ISMARA results: NCI60_1

Sample name: NCI60_1_HOP-62

Sorted Z-values histogram for the sample NCI60_1_HOP-62

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	11.095	YY1
NRF1.p2	8.186	NRF1
ELK1,4_GABP{A,B1}.p3	8.166	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ZNF143.p2	7.143	ZNF143
NFY{A,B,C}.p2	7.059	NFYC NFYB NFYA
ELF1,2,4.p2	5.924	ELF2 ELF1 ELF4
E2F1..5.p2	5.609	E2F4 E2F5 E2F2 E2F1 E2F3
TFDP1.p2	4.825	TFDP1
bHLH_family.p2	4.672	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	4.561	ARNT MAX MYC USF1 BHLHB2 ARNT2
EHF.p2	4.294	EHF
MYB.p2	3.987	MYB
GGAAUGU	3.910
ATF5_CREB3.p2	3.901	ATF5 CREB3
XBP1.p3	3.887	XBP1
HIF1A.p2	3.804	HIF1A
FOXD3.p2	3.485	FOXD3
KLF4.p3	3.333	KLF4
ESRRA.p2	3.264	ESRRA
BACH2.p2	3.171	BACH2
SP1.p2	3.132	SP1
AAGGCAC	3.106
PAX5.p2	2.815	PAX5
NFE2.p2	2.778	NFE2
UCCAGUU	2.709
BPTF.p2	2.562	BPTF
HES1.p2	2.546	HES1
NKX2-2,8.p2	2.266	NKX2-2 NKX2-8
TFAP2B.p2	2.215	TFAP2B
GFI1.p2	2.208	GFI1
ATF4.p2	2.099	ATF4
NFE2L1.p2	1.934	NFE2L1
FOXQ1.p2	1.852	FOXQ1
IKZF1.p2	1.767	IKZF1
UCACAUU	1.753
SOX17.p2	1.675	SOX17
CCAGUGU	1.644
EP300.p2	1.504	EP300
AGUGGUU	1.487
GUAACAG	1.369
GCAGCAU	1.321
PAX4.p2	1.318	PAX4
TP53.p2	1.300	TP53
NFKB1_REL_RELA.p2	1.296	RELA REL NFKB1
ACAGUAU	1.242
NFE2L2.p2	1.219	NFE2L2
UCACAGU	1.207
PBX1.p2	1.144	PBX1
UCAAGUA	1.115
SOX{8,9,10}.p2	1.080	SOX9 SOX8 SOX10
FOXN1.p2	1.066	FOXN1
ZNF148.p2	1.063	ZNF148
PITX1..3.p2	1.057	PITX2 PITX3 PITX1
RXRG_dimer.p3	1.055	NR1H2 RXRA PPARG PPARA RXRB RXRG
CCUUCAU	1.047
HOX{A4,D4}.p2	1.001	HOXA4 HOXD4
FOS_FOS{B,L1}_JUN{B,D}.p2	0.996	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AAUGCCC	0.956
AUUGCAC	0.950
PRRX1,2.p2	0.893	PRRX2 PRRX1
ESR1.p2	0.868	ESR1
AGGUAGU	0.766
AGCACCA	0.631
CREB1.p2	0.595	CREB1
GUAGUGU	0.564
NANOG.p2	0.493	NANOG
GFI1B.p2	0.422	GFI1B
HOX{A6,A7,B6,B7}.p2	0.403	HOXB6 HOXA7 HOXB7 HOXA6
TEAD1.p2	0.395	TEAD1 TEAD2 TEAD3 TEAD4
ONECUT1,2.p2	0.393	ONECUT2 ONECUT1
AAUACUG	0.358
AACCUGG	0.348
AGCUGCC	0.332
SPI1.p2	0.323	SPI1
ZBTB6.p2	0.311	ZBTB6
ZNF238.p2	0.279	ZNF238
AACGGAA	0.252
ARID5B.p2	0.237	ARID5B
TFAP2{A,C}.p2	0.236	TFAP2C TFAP2A
CUX2.p2	0.225	CUX2
STAT2,4,6.p2	0.203	STAT2 STAT4 STAT6
AHR_ARNT_ARNT2.p2	0.194	ARNT AHR ARNT2
AUGACAC	0.194
AACAGUC	0.192
CAGUGCA	0.154
AAGGUGC	0.149
AGCAGCA	0.141
NR6A1.p2	0.133	NR6A1
AACACUG	0.120
ACAGUAC	0.119
SRF.p3	0.111	SRF
CGUACCG	0.108
AAUCUCA	0.106
MYBL2.p2	0.105	MYBL2
AACCGUU	0.074
ZBTB16.p2	0.057	ZBTB16
CUUUGGU	0.049
LMO2.p2	0.047	LMO2
CUACAGU	0.035
UUGGUCC	0.035
ACCCGUA	0.029
GAUUGUC	0.006
GGAGUGU	-0.015
CDX1,2,4.p2	-0.019	CDX1 CDX2 CDX4
GAUAUGU	-0.052
ADNP_IRX_SIX_ZHX.p2	-0.068	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GGCAAGA	-0.072
GLI1..3.p2	-0.075	GLI1 GLI2 GLI3
LHX3,4.p2	-0.080	LHX3 LHX4
AUGUGCC	-0.082
UGCAUUG	-0.084
UGACCUA	-0.107
RXR{A,B,G}.p2	-0.123	RXRA RXRB RXRG
ACUGGCC	-0.125
GCUGGUG	-0.143
PAX8.p2	-0.156	PAX8
ACUGCAU	-0.163
GZF1.p2	-0.166	GZF1
GCUACAU	-0.169
UUGGCAA	-0.171
POU3F1..4.p2	-0.172	POU3F1 POU3F3 POU3F2 POU3F4
AGCUUAU	-0.174
UAAUGCU	-0.190
EWSR1-FLI1.p2	-0.197	FLI1 EWSR1
UUGUUCG	-0.275
HOXA9_MEIS1.p2	-0.288	MEIS1 HOXA9
GGACGGA	-0.299
VSX1,2.p2	-0.299	VSX2 VSX1
FEV.p2	-0.301	FEV
UUGGCAC	-0.326
ZNF384.p2	-0.331	ZNF384
NKX6-1,2.p2	-0.331	NKX6-1 NKX6-2
PDX1.p2	-0.350	PDX1
SOX2.p2	-0.380	SOX2
PAX3,7.p2	-0.398	PAX7 PAX3
HLF.p2	-0.412	HLF
CAGCAGG	-0.425
NFATC1..3.p2	-0.432	NFATC3 NFATC2 NFATC1
NKX3-1.p2	-0.465	NKX3-1
ACCCUGU	-0.487
AGUGCAA	-0.492
HSF1,2.p2	-0.519	HSF1 HSF2
UGUGCGU	-0.520
GUCAGUU	-0.530
NFIL3.p2	-0.571	NFIL3
TFAP4.p2	-0.599	TFAP4
PATZ1.p2	-0.603	PATZ1
HMGA1,2.p2	-0.604	HMGA1 HMGA2
AAUCUCU	-0.614
HMX1.p2	-0.628	HMX1
POU5F1_SOX2{dimer}.p2	-0.629	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NR4A2.p2	-0.644	NR4A2
PRDM1.p3	-0.651	PRDM1
PAX6.p2	-0.655	PAX6
DMAP1_NCOR{1,2}_SMARC.p2	-0.679	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
MSX1,2.p2	-0.686	MSX1 MSX2
NKX3-2.p2	-0.726	NKX3-2
STAT5{A,B}.p2	-0.736	STAT5B STAT5A
CTCF.p2	-0.741	CTCF
CGUGUCU	-0.744
NKX2-3_NKX2-5.p2	-0.770	NKX2-5 NKX2-3
ATF2.p2	-0.783	ATF2
FOXA2.p3	-0.784	FOXA2
T.p2	-0.793	T
CEBPA,B_DDIT3.p2	-0.813	DDIT3 CEBPA CEBPB
SPIB.p2	-0.824	SPIB
CRX.p2	-0.834	CRX
GUAAACA	-0.851
LEF1_TCF7_TCF7L1,2.p2	-0.897	TCF7 TCF7L2 LEF1 TCF7L1
FOXL1.p2	-0.929	FOXL1
GAGAACU	-0.970
HOX{A5,B5}.p2	-0.988	HOXB5 HOXA5
GUGCAAA	-1.000
EOMES.p2	-1.006	EOMES
UAAGACU	-1.035
TFEB.p2	-1.086	TFEB
AUGGCUU	-1.090
UAAGACG	-1.090
CCAGCAU	-1.100
SRY.p2	-1.108	SRY
FOXO1,3,4.p2	-1.110	FOXO1 FOXO4 FOXO3
FOX{F1,F2,J1}.p2	-1.117	FOXF2 FOXJ1 FOXF1
GAUCAGA	-1.127
AGCAGCG	-1.133
NR3C1.p2	-1.134	NR3C1
RBPJ.p2	-1.146	RBPJ
STAT1,3.p3	-1.207	STAT1 STAT3
EBF1.p2	-1.234	EBF1
SOX5.p2	-1.240	SOX5
GTF2A1,2.p2	-1.306	GTF2A1 GTF2A2
ATF6.p2	-1.315	ATF6
AR.p2	-1.342	AR
AUGGCAC	-1.354
NFIX.p2	-1.370	NFIX
GGAAGAC	-1.376
FOSL2.p2	-1.385	FOSL2
MAFB.p2	-1.415	MAFB
JUN.p2	-1.419	JUN JUND JUNB
EGR1..3.p2	-1.452	EGR3 EGR1 EGR2
CACAGUG	-1.491
RXRA_VDR{dimer}.p2	-1.501	VDR	$logo of RXRA_VDR{dimer}.p2$
NKX2-1,4.p2	-1.504	NKX2-1 NKX2-4
GGCAGUG	-1.509
GAGAUGA	-1.510
GGCUCAG	-1.533
TFCP2.p2	-1.550	TFCP2
UGUGCUU	-1.566
ZEB1.p2	-1.585	ZEB1
CDC5L.p2	-1.588	CDC5L
MZF1.p2	-1.606	MZF1
TLX2.p2	-1.609	TLX2
RORA.p2	-1.613	RORA
UAUUGCU	-1.646
UCCCUUU	-1.665
IKZF2.p2	-1.677	IKZF2
UGCAUAG	-1.679
AIRE.p2	-1.701	AIRE
ZFP161.p2	-1.715	ZFP161
PPARG.p2	-1.748	PPARG
FOX{C1,C2}.p2	-1.753	FOXC1 FOXC2
CCCUGAG	-1.759
SPZ1.p2	-1.789	SPZ1
POU6F1.p2	-1.814	POU6F1
HIC1.p2	-1.829	HIC1
ZNF423.p2	-1.848	ZNF423
AAGUGCU	-1.854
RFX1..5_RFXANK_RFXAP.p2	-1.857	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MAZ.p2	-1.861	MAZ
EN1,2.p2	-1.879	EN1 EN2
RUNX1..3.p2	-1.884	RUNX1 RUNX3 RUNX2
IRF1,2,7.p3	-1.905	IRF1 IRF2 IRF7
UGAAAUG	-1.907
NHLH1,2.p2	-1.910	NHLH1 NHLH2
NR5A1,2.p2	-1.925	NR5A1 NR5A2
ACAUUCA	-1.950
ALX1.p2	-1.956	ALX1
POU2F1..3.p2	-2.060	POU2F2 POU2F1 POU2F3
ZIC1..3.p2	-2.100	ZIC1 ZIC2 ZIC3
GATA1..3.p2	-2.107	GATA1 GATA2 GATA3
FOX{I1,J2}.p2	-2.158	FOXI1 FOXJ2
DBP.p2	-2.198	DBP
TCF4_dimer.p2	-2.233	TCF4
HBP1_HMGB_SSRP1_UBTF.p2	-2.261	HMGB2 HMGB3 SSRP1 UBTF HBP1
GATA6.p2	-2.282	GATA6
TLX1..3_NFIC{dimer}.p2	-2.289	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NANOG{mouse}.p2	-2.300	NANOG
REST.p3	-2.375	REST
HNF1A.p2	-2.415	HNF1A
SREBF1,2.p2	-2.432	SREBF1 SREBF2
FOX{D1,D2}.p2	-2.436	FOXD2 FOXD1
TBP.p2	-2.590	TBP
PAX2.p2	-2.751	PAX2
AAAGUGC	-2.789
MEF2{A,B,C,D}.p2	-2.821	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
MTF1.p2	-2.830	MTF1
TAL1_TCF{3,4,12}.p2	-2.863	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GTF2I.p2	-2.914	GTF2I
NR1H4.p2	-3.058	NR1H4
GAGGUAG	-3.112
POU1F1.p2	-3.181	POU1F1
FOXP3.p2	-3.241	FOXP3
HNF4A_NR2F1,2.p2	-3.244	NR2F1 NR2F2 HNF4A
TBX4,5.p2	-3.269	TBX5 TBX4
MYFfamily.p2	-3.316	MYOD1 MYF6 MYF5 MYOG
KLF12.p2	-3.428	KLF12
POU5F1.p2	-3.434	POU5F1
SNAI1..3.p2	-3.654	SNAI2 SNAI1 SNAI3
SMAD1..7,9.p2	-4.051	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
EVI1.p2	-4.299	EVI1
UUUUUGC	-4.513
ETS1,2.p2	-4.590	ETS2 ETS1
MYOD1.p2	-4.689	MYOD1
TGIF1.p2	-4.794	TGIF1
RREB1.p2	-4.947	RREB1
HAND1,2.p2	-5.240	HAND1 HAND2
CUCCCAA	-6.617

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Sample name: NCI60_1_HOP-62

Sorted z-values for every WM.