ISMARA results: NCI60_1_IGROV1

Sample name: NCI60_1_IGROV1_rep2

Sorted Z-values histogram for the sample NCI60_1_IGROV1_rep2

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	9.661	YY1
NRF1.p2	9.165	NRF1
E2F1..5.p2	8.331	E2F4 E2F5 E2F2 E2F1 E2F3
ZNF143.p2	7.091	ZNF143
bHLH_family.p2	6.422	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NFY{A,B,C}.p2	5.389	NFYC NFYB NFYA
TFDP1.p2	4.816	TFDP1
ELF1,2,4.p2	4.801	ELF2 ELF1 ELF4
EHF.p2	4.357	EHF
MYB.p2	4.188	MYB
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.893	ARNT MAX MYC USF1 BHLHB2 ARNT2
FOXD3.p2	3.819	FOXD3
AHR_ARNT_ARNT2.p2	3.818	ARNT AHR ARNT2
SOX17.p2	3.692	SOX17
GGAAUGU	3.612
PAX5.p2	3.498	PAX5
UCACAUU	3.067
TFAP2B.p2	2.882	TFAP2B
ELK1,4_GABP{A,B1}.p3	2.831	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ATF5_CREB3.p2	2.688	ATF5 CREB3
EP300.p2	2.594	EP300
UCCAGUU	2.583
XBP1.p3	2.579	XBP1
NKX3-1.p2	2.528	NKX3-1
PATZ1.p2	2.466	PATZ1
KLF4.p3	2.307	KLF4
AGUGGUU	2.281
BPTF.p2	2.141	BPTF
PITX1..3.p2	2.123	PITX2 PITX3 PITX1
ZNF148.p2	2.035	ZNF148
CREB1.p2	2.021	CREB1
SOX{8,9,10}.p2	1.955	SOX9 SOX8 SOX10
NR4A2.p2	1.824	NR4A2
ATF4.p2	1.750	ATF4
GCAGCAU	1.717
CRX.p2	1.683	CRX
BACH2.p2	1.665	BACH2
FOXA2.p3	1.592	FOXA2
HIF1A.p2	1.591	HIF1A
ZIC1..3.p2	1.582	ZIC1 ZIC2 ZIC3
CCUUCAU	1.493
GUAACAG	1.486
LMO2.p2	1.462	LMO2
MSX1,2.p2	1.430	MSX1 MSX2
UCAAGUA	1.396
UUGGCAA	1.322
NFE2.p2	1.321	NFE2
AACGGAA	1.320
ACAGUAC	1.285
RXRG_dimer.p3	1.282	NR1H2 RXRA PPARG PPARA RXRB RXRG
SRF.p3	1.268	SRF
SOX5.p2	1.267	SOX5
UGAAAUG	1.219
GGAGUGU	1.143
FOXN1.p2	1.138	FOXN1
ESRRA.p2	1.120	ESRRA
CUUUGGU	1.100
ACAGUAU	1.085
HES1.p2	1.056	HES1
GAUUGUC	1.037
UCACAGU	0.975
SOX2.p2	0.961	SOX2
UUGGUCC	0.955
AGCACCA	0.862
NFE2L1.p2	0.851	NFE2L1
GFI1.p2	0.848	GFI1
NFE2L2.p2	0.845	NFE2L2
CAGUGCA	0.831
LEF1_TCF7_TCF7L1,2.p2	0.789	TCF7 TCF7L2 LEF1 TCF7L1
CTCF.p2	0.764	CTCF
TFAP4.p2	0.729	TFAP4
PBX1.p2	0.672	PBX1
AGCAGCA	0.625
UAAUGCU	0.605
ARID5B.p2	0.583	ARID5B
TP53.p2	0.568	TP53
FOXQ1.p2	0.564	FOXQ1
NKX2-2,8.p2	0.563	NKX2-2 NKX2-8
HSF1,2.p2	0.554	HSF1 HSF2
IKZF1.p2	0.545	IKZF1
CCAGUGU	0.507
AGGUAGU	0.448
ADNP_IRX_SIX_ZHX.p2	0.447	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
POU3F1..4.p2	0.435	POU3F1 POU3F3 POU3F2 POU3F4
LHX3,4.p2	0.420	LHX3 LHX4
ZEB1.p2	0.417	ZEB1
AACAGUC	0.383
T.p2	0.360	T
AACCUGG	0.317
AAUGCCC	0.289
ZNF384.p2	0.269	ZNF384
AAGGCAC	0.252
PRRX1,2.p2	0.232	PRRX2 PRRX1
ACCCUGU	0.223
AACCGUU	0.209
HOX{A6,A7,B6,B7}.p2	0.194	HOXB6 HOXA7 HOXB7 HOXA6
STAT5{A,B}.p2	0.162	STAT5B STAT5A
ACAUUCA	0.152
VSX1,2.p2	0.148	VSX2 VSX1
EBF1.p2	0.147	EBF1
AAUCUCA	0.100
HLF.p2	0.092	HLF
CGUACCG	0.091
FOS_FOS{B,L1}_JUN{B,D}.p2	0.087	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ACCCGUA	0.080
GZF1.p2	0.078	GZF1
AACACUG	0.075
AUGUGCC	0.069
PRDM1.p3	0.065	PRDM1
TFAP2{A,C}.p2	0.060	TFAP2C TFAP2A
GAUAUGU	0.039
PAX3,7.p2	0.034	PAX7 PAX3
ACUGCAU	0.033
AGCAGCG	0.032
HMGA1,2.p2	0.028	HMGA1 HMGA2
UGACCUA	0.019
GUGCAAA	0.010
TLX2.p2	-0.021	TLX2
AGCUGCC	-0.040
GGACGGA	-0.044
SPI1.p2	-0.068	SPI1
DMAP1_NCOR{1,2}_SMARC.p2	-0.068	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GUAGUGU	-0.080
FOXO1,3,4.p2	-0.112	FOXO1 FOXO4 FOXO3
ATF2.p2	-0.143	ATF2
ZNF238.p2	-0.154	ZNF238
AAUCUCU	-0.157
PAX6.p2	-0.171	PAX6
AR.p2	-0.179	AR
GUCAGUU	-0.184
TBX4,5.p2	-0.196	TBX5 TBX4
EOMES.p2	-0.222	EOMES
UGUGCGU	-0.234
PAX8.p2	-0.236	PAX8
TEAD1.p2	-0.236	TEAD1 TEAD2 TEAD3 TEAD4
CUACAGU	-0.266
GCUACAU	-0.270
AUGGCAC	-0.270
HOXA9_MEIS1.p2	-0.296	MEIS1 HOXA9
AUUGCAC	-0.305
AGCUUAU	-0.318
GAGGUAG	-0.318
GFI1B.p2	-0.322	GFI1B
ESR1.p2	-0.330	ESR1
CDX1,2,4.p2	-0.341	CDX1 CDX2 CDX4
MZF1.p2	-0.356	MZF1
GCUGGUG	-0.356
ACUGGCC	-0.360
UUGUUCG	-0.387
GUAAACA	-0.390
PPARG.p2	-0.395	PPARG
UGCAUUG	-0.395
NKX6-1,2.p2	-0.419	NKX6-1 NKX6-2
HOX{A4,D4}.p2	-0.421	HOXA4 HOXD4
NR5A1,2.p2	-0.450	NR5A1 NR5A2
AAUACUG	-0.459
RORA.p2	-0.461	RORA
POU6F1.p2	-0.469	POU6F1
ZFP161.p2	-0.509	ZFP161
CUX2.p2	-0.509	CUX2
UGCAUAG	-0.565
IKZF2.p2	-0.574	IKZF2
ZBTB16.p2	-0.576	ZBTB16
UAUUGCU	-0.580
CGUGUCU	-0.639
PDX1.p2	-0.678	PDX1
GAUCAGA	-0.679
GGCAAGA	-0.703
AAGGUGC	-0.721
MAFB.p2	-0.744	MAFB
EWSR1-FLI1.p2	-0.745	FLI1 EWSR1
AUGACAC	-0.754
UAAGACG	-0.764
TBP.p2	-0.769	TBP
ATF6.p2	-0.771	ATF6
RBPJ.p2	-0.781	RBPJ
SPZ1.p2	-0.785	SPZ1
RXR{A,B,G}.p2	-0.832	RXRA RXRB RXRG
FOXL1.p2	-0.856	FOXL1
NKX3-2.p2	-0.876	NKX3-2
UAAGACU	-0.887
NKX2-1,4.p2	-0.933	NKX2-1 NKX2-4
STAT1,3.p3	-0.945	STAT1 STAT3
NR6A1.p2	-0.971	NR6A1
UUGGCAC	-0.994
HNF1A.p2	-1.031	HNF1A
SPIB.p2	-1.037	SPIB
CCCUGAG	-1.048
MYBL2.p2	-1.058	MYBL2
HMX1.p2	-1.077	HMX1
NKX2-3_NKX2-5.p2	-1.089	NKX2-5 NKX2-3
ALX1.p2	-1.092	ALX1
TLX1..3_NFIC{dimer}.p2	-1.106	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CDC5L.p2	-1.177	CDC5L
MEF2{A,B,C,D}.p2	-1.212	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
AIRE.p2	-1.249	AIRE
AAGUGCU	-1.312
SRY.p2	-1.320	SRY
GAGAACU	-1.342
CCAGCAU	-1.348
ZBTB6.p2	-1.380	ZBTB6
MAZ.p2	-1.405	MAZ
CACAGUG	-1.413
STAT2,4,6.p2	-1.419	STAT2 STAT4 STAT6
ZNF423.p2	-1.423	ZNF423
NFIL3.p2	-1.452	NFIL3
NANOG{mouse}.p2	-1.475	NANOG
NFATC1..3.p2	-1.542	NFATC3 NFATC2 NFATC1
GTF2I.p2	-1.543	GTF2I
POU1F1.p2	-1.547	POU1F1
NFIX.p2	-1.582	NFIX
POU5F1_SOX2{dimer}.p2	-1.613	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
SREBF1,2.p2	-1.639	SREBF1 SREBF2
ETS1,2.p2	-1.654	ETS2 ETS1
EVI1.p2	-1.662	EVI1
NFKB1_REL_RELA.p2	-1.670	RELA REL NFKB1
POU5F1.p2	-1.681	POU5F1
PAX4.p2	-1.724	PAX4
GATA6.p2	-1.731	GATA6
NANOG.p2	-1.748	NANOG
RXRA_VDR{dimer}.p2	-1.759	VDR	$logo of RXRA_VDR{dimer}.p2$
REST.p3	-1.766	REST
GAGAUGA	-1.776
DBP.p2	-1.781	DBP
CEBPA,B_DDIT3.p2	-1.803	DDIT3 CEBPA CEBPB
FOXP3.p2	-1.814	FOXP3
HNF4A_NR2F1,2.p2	-1.855	NR2F1 NR2F2 HNF4A
POU2F1..3.p2	-1.928	POU2F2 POU2F1 POU2F3
UCCCUUU	-1.970
ONECUT1,2.p2	-1.977	ONECUT2 ONECUT1
TFEB.p2	-2.028	TFEB
EN1,2.p2	-2.032	EN1 EN2
FOX{I1,J2}.p2	-2.046	FOXI1 FOXJ2
FEV.p2	-2.067	FEV
NR3C1.p2	-2.076	NR3C1
JUN.p2	-2.084	JUN JUND JUNB
MTF1.p2	-2.085	MTF1
TCF4_dimer.p2	-2.102	TCF4
FOX{C1,C2}.p2	-2.113	FOXC1 FOXC2
AUGGCUU	-2.133
GGCAGUG	-2.167
GTF2A1,2.p2	-2.174	GTF2A1 GTF2A2
GATA1..3.p2	-2.219	GATA1 GATA2 GATA3
NHLH1,2.p2	-2.309	NHLH1 NHLH2
CAGCAGG	-2.315
FOSL2.p2	-2.335	FOSL2
FOX{D1,D2}.p2	-2.359	FOXD2 FOXD1
UGUGCUU	-2.361
TFCP2.p2	-2.392	TFCP2
HOX{A5,B5}.p2	-2.400	HOXB5 HOXA5
GGAAGAC	-2.453
RFX1..5_RFXANK_RFXAP.p2	-2.534	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
GLI1..3.p2	-2.601	GLI1 GLI2 GLI3
FOX{F1,F2,J1}.p2	-2.641	FOXF2 FOXJ1 FOXF1
TAL1_TCF{3,4,12}.p2	-2.660	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
HBP1_HMGB_SSRP1_UBTF.p2	-2.668	HMGB2 HMGB3 SSRP1 UBTF HBP1
IRF1,2,7.p3	-2.716	IRF1 IRF2 IRF7
PAX2.p2	-2.793	PAX2
SP1.p2	-2.800	SP1
AGUGCAA	-2.825
SNAI1..3.p2	-2.879	SNAI2 SNAI1 SNAI3
MYFfamily.p2	-2.968	MYOD1 MYF6 MYF5 MYOG
NR1H4.p2	-3.062	NR1H4
RREB1.p2	-3.086	RREB1
TGIF1.p2	-3.117	TGIF1
HAND1,2.p2	-3.324	HAND1 HAND2
GGCUCAG	-3.459
MYOD1.p2	-3.498	MYOD1
UUUUUGC	-3.600
EGR1..3.p2	-3.832	EGR3 EGR1 EGR2
AAAGUGC	-3.847
RUNX1..3.p2	-3.935	RUNX1 RUNX3 RUNX2
SMAD1..7,9.p2	-4.305	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HIC1.p2	-4.604	HIC1
KLF12.p2	-4.845	KLF12
CUCCCAA	-5.756

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Sample name: NCI60_1_IGROV1_rep2

Sorted z-values for every WM.