ISMARA results: NCI60_1

Sample name: NCI60_1_NCI-H226

Sorted Z-values histogram for the sample NCI60_1_NCI-H226

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
IRF1,2,7.p3	6.822	IRF1 IRF2 IRF7
YY1.p2	5.814	YY1
ELF1,2,4.p2	5.382	ELF2 ELF1 ELF4
GGAAUGU	5.261
ELK1,4_GABP{A,B1}.p3	5.214	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
XBP1.p3	4.977	XBP1
TFDP1.p2	4.419	TFDP1
HIF1A.p2	4.368	HIF1A
EHF.p2	4.054	EHF
UCCAGUU	3.989
NRF1.p2	3.776	NRF1
TP53.p2	3.296	TP53
ATF5_CREB3.p2	3.220	ATF5 CREB3
STAT2,4,6.p2	3.213	STAT2 STAT4 STAT6
PAX5.p2	3.082	PAX5
KLF4.p3	3.045	KLF4
BACH2.p2	3.013	BACH2
MYB.p2	2.799	MYB
NFE2L1.p2	2.732	NFE2L1
ZNF143.p2	2.725	ZNF143
AAGGCAC	2.637
AGUGGUU	2.629
FOS_FOS{B,L1}_JUN{B,D}.p2	2.540	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GUGCAAA	2.485
AAUACUG	2.381
bHLH_family.p2	2.359	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ZBTB16.p2	2.347	ZBTB16
ATF4.p2	2.036	ATF4
NKX2-2,8.p2	2.031	NKX2-2 NKX2-8
NFY{A,B,C}.p2	2.030	NFYC NFYB NFYA
HOX{A6,A7,B6,B7}.p2	2.019	HOXB6 HOXA7 HOXB7 HOXA6
ZNF148.p2	2.018	ZNF148
UCAAGUA	2.010
ADNP_IRX_SIX_ZHX.p2	1.996	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.987	ARNT MAX MYC USF1 BHLHB2 ARNT2
AGCAGCA	1.980
TEAD1.p2	1.965	TEAD1 TEAD2 TEAD3 TEAD4
E2F1..5.p2	1.894	E2F4 E2F5 E2F2 E2F1 E2F3
GUAGUGU	1.863
FOXQ1.p2	1.860	FOXQ1
NFE2.p2	1.807	NFE2
FOXD3.p2	1.755	FOXD3
NFE2L2.p2	1.750	NFE2L2
TBP.p2	1.748	TBP
UCACAUU	1.743
ACAGUAU	1.719
PRDM1.p3	1.626	PRDM1
GCAGCAU	1.618
TFAP2B.p2	1.596	TFAP2B
AAUGCCC	1.590
DMAP1_NCOR{1,2}_SMARC.p2	1.531	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ESR1.p2	1.527	ESR1
MAFB.p2	1.476	MAFB
GFI1.p2	1.467	GFI1
EP300.p2	1.419	EP300
HSF1,2.p2	1.353	HSF1 HSF2
SOX{8,9,10}.p2	1.352	SOX9 SOX8 SOX10
FOXN1.p2	1.254	FOXN1
NR6A1.p2	1.170	NR6A1
AACGGAA	1.103
UUGGCAA	1.098
ACAGUAC	1.024
GUAACAG	1.013
RXRG_dimer.p3	1.003	NR1H2 RXRA PPARG PPARA RXRB RXRG
NFKB1_REL_RELA.p2	0.986	RELA REL NFKB1
CUUUGGU	0.971
CEBPA,B_DDIT3.p2	0.958	DDIT3 CEBPA CEBPB
CTCF.p2	0.937	CTCF
GUAAACA	0.930
MZF1.p2	0.924	MZF1
STAT5{A,B}.p2	0.922	STAT5B STAT5A
TFAP2{A,C}.p2	0.917	TFAP2C TFAP2A
SOX17.p2	0.857	SOX17
ZBTB6.p2	0.833	ZBTB6
UGCAUUG	0.791
ARID5B.p2	0.768	ARID5B
BPTF.p2	0.741	BPTF
NKX3-2.p2	0.708	NKX3-2
MYBL2.p2	0.698	MYBL2
AAGGUGC	0.652
AUUGCAC	0.649
HOX{A4,D4}.p2	0.639	HOXA4 HOXD4
RXR{A,B,G}.p2	0.624	RXRA RXRB RXRG
PBX1.p2	0.618	PBX1
GUCAGUU	0.592
UUGGUCC	0.592
AUGGCAC	0.559
AUGUGCC	0.554
GFI1B.p2	0.517	GFI1B
SRF.p3	0.513	SRF
SOX2.p2	0.512	SOX2
SPIB.p2	0.475	SPIB
AHR_ARNT_ARNT2.p2	0.460	ARNT AHR ARNT2
UCACAGU	0.447
ZNF384.p2	0.422	ZNF384
AACACUG	0.325
SPI1.p2	0.301	SPI1
AAGUGCU	0.290
CREB1.p2	0.285	CREB1
UAAUGCU	0.253
ATF2.p2	0.247	ATF2
CCUUCAU	0.201
CGUACCG	0.201
HES1.p2	0.200	HES1
NR5A1,2.p2	0.200	NR5A1 NR5A2
GAUAUGU	0.169
UGACCUA	0.158
SREBF1,2.p2	0.144	SREBF1 SREBF2
FOX{I1,J2}.p2	0.135	FOXI1 FOXJ2
POU6F1.p2	0.132	POU6F1
SP1.p2	0.121	SP1
AACCGUU	0.114
CUACAGU	0.100
EGR1..3.p2	0.061	EGR3 EGR1 EGR2
ACAUUCA	0.055
CCAGUGU	0.035
ACCCUGU	0.035
AACCUGG	0.029
GGCAAGA	0.016
UGAAAUG	0.013
PAX2.p2	0.009	PAX2
ACUGCAU	0.005
NANOG.p2	0.003	NANOG
GGAGUGU	0.001
TFAP4.p2	-0.010	TFAP4
ACCCGUA	-0.018
ESRRA.p2	-0.065	ESRRA
NFIX.p2	-0.075	NFIX
AUGACAC	-0.077
UGUGCGU	-0.095
TFEB.p2	-0.112	TFEB
VSX1,2.p2	-0.116	VSX2 VSX1
HMGA1,2.p2	-0.140	HMGA1 HMGA2
UAAGACG	-0.150
NFATC1..3.p2	-0.162	NFATC3 NFATC2 NFATC1
PAX3,7.p2	-0.163	PAX7 PAX3
GAUCAGA	-0.186
ATF6.p2	-0.199	ATF6
LHX3,4.p2	-0.207	LHX3 LHX4
PAX8.p2	-0.263	PAX8
PRRX1,2.p2	-0.279	PRRX2 PRRX1
NKX3-1.p2	-0.285	NKX3-1
AAUCUCA	-0.285
PDX1.p2	-0.293	PDX1
UUGUUCG	-0.310
GCUACAU	-0.314
AGGUAGU	-0.344
CAGUGCA	-0.425
UAAGACU	-0.432
NFIL3.p2	-0.443	NFIL3
POU3F1..4.p2	-0.456	POU3F1 POU3F3 POU3F2 POU3F4
LEF1_TCF7_TCF7L1,2.p2	-0.465	TCF7 TCF7L2 LEF1 TCF7L1
FOXA2.p3	-0.467	FOXA2
ZNF238.p2	-0.474	ZNF238
CUX2.p2	-0.476	CUX2
FOXO1,3,4.p2	-0.499	FOXO1 FOXO4 FOXO3
GZF1.p2	-0.503	GZF1
STAT1,3.p3	-0.517	STAT1 STAT3
SOX5.p2	-0.540	SOX5
GAGGUAG	-0.599
CDX1,2,4.p2	-0.628	CDX1 CDX2 CDX4
EWSR1-FLI1.p2	-0.636	FLI1 EWSR1
LMO2.p2	-0.636	LMO2
GGACGGA	-0.644
GCUGGUG	-0.645
ONECUT1,2.p2	-0.647	ONECUT2 ONECUT1
ACUGGCC	-0.657
PAX6.p2	-0.675	PAX6
AACAGUC	-0.711
SRY.p2	-0.756	SRY
HLF.p2	-0.757	HLF
PATZ1.p2	-0.771	PATZ1
AGCACCA	-0.781
EOMES.p2	-0.820	EOMES
UUUUUGC	-0.834
EBF1.p2	-0.848	EBF1
CDC5L.p2	-0.849	CDC5L
AGCAGCG	-0.874
GAUUGUC	-0.876
UAUUGCU	-0.890
PAX4.p2	-0.890	PAX4
AAUCUCU	-0.912
PPARG.p2	-0.917	PPARG
CCAGCAU	-0.945
NHLH1,2.p2	-0.962	NHLH1 NHLH2
CGUGUCU	-1.016
GTF2A1,2.p2	-1.018	GTF2A1 GTF2A2
GAGAACU	-1.046
UUGGCAC	-1.088
AIRE.p2	-1.102	AIRE
SPZ1.p2	-1.105	SPZ1
PITX1..3.p2	-1.119	PITX2 PITX3 PITX1
GTF2I.p2	-1.144	GTF2I
ZIC1..3.p2	-1.201	ZIC1 ZIC2 ZIC3
AGCUUAU	-1.242
TAL1_TCF{3,4,12}.p2	-1.244	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
TLX1..3_NFIC{dimer}.p2	-1.249	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HMX1.p2	-1.260	HMX1
IKZF1.p2	-1.263	IKZF1
FEV.p2	-1.292	FEV
FOX{F1,F2,J1}.p2	-1.311	FOXF2 FOXJ1 FOXF1
AGCUGCC	-1.314
T.p2	-1.347	T
UGCAUAG	-1.354
GAGAUGA	-1.360
CACAGUG	-1.362
HOX{A5,B5}.p2	-1.366	HOXB5 HOXA5
GATA1..3.p2	-1.376	GATA1 GATA2 GATA3
AGUGCAA	-1.382
POU5F1_SOX2{dimer}.p2	-1.402	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOXL1.p2	-1.412	FOXL1
SNAI1..3.p2	-1.428	SNAI2 SNAI1 SNAI3
AAAGUGC	-1.446
CRX.p2	-1.499	CRX
NKX6-1,2.p2	-1.500	NKX6-1 NKX6-2
RBPJ.p2	-1.552	RBPJ
TLX2.p2	-1.582	TLX2
HOXA9_MEIS1.p2	-1.617	MEIS1 HOXA9
IKZF2.p2	-1.636	IKZF2
GGAAGAC	-1.701
FOSL2.p2	-1.744	FOSL2
AR.p2	-1.745	AR
MYFfamily.p2	-1.757	MYOD1 MYF6 MYF5 MYOG
MAZ.p2	-1.821	MAZ
RXRA_VDR{dimer}.p2	-1.833	VDR	$logo of RXRA_VDR{dimer}.p2$
AUGGCUU	-1.852
EN1,2.p2	-1.867	EN1 EN2
EVI1.p2	-1.880	EVI1
NR3C1.p2	-1.932	NR3C1
DBP.p2	-1.934	DBP
FOX{D1,D2}.p2	-1.964	FOXD2 FOXD1
TFCP2.p2	-1.965	TFCP2
RORA.p2	-1.972	RORA
FOX{C1,C2}.p2	-2.008	FOXC1 FOXC2
UCCCUUU	-2.028
HBP1_HMGB_SSRP1_UBTF.p2	-2.039	HMGB2 HMGB3 SSRP1 UBTF HBP1
ZNF423.p2	-2.051	ZNF423
NR4A2.p2	-2.072	NR4A2
POU2F1..3.p2	-2.099	POU2F2 POU2F1 POU2F3
MSX1,2.p2	-2.102	MSX1 MSX2
NKX2-1,4.p2	-2.125	NKX2-1 NKX2-4
TBX4,5.p2	-2.151	TBX5 TBX4
HNF1A.p2	-2.158	HNF1A
HNF4A_NR2F1,2.p2	-2.195	NR2F1 NR2F2 HNF4A
GLI1..3.p2	-2.292	GLI1 GLI2 GLI3
FOXP3.p2	-2.484	FOXP3
ZEB1.p2	-2.520	ZEB1
TCF4_dimer.p2	-2.548	TCF4
MTF1.p2	-2.557	MTF1
POU1F1.p2	-2.648	POU1F1
HIC1.p2	-2.667	HIC1
JUN.p2	-2.685	JUN JUND JUNB
ALX1.p2	-2.701	ALX1
ZFP161.p2	-2.786	ZFP161
NKX2-3_NKX2-5.p2	-2.843	NKX2-5 NKX2-3
RFX1..5_RFXANK_RFXAP.p2	-2.929	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
NANOG{mouse}.p2	-2.989	NANOG
ETS1,2.p2	-3.019	ETS2 ETS1
GGCUCAG	-3.184
RUNX1..3.p2	-3.238	RUNX1 RUNX3 RUNX2
REST.p3	-3.249	REST
SMAD1..7,9.p2	-3.457	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
UGUGCUU	-3.471
GGCAGUG	-3.480
MEF2{A,B,C,D}.p2	-3.495	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HAND1,2.p2	-3.503	HAND1 HAND2
NR1H4.p2	-3.636	NR1H4
GATA6.p2	-3.757	GATA6
CAGCAGG	-3.868
POU5F1.p2	-4.019	POU5F1
MYOD1.p2	-4.152	MYOD1
TGIF1.p2	-4.167	TGIF1
CCCUGAG	-4.218
KLF12.p2	-4.376	KLF12
RREB1.p2	-4.966	RREB1
CUCCCAA	-6.013

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Sample name: NCI60_1_NCI-H226

Sorted z-values for every WM.