ISMARA results: NCI60_1

Sample name: NCI60_1_OVCAR-3

Sorted Z-values histogram for the sample NCI60_1_OVCAR-3

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	8.624	YY1
ELK1,4_GABP{A,B1}.p3	7.900	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
TFDP1.p2	6.759	TFDP1
NRF1.p2	6.543	NRF1
E2F1..5.p2	6.354	E2F4 E2F5 E2F2 E2F1 E2F3
ELF1,2,4.p2	6.136	ELF2 ELF1 ELF4
ZNF143.p2	5.600	ZNF143
NFY{A,B,C}.p2	5.412	NFYC NFYB NFYA
MYB.p2	4.898	MYB
bHLH_family.p2	4.535	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
GGAAUGU	3.973
EHF.p2	3.884	EHF
FOXD3.p2	3.522	FOXD3
UCAAGUA	3.350
BPTF.p2	2.951	BPTF
PAX5.p2	2.908	PAX5
PBX1.p2	2.901	PBX1
AGUGGUU	2.795
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	2.623	ARNT MAX MYC USF1 BHLHB2 ARNT2
ATF5_CREB3.p2	2.600	ATF5 CREB3
CREB1.p2	2.589	CREB1
NKX3-2.p2	2.565	NKX3-2
ATF4.p2	2.538	ATF4
FOXN1.p2	2.474	FOXN1
NR4A2.p2	2.413	NR4A2
UCCAGUU	2.405
SOX{8,9,10}.p2	2.397	SOX9 SOX8 SOX10
NFE2L2.p2	2.268	NFE2L2
HOX{A6,A7,B6,B7}.p2	2.252	HOXB6 HOXA7 HOXB7 HOXA6
SOX2.p2	2.193	SOX2
UCACAUU	2.160
GFI1.p2	2.144	GFI1
HES1.p2	2.031	HES1
ZNF148.p2	1.992	ZNF148
LEF1_TCF7_TCF7L1,2.p2	1.967	TCF7 TCF7L2 LEF1 TCF7L1
AHR_ARNT_ARNT2.p2	1.916	ARNT AHR ARNT2
HIF1A.p2	1.873	HIF1A
GUAGUGU	1.788
GCAGCAU	1.712
ZNF384.p2	1.696	ZNF384
ACAGUAU	1.678
GUGCAAA	1.671
UUGUUCG	1.631
NKX2-2,8.p2	1.569	NKX2-2 NKX2-8
PATZ1.p2	1.562	PATZ1
RBPJ.p2	1.504	RBPJ
CUUUGGU	1.502
ZEB1.p2	1.501	ZEB1
RXRG_dimer.p3	1.485	NR1H2 RXRA PPARG PPARA RXRB RXRG
TFAP2B.p2	1.446	TFAP2B
PRRX1,2.p2	1.362	PRRX2 PRRX1
BACH2.p2	1.329	BACH2
SOX17.p2	1.135	SOX17
UUGGCAA	1.083
UCACAGU	1.064
ACAGUAC	1.056
HOX{A4,D4}.p2	1.036	HOXA4 HOXD4
XBP1.p3	1.017	XBP1
AAUGCCC	0.989
ZBTB16.p2	0.970	ZBTB16
EWSR1-FLI1.p2	0.947	FLI1 EWSR1
GAUUGUC	0.867
AAUACUG	0.853
CCUUCAU	0.766
CRX.p2	0.735	CRX
GUAACAG	0.735
AGCUUAU	0.698
CAGUGCA	0.684
STAT5{A,B}.p2	0.626	STAT5B STAT5A
HSF1,2.p2	0.625	HSF1 HSF2
SPI1.p2	0.598	SPI1
GUCAGUU	0.565
MAFB.p2	0.559	MAFB
ZBTB6.p2	0.552	ZBTB6
GCUACAU	0.543
NKX2-3_NKX2-5.p2	0.528	NKX2-5 NKX2-3
AAGGCAC	0.516
ACUGCAU	0.509
GZF1.p2	0.494	GZF1
ATF2.p2	0.487	ATF2
AACACUG	0.471
MZF1.p2	0.443	MZF1
SNAI1..3.p2	0.421	SNAI2 SNAI1 SNAI3
UAAUGCU	0.420
AACCUGG	0.398
UGAAAUG	0.388
GGAGUGU	0.374
UGCAUUG	0.340
CDC5L.p2	0.284	CDC5L
EP300.p2	0.281	EP300
CUACAGU	0.279
UUGGUCC	0.278
AACAGUC	0.278
UGACCUA	0.238
NR5A1,2.p2	0.231	NR5A1 NR5A2
TP53.p2	0.227	TP53
AGGUAGU	0.205
NKX6-1,2.p2	0.194	NKX6-1 NKX6-2
NFIX.p2	0.193	NFIX
NR6A1.p2	0.192	NR6A1
AGCACCA	0.177
FOXA2.p3	0.169	FOXA2
AACCGUU	0.164
STAT2,4,6.p2	0.157	STAT2 STAT4 STAT6
AAUCUCA	0.109
FOS_FOS{B,L1}_JUN{B,D}.p2	0.099	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
PRDM1.p3	0.097	PRDM1
IKZF1.p2	0.039	IKZF1
GGACGGA	0.027
TLX2.p2	0.021	TLX2
ACCCGUA	0.020
AAUCUCU	0.017
AACGGAA	0.007
PAX8.p2	-0.045	PAX8
SP1.p2	-0.047	SP1
SOX5.p2	-0.053	SOX5
AUGGCAC	-0.066
VSX1,2.p2	-0.088	VSX2 VSX1
AAGGUGC	-0.099
ESR1.p2	-0.100	ESR1
CDX1,2,4.p2	-0.123	CDX1 CDX2 CDX4
AGCAGCA	-0.124
UAAGACG	-0.126
UGUGCGU	-0.139
SPZ1.p2	-0.142	SPZ1
GAUAUGU	-0.158
CTCF.p2	-0.175	CTCF
PAX3,7.p2	-0.178	PAX7 PAX3
KLF4.p3	-0.188	KLF4
CCAGUGU	-0.195
HMX1.p2	-0.224	HMX1
GFI1B.p2	-0.224	GFI1B
AUUGCAC	-0.228
AAGUGCU	-0.230
ARID5B.p2	-0.257	ARID5B
AUGACAC	-0.292
CGUACCG	-0.295
DMAP1_NCOR{1,2}_SMARC.p2	-0.377	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
PAX4.p2	-0.383	PAX4
UAAGACU	-0.394
SRY.p2	-0.399	SRY
NKX3-1.p2	-0.441	NKX3-1
AUGUGCC	-0.464
CGUGUCU	-0.498
GCUGGUG	-0.500
POU3F1..4.p2	-0.500	POU3F1 POU3F3 POU3F2 POU3F4
SREBF1,2.p2	-0.522	SREBF1 SREBF2
GAGAACU	-0.530
CUX2.p2	-0.575	CUX2
ACUGGCC	-0.588
T.p2	-0.594	T
PPARG.p2	-0.620	PPARG
ACAUUCA	-0.630
ADNP_IRX_SIX_ZHX.p2	-0.658	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
TBP.p2	-0.659	TBP
POU6F1.p2	-0.671	POU6F1
TEAD1.p2	-0.674	TEAD1 TEAD2 TEAD3 TEAD4
AGCAGCG	-0.702
NFE2L1.p2	-0.707	NFE2L1
MEF2{A,B,C,D}.p2	-0.725	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HLF.p2	-0.728	HLF
TFAP4.p2	-0.732	TFAP4
NFIL3.p2	-0.755	NFIL3
GAUCAGA	-0.758
ACCCUGU	-0.763
CEBPA,B_DDIT3.p2	-0.775	DDIT3 CEBPA CEBPB
FOXQ1.p2	-0.780	FOXQ1
NFE2.p2	-0.784	NFE2
ESRRA.p2	-0.786	ESRRA
PDX1.p2	-0.794	PDX1
HOXA9_MEIS1.p2	-0.798	MEIS1 HOXA9
POU5F1_SOX2{dimer}.p2	-0.800	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
ONECUT1,2.p2	-0.807	ONECUT2 ONECUT1
UGUGCUU	-0.828
FOX{F1,F2,J1}.p2	-0.832	FOXF2 FOXJ1 FOXF1
NKX2-1,4.p2	-0.840	NKX2-1 NKX2-4
EBF1.p2	-0.885	EBF1
GLI1..3.p2	-0.894	GLI1 GLI2 GLI3
RREB1.p2	-0.914	RREB1
LMO2.p2	-0.934	LMO2
FEV.p2	-0.944	FEV
AGCUGCC	-0.949
UAUUGCU	-0.953
TFEB.p2	-0.974	TFEB
AR.p2	-0.994	AR
PAX6.p2	-1.032	PAX6
FOX{I1,J2}.p2	-1.033	FOXI1 FOXJ2
FOSL2.p2	-1.036	FOSL2
CCAGCAU	-1.046
GUAAACA	-1.047
GAGAUGA	-1.073
ZNF238.p2	-1.076	ZNF238
NFKB1_REL_RELA.p2	-1.120	RELA REL NFKB1
PAX2.p2	-1.124	PAX2
GGCAAGA	-1.128
ALX1.p2	-1.226	ALX1
FOXO1,3,4.p2	-1.238	FOXO1 FOXO4 FOXO3
LHX3,4.p2	-1.304	LHX3 LHX4
UUGGCAC	-1.305
AGUGCAA	-1.307
IKZF2.p2	-1.308	IKZF2
SPIB.p2	-1.322	SPIB
DBP.p2	-1.324	DBP
ZIC1..3.p2	-1.328	ZIC1 ZIC2 ZIC3
TAL1_TCF{3,4,12}.p2	-1.330	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
RORA.p2	-1.367	RORA
MYFfamily.p2	-1.450	MYOD1 MYF6 MYF5 MYOG
GAGGUAG	-1.461
AUGGCUU	-1.463
GTF2I.p2	-1.485	GTF2I
NANOG.p2	-1.548	NANOG
SRF.p3	-1.574	SRF
FOXL1.p2	-1.607	FOXL1
MSX1,2.p2	-1.615	MSX1 MSX2
HBP1_HMGB_SSRP1_UBTF.p2	-1.615	HMGB2 HMGB3 SSRP1 UBTF HBP1
TCF4_dimer.p2	-1.659	TCF4
EGR1..3.p2	-1.678	EGR3 EGR1 EGR2
AIRE.p2	-1.745	AIRE
EOMES.p2	-1.770	EOMES
NHLH1,2.p2	-1.805	NHLH1 NHLH2
MYBL2.p2	-1.813	MYBL2
CACAGUG	-1.823
MAZ.p2	-1.829	MAZ
AAAGUGC	-1.833
NFATC1..3.p2	-1.880	NFATC3 NFATC2 NFATC1
HMGA1,2.p2	-1.904	HMGA1 HMGA2
HNF1A.p2	-1.932	HNF1A
CAGCAGG	-1.934
FOX{C1,C2}.p2	-1.944	FOXC1 FOXC2
ATF6.p2	-1.969	ATF6
NR3C1.p2	-1.988	NR3C1
PITX1..3.p2	-2.010	PITX2 PITX3 PITX1
ETS1,2.p2	-2.045	ETS2 ETS1
UGCAUAG	-2.061
ZNF423.p2	-2.075	ZNF423
RXR{A,B,G}.p2	-2.091	RXRA RXRB RXRG
POU2F1..3.p2	-2.105	POU2F2 POU2F1 POU2F3
CCCUGAG	-2.135
UCCCUUU	-2.135
RFX1..5_RFXANK_RFXAP.p2	-2.157	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
GATA1..3.p2	-2.205	GATA1 GATA2 GATA3
NANOG{mouse}.p2	-2.227	NANOG
JUN.p2	-2.282	JUN JUND JUNB
MTF1.p2	-2.287	MTF1
RXRA_VDR{dimer}.p2	-2.309	VDR	$logo of RXRA_VDR{dimer}.p2$
HAND1,2.p2	-2.323	HAND1 HAND2
EN1,2.p2	-2.323	EN1 EN2
FOX{D1,D2}.p2	-2.354	FOXD2 FOXD1
ZFP161.p2	-2.380	ZFP161
FOXP3.p2	-2.504	FOXP3
GGCAGUG	-2.528
GGAAGAC	-2.583
IRF1,2,7.p3	-2.644	IRF1 IRF2 IRF7
STAT1,3.p3	-2.663	STAT1 STAT3
HOX{A5,B5}.p2	-2.701	HOXB5 HOXA5
GTF2A1,2.p2	-2.707	GTF2A1 GTF2A2
GATA6.p2	-2.728	GATA6
NR1H4.p2	-2.747	NR1H4
UUUUUGC	-2.798
POU1F1.p2	-2.885	POU1F1
EVI1.p2	-2.909	EVI1
TBX4,5.p2	-2.987	TBX5 TBX4
TFAP2{A,C}.p2	-3.013	TFAP2C TFAP2A
TLX1..3_NFIC{dimer}.p2	-3.050	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
REST.p3	-3.104	REST
POU5F1.p2	-3.411	POU5F1
TFCP2.p2	-3.886	TFCP2
HNF4A_NR2F1,2.p2	-3.939	NR2F1 NR2F2 HNF4A
GGCUCAG	-4.256
KLF12.p2	-4.481	KLF12
SMAD1..7,9.p2	-4.495	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HIC1.p2	-4.568	HIC1
TGIF1.p2	-4.685	TGIF1
MYOD1.p2	-5.173	MYOD1
RUNX1..3.p2	-5.227	RUNX1 RUNX3 RUNX2
CUCCCAA	-6.378

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Sample name: NCI60_1_OVCAR-3

Sorted z-values for every WM.