ISMARA results: NCI60_1

Sample name: NCI60_1_NCI-H522

Sorted Z-values histogram for the sample NCI60_1_NCI-H522

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
NRF1.p2	12.351	NRF1
E2F1..5.p2	10.807	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	9.902	YY1
ZNF143.p2	9.513	ZNF143
ELK1,4_GABP{A,B1}.p3	8.872	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
TFDP1.p2	6.978	TFDP1
MYB.p2	6.106	MYB
ELF1,2,4.p2	5.265	ELF2 ELF1 ELF4
EHF.p2	5.107	EHF
NFY{A,B,C}.p2	4.511	NFYC NFYB NFYA
HES1.p2	4.214	HES1
ATF5_CREB3.p2	3.856	ATF5 CREB3
UCAAGUA	3.655
SOX17.p2	3.537	SOX17
FOXD3.p2	3.278	FOXD3
BPTF.p2	3.100	BPTF
SOX2.p2	3.081	SOX2
bHLH_family.p2	2.740	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	2.734	HIF1A
PITX1..3.p2	2.526	PITX2 PITX3 PITX1
PAX5.p2	2.496	PAX5
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	2.387	ARNT MAX MYC USF1 BHLHB2 ARNT2
ATF4.p2	2.338	ATF4
CTCF.p2	2.145	CTCF
AGUGGUU	2.062
GGAAUGU	2.019
ACAGUAC	1.922
AGCACCA	1.908
GFI1.p2	1.872	GFI1
CCUUCAU	1.858
SP1.p2	1.827	SP1
NKX2-2,8.p2	1.686	NKX2-2 NKX2-8
PRRX1,2.p2	1.663	PRRX2 PRRX1
XBP1.p3	1.568	XBP1
EOMES.p2	1.509	EOMES
MAFB.p2	1.493	MAFB
UCACAUU	1.451
IKZF1.p2	1.346	IKZF1
NFE2L2.p2	1.325	NFE2L2
KLF4.p3	1.275	KLF4
RXRG_dimer.p3	1.260	NR1H2 RXRA PPARG PPARA RXRB RXRG
AGCAGCA	1.253
TFAP2B.p2	1.249	TFAP2B
AAGGCAC	1.196
AAUCUCA	1.183
EP300.p2	1.175	EP300
AGGUAGU	1.110
CREB1.p2	1.108	CREB1
UUGGUCC	1.051
EGR1..3.p2	1.049	EGR3 EGR1 EGR2
SREBF1,2.p2	1.033	SREBF1 SREBF2
ZBTB16.p2	1.014	ZBTB16
BACH2.p2	1.009	BACH2
UUGGCAA	1.006
AACAGUC	0.994
SOX{8,9,10}.p2	0.984	SOX9 SOX8 SOX10
GUAACAG	0.978
HOX{A4,D4}.p2	0.950	HOXA4 HOXD4
SOX5.p2	0.940	SOX5
ESRRA.p2	0.896	ESRRA
HOX{A6,A7,B6,B7}.p2	0.896	HOXB6 HOXA7 HOXB7 HOXA6
FOXN1.p2	0.799	FOXN1
TP53.p2	0.795	TP53
NFE2L1.p2	0.793	NFE2L1
AACACUG	0.764
UCACAGU	0.721
CRX.p2	0.713	CRX
CAGUGCA	0.699
GGAGUGU	0.689
UGAAAUG	0.688
ONECUT1,2.p2	0.654	ONECUT2 ONECUT1
UUGUUCG	0.588
NFE2.p2	0.557	NFE2
AUGGCAC	0.532
DMAP1_NCOR{1,2}_SMARC.p2	0.528	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GAUUGUC	0.510
ACUGCAU	0.498
UAAGACG	0.495
GCUGGUG	0.426
ZBTB6.p2	0.363	ZBTB6
ARID5B.p2	0.356	ARID5B
AUGUGCC	0.353
POU3F1..4.p2	0.352	POU3F1 POU3F3 POU3F2 POU3F4
AGCUGCC	0.318
UGACCUA	0.316
HSF1,2.p2	0.281	HSF1 HSF2
FOXQ1.p2	0.281	FOXQ1
T.p2	0.271	T
AGCUUAU	0.232
PBX1.p2	0.199	PBX1
UGCAUUG	0.194
ZNF148.p2	0.194	ZNF148
NKX3-1.p2	0.187	NKX3-1
SPIB.p2	0.187	SPIB
GCAGCAU	0.180
LMO2.p2	0.165	LMO2
SPI1.p2	0.155	SPI1
ACAUUCA	0.127
AUGACAC	0.074
UCCAGUU	0.071
STAT2,4,6.p2	0.041	STAT2 STAT4 STAT6
GAUAUGU	0.033
AAGGUGC	0.026
LEF1_TCF7_TCF7L1,2.p2	0.010	TCF7 TCF7L2 LEF1 TCF7L1
ACCCGUA	0.001
AACCGUU	-0.008
CDX1,2,4.p2	-0.016	CDX1 CDX2 CDX4
HMGA1,2.p2	-0.022	HMGA1 HMGA2
CCAGUGU	-0.056
ATF2.p2	-0.082	ATF2
GGCAAGA	-0.088
ZIC1..3.p2	-0.097	ZIC1 ZIC2 ZIC3
NANOG.p2	-0.122	NANOG
GUAGUGU	-0.122
UGUGCGU	-0.127
AACCUGG	-0.128
AAUCUCU	-0.150
FOXL1.p2	-0.180	FOXL1
CGUGUCU	-0.191
RORA.p2	-0.194	RORA
PAX3,7.p2	-0.204	PAX7 PAX3
ACAGUAU	-0.215
VSX1,2.p2	-0.228	VSX2 VSX1
GCUACAU	-0.231
GZF1.p2	-0.251	GZF1
PAX8.p2	-0.257	PAX8
ADNP_IRX_SIX_ZHX.p2	-0.280	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GFI1B.p2	-0.286	GFI1B
IKZF2.p2	-0.300	IKZF2
NR4A2.p2	-0.325	NR4A2
FOXA2.p3	-0.334	FOXA2
ZNF423.p2	-0.346	ZNF423
CUACAGU	-0.350
AAUACUG	-0.372
CUUUGGU	-0.373
TFAP2{A,C}.p2	-0.379	TFAP2C TFAP2A
NANOG{mouse}.p2	-0.386	NANOG
MZF1.p2	-0.424	MZF1
STAT5{A,B}.p2	-0.428	STAT5B STAT5A
CDC5L.p2	-0.430	CDC5L
GUGCAAA	-0.431
AGCAGCG	-0.464
MYBL2.p2	-0.465	MYBL2
AACGGAA	-0.514
ACCCUGU	-0.533
UAAGACU	-0.549
UGCAUAG	-0.551
NR6A1.p2	-0.564	NR6A1
PDX1.p2	-0.567	PDX1
ESR1.p2	-0.571	ESR1
UUUUUGC	-0.606
NFATC1..3.p2	-0.606	NFATC3 NFATC2 NFATC1
GAGAACU	-0.621
GUCAGUU	-0.621
PATZ1.p2	-0.639	PATZ1
GATA1..3.p2	-0.643	GATA1 GATA2 GATA3
GAUCAGA	-0.653
ALX1.p2	-0.679	ALX1
UAAUGCU	-0.681
GGAAGAC	-0.686
HMX1.p2	-0.698	HMX1
ZNF384.p2	-0.734	ZNF384
POU6F1.p2	-0.735	POU6F1
AUGGCUU	-0.736
FOX{D1,D2}.p2	-0.747	FOXD2 FOXD1
TFAP4.p2	-0.774	TFAP4
SRY.p2	-0.777	SRY
AIRE.p2	-0.795	AIRE
RBPJ.p2	-0.802	RBPJ
ACUGGCC	-0.806
NKX2-1,4.p2	-0.813	NKX2-1 NKX2-4
AAUGCCC	-0.842
NKX6-1,2.p2	-0.848	NKX6-1 NKX6-2
GTF2I.p2	-0.910	GTF2I
CGUACCG	-0.925
PAX6.p2	-0.937	PAX6
GGACGGA	-0.943
AR.p2	-0.975	AR
PAX4.p2	-0.990	PAX4
FOX{F1,F2,J1}.p2	-1.003	FOXF2 FOXJ1 FOXF1
EBF1.p2	-1.054	EBF1
ZFP161.p2	-1.061	ZFP161
CACAGUG	-1.111
CUX2.p2	-1.127	CUX2
RXR{A,B,G}.p2	-1.151	RXRA RXRB RXRG
ZEB1.p2	-1.181	ZEB1
HLF.p2	-1.239	HLF
CCCUGAG	-1.244
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.245	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
FOXO1,3,4.p2	-1.271	FOXO1 FOXO4 FOXO3
GUAAACA	-1.278
PRDM1.p3	-1.286	PRDM1
PPARG.p2	-1.332	PPARG
ZNF238.p2	-1.334	ZNF238
NFIL3.p2	-1.358	NFIL3
DBP.p2	-1.359	DBP
AGUGCAA	-1.370
UUGGCAC	-1.441
SPZ1.p2	-1.449	SPZ1
TAL1_TCF{3,4,12}.p2	-1.449	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GAGAUGA	-1.466
UAUUGCU	-1.496
TFEB.p2	-1.501	TFEB
HOXA9_MEIS1.p2	-1.510	MEIS1 HOXA9
JUN.p2	-1.512	JUN JUND JUNB
GAGGUAG	-1.514
LHX3,4.p2	-1.518	LHX3 LHX4
POU1F1.p2	-1.522	POU1F1
UCCCUUU	-1.524
CCAGCAU	-1.534
RFX1..5_RFXANK_RFXAP.p2	-1.567	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
TEAD1.p2	-1.612	TEAD1 TEAD2 TEAD3 TEAD4
HBP1_HMGB_SSRP1_UBTF.p2	-1.673	HMGB2 HMGB3 SSRP1 UBTF HBP1
PAX2.p2	-1.716	PAX2
AUUGCAC	-1.732
GLI1..3.p2	-1.733	GLI1 GLI2 GLI3
NFIX.p2	-1.755	NFIX
FOSL2.p2	-1.769	FOSL2
FOX{C1,C2}.p2	-1.770	FOXC1 FOXC2
TLX2.p2	-1.797	TLX2
TCF4_dimer.p2	-1.798	TCF4
NHLH1,2.p2	-1.798	NHLH1 NHLH2
RXRA_VDR{dimer}.p2	-1.822	VDR	$logo of RXRA_VDR{dimer}.p2$
MSX1,2.p2	-1.831	MSX1 MSX2
TBX4,5.p2	-1.889	TBX5 TBX4
MEF2{A,B,C,D}.p2	-1.933	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
EWSR1-FLI1.p2	-1.955	FLI1 EWSR1
GATA6.p2	-1.975	GATA6
POU5F1_SOX2{dimer}.p2	-1.997	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CEBPA,B_DDIT3.p2	-2.012	DDIT3 CEBPA CEBPB
HOX{A5,B5}.p2	-2.017	HOXB5 HOXA5
POU2F1..3.p2	-2.033	POU2F2 POU2F1 POU2F3
NKX2-3_NKX2-5.p2	-2.046	NKX2-5 NKX2-3
MAZ.p2	-2.119	MAZ
MYOD1.p2	-2.159	MYOD1
RREB1.p2	-2.181	RREB1
NKX3-2.p2	-2.196	NKX3-2
HNF1A.p2	-2.241	HNF1A
AAAGUGC	-2.280
MTF1.p2	-2.282	MTF1
AAGUGCU	-2.297
NR1H4.p2	-2.350	NR1H4
EVI1.p2	-2.354	EVI1
FOXP3.p2	-2.392	FOXP3
NR3C1.p2	-2.411	NR3C1
AHR_ARNT_ARNT2.p2	-2.435	ARNT AHR ARNT2
SRF.p3	-2.469	SRF
ATF6.p2	-2.565	ATF6
GGCUCAG	-2.661
REST.p3	-2.714	REST
NR5A1,2.p2	-2.777	NR5A1 NR5A2
GGCAGUG	-2.987
HAND1,2.p2	-3.045	HAND1 HAND2
RUNX1..3.p2	-3.053	RUNX1 RUNX3 RUNX2
SNAI1..3.p2	-3.119	SNAI2 SNAI1 SNAI3
NFKB1_REL_RELA.p2	-3.152	RELA REL NFKB1
STAT1,3.p3	-3.184	STAT1 STAT3
CAGCAGG	-3.241
EN1,2.p2	-3.258	EN1 EN2
UGUGCUU	-3.285
GTF2A1,2.p2	-3.355	GTF2A1 GTF2A2
KLF12.p2	-3.409	KLF12
FOX{I1,J2}.p2	-3.412	FOXI1 FOXJ2
POU5F1.p2	-3.492	POU5F1
TBP.p2	-3.625	TBP
FEV.p2	-3.708	FEV
TLX1..3_NFIC{dimer}.p2	-3.925	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
TFCP2.p2	-3.959	TFCP2
ETS1,2.p2	-4.064	ETS2 ETS1
HNF4A_NR2F1,2.p2	-4.093	NR2F1 NR2F2 HNF4A
HIC1.p2	-4.307	HIC1
CUCCCAA	-4.404
IRF1,2,7.p3	-4.461	IRF1 IRF2 IRF7
MYFfamily.p2	-4.736	MYOD1 MYF6 MYF5 MYOG
TGIF1.p2	-5.451	TGIF1
SMAD1..7,9.p2	-5.780	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9

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Sample name: NCI60_1_NCI-H522

Sorted z-values for every WM.