ISMARA results: NCI60_1

Sample name: NCI60_1_K-562

Sorted Z-values histogram for the sample NCI60_1_K-562

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
E2F1..5.p2	12.932	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	12.575	YY1
ELK1,4_GABP{A,B1}.p3	11.579	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NRF1.p2	10.032	NRF1
ZNF143.p2	9.557	ZNF143
MYB.p2	8.087	MYB
NFY{A,B,C}.p2	7.738	NFYC NFYB NFYA
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	7.449	ARNT MAX MYC USF1 BHLHB2 ARNT2
TFDP1.p2	7.245	TFDP1
EHF.p2	5.061	EHF
HES1.p2	5.058	HES1
ATF4.p2	4.539	ATF4
UCAAGUA	4.077
ATF5_CREB3.p2	3.936	ATF5 CREB3
ELF1,2,4.p2	3.351	ELF2 ELF1 ELF4
HIF1A.p2	3.305	HIF1A
ESRRA.p2	3.099	ESRRA
bHLH_family.p2	3.080	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
AHR_ARNT_ARNT2.p2	2.753	ARNT AHR ARNT2
PITX1..3.p2	2.650	PITX2 PITX3 PITX1
BACH2.p2	2.300	BACH2
MAFB.p2	2.273	MAFB
UCACAUU	2.231
GUAACAG	1.973
NFE2L2.p2	1.971	NFE2L2
FOXN1.p2	1.953	FOXN1
ZBTB16.p2	1.729	ZBTB16
SPIB.p2	1.726	SPIB
NKX2-2,8.p2	1.684	NKX2-2 NKX2-8
CTCF.p2	1.643	CTCF
KLF4.p3	1.628	KLF4
FOXQ1.p2	1.617	FOXQ1
BPTF.p2	1.595	BPTF
CDX1,2,4.p2	1.588	CDX1 CDX2 CDX4
PBX1.p2	1.527	PBX1
CREB1.p2	1.500	CREB1
AGUGGUU	1.427
GGAAUGU	1.323
GAUUGUC	1.302
TP53.p2	1.268	TP53
RXRG_dimer.p3	1.168	NR1H2 RXRA PPARG PPARA RXRB RXRG
AUGGCAC	1.142
HMGA1,2.p2	1.130	HMGA1 HMGA2
AGGUAGU	1.119
PATZ1.p2	1.117	PATZ1
GATA6.p2	0.994	GATA6
TFAP2B.p2	0.937	TFAP2B
UCACAGU	0.930
ADNP_IRX_SIX_ZHX.p2	0.894	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
HOX{A4,D4}.p2	0.893	HOXA4 HOXD4
CAGUGCA	0.871
NFE2.p2	0.843	NFE2
SOX{8,9,10}.p2	0.835	SOX9 SOX8 SOX10
POU2F1..3.p2	0.791	POU2F2 POU2F1 POU2F3
AGCUGCC	0.771
SOX2.p2	0.730	SOX2
GAGGUAG	0.724
ZNF384.p2	0.689	ZNF384
SPZ1.p2	0.679	SPZ1
XBP1.p3	0.643	XBP1
SP1.p2	0.631	SP1
SOX5.p2	0.621	SOX5
CUACAGU	0.605
AGCACCA	0.591
FOXD3.p2	0.571	FOXD3
AACACUG	0.467
ACAGUAC	0.458
AAGGCAC	0.444
GGAGUGU	0.441
GCUGGUG	0.437
AGCAGCA	0.411
PAX5.p2	0.364	PAX5
AGCAGCG	0.362
FOXA2.p3	0.350	FOXA2
UUGGCAA	0.307
GZF1.p2	0.305	GZF1
UAAUGCU	0.305
SOX17.p2	0.297	SOX17
AAUCUCA	0.275
POU3F1..4.p2	0.275	POU3F1 POU3F3 POU3F2 POU3F4
UGACCUA	0.274
NKX2-1,4.p2	0.250	NKX2-1 NKX2-4
GAUAUGU	0.249
RBPJ.p2	0.242	RBPJ
ARID5B.p2	0.225	ARID5B
ACUGCAU	0.199
GCUACAU	0.182
POU6F1.p2	0.154	POU6F1
AACCGUU	0.149
VSX1,2.p2	0.144	VSX2 VSX1
GUAAACA	0.143
CEBPA,B_DDIT3.p2	0.120	DDIT3 CEBPA CEBPB
GCAGCAU	0.115
ACAGUAU	0.107
ACCCGUA	0.106
HOXA9_MEIS1.p2	0.101	MEIS1 HOXA9
NANOG.p2	0.079	NANOG
UCCAGUU	0.077
UGCAUUG	0.057
CCUUCAU	0.056
NR5A1,2.p2	0.038	NR5A1 NR5A2
FOX{F1,F2,J1}.p2	0.034	FOXF2 FOXJ1 FOXF1
ACUGGCC	0.031
CUX2.p2	-0.017	CUX2
PRRX1,2.p2	-0.035	PRRX2 PRRX1
AACGGAA	-0.041
AGCUUAU	-0.052
SPI1.p2	-0.070	SPI1
AAUACUG	-0.079
UGUGCGU	-0.086
CDC5L.p2	-0.094	CDC5L
T.p2	-0.105	T
CRX.p2	-0.112	CRX
AUGUGCC	-0.122
GGACGGA	-0.140
AUGACAC	-0.165
PAX8.p2	-0.178	PAX8
CCCUGAG	-0.180
UAAGACG	-0.180
ONECUT1,2.p2	-0.198	ONECUT2 ONECUT1
AACAGUC	-0.226
NKX3-1.p2	-0.230	NKX3-1
GFI1.p2	-0.253	GFI1
HMX1.p2	-0.265	HMX1
AGUGCAA	-0.270
PAX3,7.p2	-0.272	PAX7 PAX3
RUNX1..3.p2	-0.279	RUNX1 RUNX3 RUNX2
NKX3-2.p2	-0.303	NKX3-2
EP300.p2	-0.312	EP300
NFIL3.p2	-0.363	NFIL3
DMAP1_NCOR{1,2}_SMARC.p2	-0.365	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ACAUUCA	-0.366
AUGGCUU	-0.366
PAX4.p2	-0.392	PAX4
UUGGUCC	-0.399
NFE2L1.p2	-0.415	NFE2L1
PPARG.p2	-0.415	PPARG
HLF.p2	-0.430	HLF
ACCCUGU	-0.433
ZNF148.p2	-0.445	ZNF148
AAUGCCC	-0.447
GLI1..3.p2	-0.450	GLI1 GLI2 GLI3
UAUUGCU	-0.454
AAUCUCU	-0.481
ZEB1.p2	-0.483	ZEB1
AACCUGG	-0.503
RXR{A,B,G}.p2	-0.523	RXRA RXRB RXRG
ZFP161.p2	-0.525	ZFP161
AIRE.p2	-0.529	AIRE
NR1H4.p2	-0.539	NR1H4
CUUUGGU	-0.544
UGAAAUG	-0.575
GGCAAGA	-0.610
CGUGUCU	-0.618
UAAGACU	-0.634
LMO2.p2	-0.697	LMO2
PAX6.p2	-0.716	PAX6
CGUACCG	-0.749
SREBF1,2.p2	-0.750	SREBF1 SREBF2
EOMES.p2	-0.765	EOMES
RORA.p2	-0.766	RORA
STAT5{A,B}.p2	-0.772	STAT5B STAT5A
FOXO1,3,4.p2	-0.780	FOXO1 FOXO4 FOXO3
UCCCUUU	-0.789
TFAP4.p2	-0.808	TFAP4
GUCAGUU	-0.814
ATF2.p2	-0.865	ATF2
GFI1B.p2	-0.870	GFI1B
ZBTB6.p2	-0.891	ZBTB6
EWSR1-FLI1.p2	-0.892	FLI1 EWSR1
IKZF2.p2	-0.906	IKZF2
PDX1.p2	-0.913	PDX1
RXRA_VDR{dimer}.p2	-0.922	VDR	$logo of RXRA_VDR{dimer}.p2$
FOXL1.p2	-0.955	FOXL1
NKX2-3_NKX2-5.p2	-0.956	NKX2-5 NKX2-3
SRY.p2	-0.986	SRY
GAUCAGA	-0.998
MYBL2.p2	-1.001	MYBL2
HOX{A6,A7,B6,B7}.p2	-1.013	HOXB6 HOXA7 HOXB7 HOXA6
NR6A1.p2	-1.022	NR6A1
ZNF423.p2	-1.025	ZNF423
ZNF238.p2	-1.084	ZNF238
UGUGCUU	-1.106
CCAGUGU	-1.115
UUGGCAC	-1.124
TFAP2{A,C}.p2	-1.161	TFAP2C TFAP2A
UUGUUCG	-1.183
MSX1,2.p2	-1.228	MSX1 MSX2
LHX3,4.p2	-1.247	LHX3 LHX4
AR.p2	-1.261	AR
GUAGUGU	-1.279
AAGGUGC	-1.334
AAGUGCU	-1.404
NKX6-1,2.p2	-1.409	NKX6-1 NKX6-2
IKZF1.p2	-1.419	IKZF1
GAGAACU	-1.422
STAT2,4,6.p2	-1.427	STAT2 STAT4 STAT6
NFATC1..3.p2	-1.444	NFATC3 NFATC2 NFATC1
NR4A2.p2	-1.462	NR4A2
FOX{I1,J2}.p2	-1.485	FOXI1 FOXJ2
TLX2.p2	-1.513	TLX2
GGAAGAC	-1.525
LEF1_TCF7_TCF7L1,2.p2	-1.544	TCF7 TCF7L2 LEF1 TCF7L1
CCAGCAU	-1.551
POU5F1_SOX2{dimer}.p2	-1.554	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NR3C1.p2	-1.558	NR3C1
CACAGUG	-1.620
PAX2.p2	-1.642	PAX2
UUUUUGC	-1.661
EGR1..3.p2	-1.669	EGR3 EGR1 EGR2
TAL1_TCF{3,4,12}.p2	-1.676	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGCAUAG	-1.685
MEF2{A,B,C,D}.p2	-1.688	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
DBP.p2	-1.691	DBP
TCF4_dimer.p2	-1.696	TCF4
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.699	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GAGAUGA	-1.701
GTF2I.p2	-1.830	GTF2I
ATF6.p2	-1.890	ATF6
EBF1.p2	-1.960	EBF1
HNF1A.p2	-1.985	HNF1A
FEV.p2	-2.021	FEV
POU1F1.p2	-2.044	POU1F1
RREB1.p2	-2.063	RREB1
STAT1,3.p3	-2.081	STAT1 STAT3
TEAD1.p2	-2.190	TEAD1 TEAD2 TEAD3 TEAD4
HSF1,2.p2	-2.208	HSF1 HSF2
AUUGCAC	-2.253
FOX{C1,C2}.p2	-2.257	FOXC1 FOXC2
ALX1.p2	-2.288	ALX1
EN1,2.p2	-2.300	EN1 EN2
ESR1.p2	-2.308	ESR1
PRDM1.p3	-2.393	PRDM1
MYOD1.p2	-2.404	MYOD1
FOX{D1,D2}.p2	-2.635	FOXD2 FOXD1
POU5F1.p2	-2.657	POU5F1
FOSL2.p2	-2.682	FOSL2
NANOG{mouse}.p2	-2.694	NANOG
MAZ.p2	-2.712	MAZ
GGCUCAG	-2.750
SNAI1..3.p2	-2.804	SNAI2 SNAI1 SNAI3
SRF.p3	-2.820	SRF
NFIX.p2	-2.836	NFIX
ZIC1..3.p2	-2.845	ZIC1 ZIC2 ZIC3
EVI1.p2	-2.933	EVI1
JUN.p2	-2.941	JUN JUND JUNB
RFX1..5_RFXANK_RFXAP.p2	-3.020	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
FOXP3.p2	-3.048	FOXP3
HOX{A5,B5}.p2	-3.117	HOXB5 HOXA5
NFKB1_REL_RELA.p2	-3.157	RELA REL NFKB1
GATA1..3.p2	-3.211	GATA1 GATA2 GATA3
HNF4A_NR2F1,2.p2	-3.304	NR2F1 NR2F2 HNF4A
GUGCAAA	-3.318
TGIF1.p2	-3.367	TGIF1
HBP1_HMGB_SSRP1_UBTF.p2	-3.403	HMGB2 HMGB3 SSRP1 UBTF HBP1
GGCAGUG	-3.419
ETS1,2.p2	-3.429	ETS2 ETS1
NHLH1,2.p2	-3.501	NHLH1 NHLH2
HAND1,2.p2	-3.665	HAND1 HAND2
REST.p3	-3.673	REST
CAGCAGG	-3.721
MZF1.p2	-3.732	MZF1
GTF2A1,2.p2	-3.796	GTF2A1 GTF2A2
TLX1..3_NFIC{dimer}.p2	-3.848	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CUCCCAA	-3.932
IRF1,2,7.p3	-4.417	IRF1 IRF2 IRF7
TBP.p2	-4.497	TBP
TFEB.p2	-4.519	TFEB
KLF12.p2	-4.535	KLF12
TBX4,5.p2	-4.751	TBX5 TBX4
SMAD1..7,9.p2	-5.307	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AAAGUGC	-5.356
TFCP2.p2	-5.710	TFCP2
HIC1.p2	-6.168	HIC1
MYFfamily.p2	-6.749	MYOD1 MYF6 MYF5 MYOG
MTF1.p2	-6.884	MTF1

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Sample name: NCI60_1_K-562

Sorted z-values for every WM.