ISMARA results: NCI60_1

Sample name: NCI60_1_NCI-H322M

Sorted Z-values histogram for the sample NCI60_1_NCI-H322M

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	11.549	YY1
E2F1..5.p2	6.688	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	6.677	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
EHF.p2	5.919	EHF
TFDP1.p2	5.468	TFDP1
ELF1,2,4.p2	5.453	ELF2 ELF1 ELF4
NRF1.p2	5.370	NRF1
ZNF143.p2	5.349	ZNF143
MYB.p2	4.977	MYB
NFY{A,B,C}.p2	4.569	NFYC NFYB NFYA
GGAAUGU	3.862
BPTF.p2	3.784	BPTF
ATF5_CREB3.p2	3.707	ATF5 CREB3
FOXD3.p2	3.686	FOXD3
SNAI1..3.p2	3.533	SNAI2 SNAI1 SNAI3
bHLH_family.p2	3.428	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
FOS_FOS{B,L1}_JUN{B,D}.p2	3.398	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ATF4.p2	2.983	ATF4
ZEB1.p2	2.807	ZEB1
HIF1A.p2	2.744	HIF1A
NFE2L2.p2	2.678	NFE2L2
AGUGGUU	2.621
AAGGCAC	2.586
XBP1.p3	2.578	XBP1
UCAAGUA	2.519
PAX5.p2	2.519	PAX5
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	2.487	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZBTB16.p2	2.421	ZBTB16
FOXN1.p2	2.399	FOXN1
UCACAUU	2.396
PBX1.p2	2.347	PBX1
BACH2.p2	2.232	BACH2
GFI1.p2	1.847	GFI1
UCCAGUU	1.822
TFAP2B.p2	1.819	TFAP2B
TP53.p2	1.739	TP53
KLF4.p3	1.632	KLF4
GUAACAG	1.500
ZNF384.p2	1.493	ZNF384
ACAGUAU	1.490
NKX3-1.p2	1.444	NKX3-1
SPI1.p2	1.440	SPI1
NKX3-2.p2	1.436	NKX3-2
CREB1.p2	1.430	CREB1
RBPJ.p2	1.375	RBPJ
GGAGUGU	1.273
GUGCAAA	1.257
PATZ1.p2	1.256	PATZ1
CCUUCAU	1.242
NKX2-2,8.p2	1.238	NKX2-2 NKX2-8
CTCF.p2	1.228	CTCF
RXRG_dimer.p3	1.158	NR1H2 RXRA PPARG PPARA RXRB RXRG
GUAGUGU	1.092
SOX{8,9,10}.p2	1.068	SOX9 SOX8 SOX10
ESR1.p2	1.058	ESR1
HES1.p2	1.044	HES1
FOXQ1.p2	1.008	FOXQ1
ZBTB6.p2	1.004	ZBTB6
HOX{A4,D4}.p2	0.980	HOXA4 HOXD4
AAGGUGC	0.919
AUGGCAC	0.885
SOX5.p2	0.828	SOX5
SOX17.p2	0.824	SOX17
UCACAGU	0.813
HMX1.p2	0.803	HMX1
SP1.p2	0.753	SP1
GUCAGUU	0.721
HMGA1,2.p2	0.711	HMGA1 HMGA2
NFE2L1.p2	0.687	NFE2L1
ACAGUAC	0.663
ESRRA.p2	0.652	ESRRA
NR4A2.p2	0.600	NR4A2
AUGUGCC	0.589
CDC5L.p2	0.558	CDC5L
ZNF148.p2	0.549	ZNF148
CCAGUGU	0.544
ATF2.p2	0.524	ATF2
GGCAAGA	0.516
EP300.p2	0.490	EP300
IKZF1.p2	0.458	IKZF1
AACCUGG	0.452
AUUGCAC	0.444
ADNP_IRX_SIX_ZHX.p2	0.425	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UGAAAUG	0.422
GCUACAU	0.414
AAUGCCC	0.405
CAGUGCA	0.384
HOX{A6,A7,B6,B7}.p2	0.357	HOXB6 HOXA7 HOXB7 HOXA6
ACUGCAU	0.341
GAGAUGA	0.337
AACCGUU	0.329
AGGUAGU	0.316
SOX2.p2	0.315	SOX2
AAUCUCA	0.304
ARID5B.p2	0.295	ARID5B
UAAUGCU	0.288
T.p2	0.288	T
FOXO1,3,4.p2	0.275	FOXO1 FOXO4 FOXO3
AGCAGCA	0.254
POU6F1.p2	0.248	POU6F1
GAUAUGU	0.238
AGCAGCG	0.217
CRX.p2	0.183	CRX
GCAGCAU	0.171
SREBF1,2.p2	0.165	SREBF1 SREBF2
UGUGCGU	0.154
UUGGUCC	0.152
NKX6-1,2.p2	0.144	NKX6-1 NKX6-2
PRRX1,2.p2	0.131	PRRX2 PRRX1
NR6A1.p2	0.130	NR6A1
VSX1,2.p2	0.127	VSX2 VSX1
CUUUGGU	0.099
AAGUGCU	0.091
CGUACCG	0.075
ACAUUCA	0.075
UUGUUCG	0.053
AAUCUCU	0.044
UGCAUUG	0.042
UGACCUA	0.028
GAUUGUC	0.028
UUGGCAA	-0.030
ACCCGUA	-0.045
PAX3,7.p2	-0.048	PAX7 PAX3
ACUGGCC	-0.055
AGCUGCC	-0.091
AACAGUC	-0.103
LMO2.p2	-0.110	LMO2
FOX{F1,F2,J1}.p2	-0.116	FOXF2 FOXJ1 FOXF1
DMAP1_NCOR{1,2}_SMARC.p2	-0.168	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AGCUUAU	-0.198
CUACAGU	-0.237
ACCCUGU	-0.239
GAUCAGA	-0.267
TFAP4.p2	-0.269	TFAP4
UUGGCAC	-0.274
STAT2,4,6.p2	-0.279	STAT2 STAT4 STAT6
GGACGGA	-0.291
PAX8.p2	-0.305	PAX8
AACGGAA	-0.305
POU3F1..4.p2	-0.331	POU3F1 POU3F3 POU3F2 POU3F4
GFI1B.p2	-0.348	GFI1B
LHX3,4.p2	-0.352	LHX3 LHX4
EWSR1-FLI1.p2	-0.360	FLI1 EWSR1
GCUGGUG	-0.374
GZF1.p2	-0.412	GZF1
AUGACAC	-0.420
MSX1,2.p2	-0.421	MSX1 MSX2
EGR1..3.p2	-0.424	EGR3 EGR1 EGR2
POU5F1_SOX2{dimer}.p2	-0.428	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
PDX1.p2	-0.448	PDX1
PPARG.p2	-0.475	PPARG
LEF1_TCF7_TCF7L1,2.p2	-0.481	TCF7 TCF7L2 LEF1 TCF7L1
ONECUT1,2.p2	-0.505	ONECUT2 ONECUT1
ATF6.p2	-0.515	ATF6
NKX2-3_NKX2-5.p2	-0.543	NKX2-5 NKX2-3
UAAGACG	-0.546
CDX1,2,4.p2	-0.552	CDX1 CDX2 CDX4
TEAD1.p2	-0.567	TEAD1 TEAD2 TEAD3 TEAD4
GUAAACA	-0.573
NFIL3.p2	-0.589	NFIL3
SPZ1.p2	-0.600	SPZ1
AGUGCAA	-0.615
CGUGUCU	-0.623
MAFB.p2	-0.656	MAFB
NFE2.p2	-0.680	NFE2
HOXA9_MEIS1.p2	-0.691	MEIS1 HOXA9
PRDM1.p3	-0.720	PRDM1
PAX4.p2	-0.727	PAX4
RXRA_VDR{dimer}.p2	-0.775	VDR	$logo of RXRA_VDR{dimer}.p2$
EBF1.p2	-0.794	EBF1
CCAGCAU	-0.827
NFIX.p2	-0.832	NFIX
HLF.p2	-0.835	HLF
FOXA2.p3	-0.849	FOXA2
UAAGACU	-0.860
GAGAACU	-0.873
PAX2.p2	-0.885	PAX2
AUGGCUU	-0.890
CUX2.p2	-0.894	CUX2
PAX6.p2	-0.897	PAX6
MZF1.p2	-0.938	MZF1
CEBPA,B_DDIT3.p2	-0.946	DDIT3 CEBPA CEBPB
AAAGUGC	-1.021
UCCCUUU	-1.037
ZNF238.p2	-1.083	ZNF238
NFATC1..3.p2	-1.103	NFATC3 NFATC2 NFATC1
GTF2I.p2	-1.104	GTF2I
STAT5{A,B}.p2	-1.168	STAT5B STAT5A
ZFP161.p2	-1.209	ZFP161
RORA.p2	-1.219	RORA
AACACUG	-1.225
POU2F1..3.p2	-1.280	POU2F2 POU2F1 POU2F3
UGCAUAG	-1.325
EOMES.p2	-1.338	EOMES
NKX2-1,4.p2	-1.339	NKX2-1 NKX2-4
FOX{I1,J2}.p2	-1.346	FOXI1 FOXJ2
NANOG.p2	-1.348	NANOG
HOX{A5,B5}.p2	-1.398	HOXB5 HOXA5
MYBL2.p2	-1.425	MYBL2
IRF1,2,7.p3	-1.434	IRF1 IRF2 IRF7
FOSL2.p2	-1.490	FOSL2
GLI1..3.p2	-1.499	GLI1 GLI2 GLI3
AGCACCA	-1.513
NR5A1,2.p2	-1.523	NR5A1 NR5A2
CCCUGAG	-1.542
SPIB.p2	-1.567	SPIB
ETS1,2.p2	-1.616	ETS2 ETS1
SRY.p2	-1.631	SRY
PITX1..3.p2	-1.728	PITX2 PITX3 PITX1
AR.p2	-1.764	AR
AHR_ARNT_ARNT2.p2	-1.785	ARNT AHR ARNT2
TFAP2{A,C}.p2	-1.819	TFAP2C TFAP2A
SRF.p3	-1.839	SRF
TAL1_TCF{3,4,12}.p2	-1.961	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NANOG{mouse}.p2	-2.013	NANOG
TFEB.p2	-2.016	TFEB
CACAGUG	-2.018
MTF1.p2	-2.044	MTF1
NR3C1.p2	-2.052	NR3C1
NFKB1_REL_RELA.p2	-2.080	RELA REL NFKB1
FOXP3.p2	-2.124	FOXP3
HNF1A.p2	-2.153	HNF1A
NHLH1,2.p2	-2.161	NHLH1 NHLH2
HNF4A_NR2F1,2.p2	-2.201	NR2F1 NR2F2 HNF4A
RXR{A,B,G}.p2	-2.253	RXRA RXRB RXRG
IKZF2.p2	-2.274	IKZF2
HSF1,2.p2	-2.299	HSF1 HSF2
TBX4,5.p2	-2.305	TBX5 TBX4
TLX2.p2	-2.336	TLX2
SMAD1..7,9.p2	-2.342	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
MEF2{A,B,C,D}.p2	-2.374	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
AIRE.p2	-2.386	AIRE
UUUUUGC	-2.389
HBP1_HMGB_SSRP1_UBTF.p2	-2.396	HMGB2 HMGB3 SSRP1 UBTF HBP1
HIC1.p2	-2.441	HIC1
GGAAGAC	-2.446
FOXL1.p2	-2.474	FOXL1
CAGCAGG	-2.537
ZIC1..3.p2	-2.560	ZIC1 ZIC2 ZIC3
ALX1.p2	-2.635	ALX1
UAUUGCU	-2.678
STAT1,3.p3	-2.696	STAT1 STAT3
EN1,2.p2	-2.742	EN1 EN2
GAGGUAG	-2.812
GATA1..3.p2	-2.813	GATA1 GATA2 GATA3
FOX{D1,D2}.p2	-2.887	FOXD2 FOXD1
MYFfamily.p2	-2.896	MYOD1 MYF6 MYF5 MYOG
FOX{C1,C2}.p2	-2.900	FOXC1 FOXC2
RFX1..5_RFXANK_RFXAP.p2	-2.902	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
POU1F1.p2	-2.942	POU1F1
DBP.p2	-2.983	DBP
UGUGCUU	-3.057
TBP.p2	-3.069	TBP
GTF2A1,2.p2	-3.086	GTF2A1 GTF2A2
GGCAGUG	-3.096
EVI1.p2	-3.125	EVI1
AAUACUG	-3.141
FEV.p2	-3.147	FEV
NR1H4.p2	-3.309	NR1H4
ZNF423.p2	-3.381	ZNF423
GGCUCAG	-3.391
GATA6.p2	-3.459	GATA6
TFCP2.p2	-3.460	TFCP2
HAND1,2.p2	-3.513	HAND1 HAND2
TGIF1.p2	-3.637	TGIF1
RREB1.p2	-3.652	RREB1
JUN.p2	-3.657	JUN JUND JUNB
REST.p3	-3.764	REST
TCF4_dimer.p2	-3.768	TCF4
POU5F1.p2	-3.803	POU5F1
MAZ.p2	-3.905	MAZ
TLX1..3_NFIC{dimer}.p2	-4.154	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
RUNX1..3.p2	-4.590	RUNX1 RUNX3 RUNX2
MYOD1.p2	-5.034	MYOD1
CUCCCAA	-5.425
KLF12.p2	-5.531	KLF12

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Sample name: NCI60_1_NCI-H322M

Sorted z-values for every WM.