.098	MYOD1 MYF6 MYF5 MYOG
CAGCAGG	-3.132
TFAP4.p2	-3.205	TFAP4
ZIC1..3.p2	-3.233	ZIC1 ZIC2 ZIC3
REST.p3	-3.261	REST
TFAP2{A,C}.p2	-3.359	TFAP2C TFAP2A
EBF1.p2	-3.443	EBF1
CUCCCAA	-3.445
TLX1..3_NFIC{dimer}.p2	-3.600	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
EN1,2.p2	-3.650	EN1 EN2
SNAI1..3.p2	-3.691	SNAI2 SNAI1 SNAI3
SRF.p3	-3.734	SRF
KLF4.p3	-3.907	KLF4
JUN.p2	-3.949	JUN JUND JUNB
KLF12.p2	-4.125	KLF12
GATA1..3.p2	-4.206	GATA1 GATA2 GATA3
MTF1.p2	-4.312	MTF1
SMAD1..7,9.p2	-4.406	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
RFX1..5_RFXANK_RFXAP.p2	-4.452	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
GTF2I.p2	-4.741	GTF2I
AAAGUGC	-4.746
STAT2,4,6.p2	-4.789	STAT2 STAT4 STAT6
TFCP2.p2	-4.858	TFCP2
RREB1.p2	-5.413	RREB1
TEAD1.p2	-5.497	TEAD1 TEAD2 TEAD3 TEAD4
HIC1.p2	-5.558	HIC1

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Sample name: NCI60_1_HL-60

Sorted z-values for every WM.