ISMARA results: NCI60_1

Sample name: NCI60_1_HS578T

Sorted Z-values histogram for the sample NCI60_1_HS578T

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
XBP1.p3	8.438	XBP1
NRF1.p2	6.013	NRF1
YY1.p2	5.862	YY1
MYB.p2	5.803	MYB
TFDP1.p2	5.703	TFDP1
SRF.p3	5.534	SRF
ELF1,2,4.p2	4.877	ELF2 ELF1 ELF4
E2F1..5.p2	4.543	E2F4 E2F5 E2F2 E2F1 E2F3
ZNF143.p2	4.468	ZNF143
NFY{A,B,C}.p2	4.104	NFYC NFYB NFYA
ELK1,4_GABP{A,B1}.p3	3.881	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ATF5_CREB3.p2	3.860	ATF5 CREB3
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.839	ARNT MAX MYC USF1 BHLHB2 ARNT2
TFAP2B.p2	3.799	TFAP2B
HIF1A.p2	3.745	HIF1A
GGAAUGU	3.720
KLF4.p3	3.719	KLF4
AAUACUG	3.715
AGCACCA	3.617
ATF4.p2	3.487	ATF4
TEAD1.p2	3.485	TEAD1 TEAD2 TEAD3 TEAD4
AGUGGUU	3.068
AAGGCAC	2.880
HOX{A6,A7,B6,B7}.p2	2.809	HOXB6 HOXA7 HOXB7 HOXA6
UCCAGUU	2.784
BPTF.p2	2.769	BPTF
GUAAACA	2.715
bHLH_family.p2	2.365	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
GFI1.p2	2.335	GFI1
NKX6-1,2.p2	2.264	NKX6-1 NKX6-2
GUAGUGU	2.220
NFE2L1.p2	2.193	NFE2L1
GUGCAAA	2.155
BACH2.p2	2.074	BACH2
EP300.p2	2.039	EP300
SOX17.p2	1.987	SOX17
SOX{8,9,10}.p2	1.907	SOX9 SOX8 SOX10
AAGGUGC	1.852
ZNF384.p2	1.841	ZNF384
AACACUG	1.829
MAFB.p2	1.682	MAFB
UCAAGUA	1.638
UUGGCAA	1.552
ZNF238.p2	1.542	ZNF238
ZNF148.p2	1.541	ZNF148
CUUUGGU	1.513
AHR_ARNT_ARNT2.p2	1.496	ARNT AHR ARNT2
ZBTB6.p2	1.437	ZBTB6
NKX2-2,8.p2	1.389	NKX2-2 NKX2-8
PAX5.p2	1.297	PAX5
PRDM1.p3	1.282	PRDM1
FOS_FOS{B,L1}_JUN{B,D}.p2	1.198	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
TFAP2{A,C}.p2	1.171	TFAP2C TFAP2A
SP1.p2	1.159	SP1
CDX1,2,4.p2	1.159	CDX1 CDX2 CDX4
FOXD3.p2	1.149	FOXD3
LEF1_TCF7_TCF7L1,2.p2	1.130	TCF7 TCF7L2 LEF1 TCF7L1
HSF1,2.p2	1.122	HSF1 HSF2
EHF.p2	1.077	EHF
RXRG_dimer.p3	1.009	NR1H2 RXRA PPARG PPARA RXRB RXRG
NFE2L2.p2	0.987	NFE2L2
SPIB.p2	0.949	SPIB
IKZF2.p2	0.928	IKZF2
RXR{A,B,G}.p2	0.919	RXRA RXRB RXRG
AACGGAA	0.857
HBP1_HMGB_SSRP1_UBTF.p2	0.851	HMGB2 HMGB3 SSRP1 UBTF HBP1
TP53.p2	0.850	TP53
ARID5B.p2	0.844	ARID5B
HES1.p2	0.824	HES1
ONECUT1,2.p2	0.820	ONECUT2 ONECUT1
AUUGCAC	0.819
UUGUUCG	0.811
GUCAGUU	0.805
GFI1B.p2	0.768	GFI1B
UGAAAUG	0.767
NFATC1..3.p2	0.751	NFATC3 NFATC2 NFATC1
CAGUGCA	0.742
ATF6.p2	0.704	ATF6
TFAP4.p2	0.692	TFAP4
ESRRA.p2	0.688	ESRRA
PRRX1,2.p2	0.633	PRRX2 PRRX1
GCAGCAU	0.599
FOXQ1.p2	0.580	FOXQ1
POU6F1.p2	0.551	POU6F1
PBX1.p2	0.535	PBX1
MYBL2.p2	0.525	MYBL2
CTCF.p2	0.516	CTCF
CCAGUGU	0.464
AGGUAGU	0.441
HMGA1,2.p2	0.437	HMGA1 HMGA2
GAUAUGU	0.405
AGUGCAA	0.394
HOX{A4,D4}.p2	0.361	HOXA4 HOXD4
FEV.p2	0.333	FEV
AAUGCCC	0.318
ACAGUAU	0.306
TLX2.p2	0.299	TLX2
FOXN1.p2	0.299	FOXN1
CCUUCAU	0.263
MSX1,2.p2	0.259	MSX1 MSX2
ESR1.p2	0.235	ESR1
UAAUGCU	0.186
NFKB1_REL_RELA.p2	0.132	RELA REL NFKB1
GGAGUGU	0.132
GTF2I.p2	0.112	GTF2I
AUGACAC	0.108
VSX1,2.p2	0.103	VSX2 VSX1
AACCGUU	0.102
CGUACCG	0.078
GATA1..3.p2	0.063	GATA1 GATA2 GATA3
UCACAUU	0.057
AACCUGG	0.050
CDC5L.p2	0.037	CDC5L
CEBPA,B_DDIT3.p2	0.037	DDIT3 CEBPA CEBPB
RBPJ.p2	0.030	RBPJ
ACCCGUA	0.026
AACAGUC	0.014
GAGAACU	-0.050
GCUACAU	-0.057
NFE2.p2	-0.065	NFE2
ADNP_IRX_SIX_ZHX.p2	-0.085	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
POU5F1_SOX2{dimer}.p2	-0.096	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GGACGGA	-0.099
GZF1.p2	-0.114	GZF1
PDX1.p2	-0.130	PDX1
AUGUGCC	-0.144
GCUGGUG	-0.168
CUACAGU	-0.176
UGACCUA	-0.179
ACUGGCC	-0.179
ZBTB16.p2	-0.183	ZBTB16
PAX8.p2	-0.187	PAX8
AAUCUCA	-0.200
ACCCUGU	-0.201
PAX3,7.p2	-0.205	PAX7 PAX3
AUGGCAC	-0.222
NR6A1.p2	-0.269	NR6A1
CREB1.p2	-0.319	CREB1
AGCUUAU	-0.325
UUGGUCC	-0.360
UGUGCGU	-0.366
FOXO1,3,4.p2	-0.392	FOXO1 FOXO4 FOXO3
AUGGCUU	-0.393
NHLH1,2.p2	-0.393	NHLH1 NHLH2
ATF2.p2	-0.408	ATF2
HOXA9_MEIS1.p2	-0.412	MEIS1 HOXA9
FOX{C1,C2}.p2	-0.414	FOXC1 FOXC2
SOX2.p2	-0.432	SOX2
FOXL1.p2	-0.449	FOXL1
ACUGCAU	-0.476
GUAACAG	-0.480
UAUUGCU	-0.535
AAUCUCU	-0.536
PATZ1.p2	-0.571	PATZ1
GGCAAGA	-0.592
GAUCAGA	-0.599
SREBF1,2.p2	-0.619	SREBF1 SREBF2
EWSR1-FLI1.p2	-0.619	FLI1 EWSR1
MZF1.p2	-0.620	MZF1
STAT2,4,6.p2	-0.642	STAT2 STAT4 STAT6
AAGUGCU	-0.648
AAAGUGC	-0.654
UCACAGU	-0.670
HMX1.p2	-0.672	HMX1
GAUUGUC	-0.672
MYFfamily.p2	-0.673	MYOD1 MYF6 MYF5 MYOG
PAX6.p2	-0.676	PAX6
TCF4_dimer.p2	-0.688	TCF4
ACAGUAC	-0.690
UUGGCAC	-0.696
NKX3-2.p2	-0.704	NKX3-2
GGAAGAC	-0.719
T.p2	-0.763	T
AGCAGCA	-0.799
NFIL3.p2	-0.800	NFIL3
FOSL2.p2	-0.810	FOSL2
UAAGACG	-0.836
DBP.p2	-0.849	DBP
FOX{I1,J2}.p2	-0.869	FOXI1 FOXJ2
CUX2.p2	-0.928	CUX2
POU3F1..4.p2	-0.932	POU3F1 POU3F3 POU3F2 POU3F4
LHX3,4.p2	-0.935	LHX3 LHX4
STAT5{A,B}.p2	-0.960	STAT5B STAT5A
TFCP2.p2	-0.960	TFCP2
CGUGUCU	-0.975
ZFP161.p2	-0.985	ZFP161
ZIC1..3.p2	-1.002	ZIC1 ZIC2 ZIC3
NKX3-1.p2	-1.048	NKX3-1
FOXA2.p3	-1.056	FOXA2
FOX{F1,F2,J1}.p2	-1.079	FOXF2 FOXJ1 FOXF1
AGCAGCG	-1.083
UGCAUAG	-1.091
TLX1..3_NFIC{dimer}.p2	-1.094	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CCAGCAU	-1.124
PAX4.p2	-1.136	PAX4
GAGGUAG	-1.137
CRX.p2	-1.154	CRX
PPARG.p2	-1.162	PPARG
EOMES.p2	-1.165	EOMES
TFEB.p2	-1.172	TFEB
AR.p2	-1.179	AR
EGR1..3.p2	-1.183	EGR3 EGR1 EGR2
ACAUUCA	-1.189
UAAGACU	-1.227
FOX{D1,D2}.p2	-1.231	FOXD2 FOXD1
TAL1_TCF{3,4,12}.p2	-1.238	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
ALX1.p2	-1.250	ALX1
ZNF423.p2	-1.314	ZNF423
SOX5.p2	-1.343	SOX5
STAT1,3.p3	-1.348	STAT1 STAT3
GTF2A1,2.p2	-1.366	GTF2A1 GTF2A2
GAGAUGA	-1.382
NKX2-3_NKX2-5.p2	-1.407	NKX2-5 NKX2-3
RORA.p2	-1.410	RORA
NR3C1.p2	-1.448	NR3C1
UGCAUUG	-1.461
MAZ.p2	-1.476	MAZ
CACAGUG	-1.483
HIC1.p2	-1.491	HIC1
NFIX.p2	-1.494	NFIX
RXRA_VDR{dimer}.p2	-1.494	VDR	$logo of RXRA_VDR{dimer}.p2$
SPZ1.p2	-1.500	SPZ1
UCCCUUU	-1.534
AIRE.p2	-1.554	AIRE
IKZF1.p2	-1.631	IKZF1
CAGCAGG	-1.636
SPI1.p2	-1.667	SPI1
HOX{A5,B5}.p2	-1.674	HOXB5 HOXA5
NR5A1,2.p2	-1.694	NR5A1 NR5A2
AGCUGCC	-1.695
NR4A2.p2	-1.699	NR4A2
HNF1A.p2	-1.735	HNF1A
POU1F1.p2	-1.754	POU1F1
DMAP1_NCOR{1,2}_SMARC.p2	-1.767	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GATA6.p2	-1.826	GATA6
HLF.p2	-1.894	HLF
NR1H4.p2	-1.902	NR1H4
GLI1..3.p2	-1.954	GLI1 GLI2 GLI3
POU5F1.p2	-2.079	POU5F1
TBP.p2	-2.144	TBP
NANOG.p2	-2.187	NANOG
SRY.p2	-2.214	SRY
FOXP3.p2	-2.225	FOXP3
NKX2-1,4.p2	-2.245	NKX2-1 NKX2-4
JUN.p2	-2.321	JUN JUND JUNB
EVI1.p2	-2.332	EVI1
GGCUCAG	-2.348
ETS1,2.p2	-2.357	ETS2 ETS1
UGUGCUU	-2.365
TBX4,5.p2	-2.418	TBX5 TBX4
IRF1,2,7.p3	-2.553	IRF1 IRF2 IRF7
HAND1,2.p2	-2.656	HAND1 HAND2
ZEB1.p2	-2.727	ZEB1
EN1,2.p2	-2.823	EN1 EN2
LMO2.p2	-2.866	LMO2
GGCAGUG	-2.944
MTF1.p2	-3.033	MTF1
REST.p3	-3.078	REST
PAX2.p2	-3.115	PAX2
NANOG{mouse}.p2	-3.197	NANOG
RUNX1..3.p2	-3.307	RUNX1 RUNX3 RUNX2
RFX1..5_RFXANK_RFXAP.p2	-3.348	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
PITX1..3.p2	-3.371	PITX2 PITX3 PITX1
MEF2{A,B,C,D}.p2	-3.445	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
KLF12.p2	-3.466	KLF12
EBF1.p2	-3.755	EBF1
RREB1.p2	-3.787	RREB1
CCCUGAG	-3.967
TGIF1.p2	-4.048	TGIF1
SMAD1..7,9.p2	-4.348	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HNF4A_NR2F1,2.p2	-4.674	NR2F1 NR2F2 HNF4A
POU2F1..3.p2	-4.710	POU2F2 POU2F1 POU2F3
UUUUUGC	-4.914
SNAI1..3.p2	-4.980	SNAI2 SNAI1 SNAI3
MYOD1.p2	-5.710	MYOD1
CUCCCAA	-7.756

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Sample name: NCI60_1_HS578T

Sorted z-values for every WM.