ISMARA results: NCI60_1

Sample name: NCI60_1_MCF7

Sorted Z-values histogram for the sample NCI60_1_MCF7

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	13.347	YY1
NRF1.p2	12.098	NRF1
NFY{A,B,C}.p2	9.756	NFYC NFYB NFYA
E2F1..5.p2	9.094	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	8.128	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ZNF143.p2	7.480	ZNF143
MYB.p2	6.977	MYB
EHF.p2	6.772	EHF
ELF1,2,4.p2	5.833	ELF2 ELF1 ELF4
bHLH_family.p2	5.255	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
TFDP1.p2	5.052	TFDP1
SP1.p2	4.296	SP1
SNAI1..3.p2	4.235	SNAI2 SNAI1 SNAI3
ATF5_CREB3.p2	3.949	ATF5 CREB3
NFE2L2.p2	3.741	NFE2L2
PITX1..3.p2	3.689	PITX2 PITX3 PITX1
BPTF.p2	3.649	BPTF
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.599	ARNT MAX MYC USF1 BHLHB2 ARNT2
HIF1A.p2	3.583	HIF1A
GFI1.p2	3.260	GFI1
GGAAUGU	2.767
HES1.p2	2.626	HES1
PATZ1.p2	2.604	PATZ1
IKZF1.p2	2.491	IKZF1
RBPJ.p2	2.257	RBPJ
FOXD3.p2	2.186	FOXD3
HOX{A4,D4}.p2	2.032	HOXA4 HOXD4
NFE2L1.p2	1.982	NFE2L1
UCAAGUA	1.954
UCCAGUU	1.919
ESRRA.p2	1.814	ESRRA
NKX3-1.p2	1.709	NKX3-1
FOXN1.p2	1.629	FOXN1
PBX1.p2	1.600	PBX1
GUAGUGU	1.442
SREBF1,2.p2	1.425	SREBF1 SREBF2
ACAGUAC	1.414
ADNP_IRX_SIX_ZHX.p2	1.412	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
EP300.p2	1.344	EP300
XBP1.p3	1.279	XBP1
GGAGUGU	1.255
TFAP2B.p2	1.223	TFAP2B
ZBTB16.p2	1.223	ZBTB16
CREB1.p2	1.198	CREB1
CTCF.p2	1.149	CTCF
GCUGGUG	1.145
TP53.p2	1.134	TP53
AGCACCA	1.105
BACH2.p2	1.068	BACH2
ONECUT1,2.p2	1.041	ONECUT2 ONECUT1
NKX2-2,8.p2	1.012	NKX2-2 NKX2-8
HMX1.p2	0.947	HMX1
AGCUGCC	0.902
ZEB1.p2	0.890	ZEB1
GUAACAG	0.890
GCUACAU	0.818
ATF4.p2	0.788	ATF4
GUGCAAA	0.725
AGUGGUU	0.708
UCACAUU	0.662
UUGGUCC	0.654
ZBTB6.p2	0.623	ZBTB6
PRRX1,2.p2	0.541	PRRX2 PRRX1
HLF.p2	0.489	HLF
GAUUGUC	0.476
ARID5B.p2	0.421	ARID5B
SPIB.p2	0.406	SPIB
CCUUCAU	0.372
SOX{8,9,10}.p2	0.363	SOX9 SOX8 SOX10
ACUGCAU	0.344
RXRG_dimer.p3	0.331	NR1H2 RXRA PPARG PPARA RXRB RXRG
LMO2.p2	0.320	LMO2
FOXQ1.p2	0.320	FOXQ1
SOX5.p2	0.292	SOX5
UGCAUUG	0.281
GGACGGA	0.231
GAUAUGU	0.231
NR4A2.p2	0.224	NR4A2
CCCUGAG	0.218
AAUGCCC	0.208
AGCAGCG	0.207
POU3F1..4.p2	0.186	POU3F1 POU3F3 POU3F2 POU3F4
AGCAGCA	0.180
SPI1.p2	0.154	SPI1
AHR_ARNT_ARNT2.p2	0.148	ARNT AHR ARNT2
PAX3,7.p2	0.124	PAX7 PAX3
AGCUUAU	0.121
LEF1_TCF7_TCF7L1,2.p2	0.113	TCF7 TCF7L2 LEF1 TCF7L1
ACCCGUA	0.103
AACCUGG	0.100
ZNF148.p2	0.098	ZNF148
VSX1,2.p2	0.068	VSX2 VSX1
RORA.p2	0.061	RORA
ACUGGCC	0.056
CUACAGU	0.054
CAGUGCA	0.049
ZNF384.p2	0.042	ZNF384
CRX.p2	0.040	CRX
ESR1.p2	0.036	ESR1
AACCGUU	0.026
SOX2.p2	0.004	SOX2
AAUCUCU	-0.002
AUGGCAC	-0.007
UUGGCAC	-0.031
GLI1..3.p2	-0.057	GLI1 GLI2 GLI3
AIRE.p2	-0.064	AIRE
GGCAAGA	-0.070
HOXA9_MEIS1.p2	-0.073	MEIS1 HOXA9
FOXA2.p3	-0.086	FOXA2
ACCCUGU	-0.132
UGACCUA	-0.142
PAX8.p2	-0.147	PAX8
NR5A1,2.p2	-0.158	NR5A1 NR5A2
HNF4A_NR2F1,2.p2	-0.163	NR2F1 NR2F2 HNF4A
UUGGCAA	-0.167
UCACAGU	-0.168
AAGGUGC	-0.178
POU6F1.p2	-0.196	POU6F1
CCAGUGU	-0.197
CGUACCG	-0.198
UAAGACG	-0.241
AACGGAA	-0.243
PDX1.p2	-0.262	PDX1
STAT5{A,B}.p2	-0.272	STAT5B STAT5A
UGUGCGU	-0.280
SOX17.p2	-0.307	SOX17
UGAAAUG	-0.329
T.p2	-0.344	T
PAX5.p2	-0.350	PAX5
NKX2-1,4.p2	-0.369	NKX2-1 NKX2-4
GZF1.p2	-0.381	GZF1
AAUCUCA	-0.384
NANOG.p2	-0.386	NANOG
FOX{D1,D2}.p2	-0.387	FOXD2 FOXD1
CDC5L.p2	-0.394	CDC5L
CUUUGGU	-0.396
KLF4.p3	-0.406	KLF4
AUGACAC	-0.406
GFI1B.p2	-0.427	GFI1B
CAGCAGG	-0.467
PAX2.p2	-0.478	PAX2
CEBPA,B_DDIT3.p2	-0.504	DDIT3 CEBPA CEBPB
ACAGUAU	-0.515
ACAUUCA	-0.529
GUCAGUU	-0.543
FOX{I1,J2}.p2	-0.564	FOXI1 FOXJ2
PPARG.p2	-0.571	PPARG
NKX6-1,2.p2	-0.578	NKX6-1 NKX6-2
CACAGUG	-0.607
NKX3-2.p2	-0.615	NKX3-2
GAUCAGA	-0.649
AGGUAGU	-0.666
CDX1,2,4.p2	-0.677	CDX1 CDX2 CDX4
IKZF2.p2	-0.678	IKZF2
FOXL1.p2	-0.684	FOXL1
GAGAUGA	-0.689
AACAGUC	-0.693
UAUUGCU	-0.702
AUGUGCC	-0.728
UUGUUCG	-0.731
UGUGCUU	-0.737
UGCAUAG	-0.764
CGUGUCU	-0.769
PAX6.p2	-0.804	PAX6
EWSR1-FLI1.p2	-0.820	FLI1 EWSR1
LHX3,4.p2	-0.832	LHX3 LHX4
UAAGACU	-0.839
CUX2.p2	-0.839	CUX2
UAAUGCU	-0.873
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.883	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
RFX1..5_RFXANK_RFXAP.p2	-0.896	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
FOX{F1,F2,J1}.p2	-0.914	FOXF2 FOXJ1 FOXF1
EOMES.p2	-0.926	EOMES
EBF1.p2	-0.928	EBF1
AACACUG	-0.931
RXRA_VDR{dimer}.p2	-0.949	VDR	$logo of RXRA_VDR{dimer}.p2$
GGCAGUG	-0.977
HSF1,2.p2	-0.994	HSF1 HSF2
TFAP4.p2	-1.006	TFAP4
MYBL2.p2	-1.013	MYBL2
ALX1.p2	-1.065	ALX1
HOX{A6,A7,B6,B7}.p2	-1.082	HOXB6 HOXA7 HOXB7 HOXA6
NFIL3.p2	-1.091	NFIL3
EGR1..3.p2	-1.103	EGR3 EGR1 EGR2
MSX1,2.p2	-1.144	MSX1 MSX2
GAGAACU	-1.184
DMAP1_NCOR{1,2}_SMARC.p2	-1.186	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ATF2.p2	-1.195	ATF2
AAGUGCU	-1.209
GCAGCAU	-1.236
AAGGCAC	-1.266
AR.p2	-1.272	AR
NR6A1.p2	-1.295	NR6A1
TEAD1.p2	-1.309	TEAD1 TEAD2 TEAD3 TEAD4
GGCUCAG	-1.316
HMGA1,2.p2	-1.316	HMGA1 HMGA2
NFE2.p2	-1.341	NFE2
MAFB.p2	-1.350	MAFB
ZNF423.p2	-1.429	ZNF423
GGAAGAC	-1.443
RXR{A,B,G}.p2	-1.446	RXRA RXRB RXRG
KLF12.p2	-1.451	KLF12
NKX2-3_NKX2-5.p2	-1.480	NKX2-5 NKX2-3
MAZ.p2	-1.489	MAZ
FOXO1,3,4.p2	-1.533	FOXO1 FOXO4 FOXO3
AAUACUG	-1.541
CCAGCAU	-1.545
NHLH1,2.p2	-1.546	NHLH1 NHLH2
NFIX.p2	-1.586	NFIX
STAT2,4,6.p2	-1.604	STAT2 STAT4 STAT6
GUAAACA	-1.644
TAL1_TCF{3,4,12}.p2	-1.648	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
HOX{A5,B5}.p2	-1.653	HOXB5 HOXA5
POU5F1_SOX2{dimer}.p2	-1.657	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOX{C1,C2}.p2	-1.661	FOXC1 FOXC2
SRY.p2	-1.668	SRY
AUGGCUU	-1.684
ZFP161.p2	-1.685	ZFP161
EVI1.p2	-1.705	EVI1
DBP.p2	-1.705	DBP
AUUGCAC	-1.716
RREB1.p2	-1.730	RREB1
JUN.p2	-1.737	JUN JUND JUNB
HNF1A.p2	-1.747	HNF1A
FOXP3.p2	-1.758	FOXP3
AGUGCAA	-1.766
TFAP2{A,C}.p2	-1.767	TFAP2C TFAP2A
PAX4.p2	-1.785	PAX4
ZIC1..3.p2	-1.798	ZIC1 ZIC2 ZIC3
GTF2I.p2	-1.803	GTF2I
ZNF238.p2	-1.812	ZNF238
NR3C1.p2	-1.842	NR3C1
MEF2{A,B,C,D}.p2	-1.853	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HAND1,2.p2	-1.862	HAND1 HAND2
UCCCUUU	-1.873
SPZ1.p2	-1.943	SPZ1
FEV.p2	-1.980	FEV
MZF1.p2	-2.042	MZF1
REST.p3	-2.062	REST
HBP1_HMGB_SSRP1_UBTF.p2	-2.088	HMGB2 HMGB3 SSRP1 UBTF HBP1
GAGGUAG	-2.096
POU1F1.p2	-2.140	POU1F1
GTF2A1,2.p2	-2.205	GTF2A1 GTF2A2
FOSL2.p2	-2.224	FOSL2
MTF1.p2	-2.322	MTF1
EN1,2.p2	-2.394	EN1 EN2
GATA6.p2	-2.535	GATA6
PRDM1.p3	-2.549	PRDM1
TLX2.p2	-2.630	TLX2
POU2F1..3.p2	-2.647	POU2F2 POU2F1 POU2F3
ATF6.p2	-2.667	ATF6
STAT1,3.p3	-2.673	STAT1 STAT3
NANOG{mouse}.p2	-2.677	NANOG
SMAD1..7,9.p2	-2.687	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
NR1H4.p2	-2.704	NR1H4
MYFfamily.p2	-2.757	MYOD1 MYF6 MYF5 MYOG
RUNX1..3.p2	-2.885	RUNX1 RUNX3 RUNX2
IRF1,2,7.p3	-2.972	IRF1 IRF2 IRF7
NFATC1..3.p2	-3.164	NFATC3 NFATC2 NFATC1
TFCP2.p2	-3.233	TFCP2
POU5F1.p2	-3.279	POU5F1
TBX4,5.p2	-3.300	TBX5 TBX4
CUCCCAA	-3.380
TFEB.p2	-3.514	TFEB
AAAGUGC	-3.601
TBP.p2	-3.630	TBP
GATA1..3.p2	-3.654	GATA1 GATA2 GATA3
NFKB1_REL_RELA.p2	-3.812	RELA REL NFKB1
TCF4_dimer.p2	-3.851	TCF4
MYOD1.p2	-3.902	MYOD1
ETS1,2.p2	-3.929	ETS2 ETS1
UUUUUGC	-3.949
SRF.p3	-4.887	SRF
TGIF1.p2	-4.995	TGIF1
HIC1.p2	-5.084	HIC1
TLX1..3_NFIC{dimer}.p2	-5.384	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$

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Sample name: NCI60_1_MCF7

Sorted z-values for every WM.