ISMARA results: NCI60_1

Sample name: NCI60_1_OVCAR-4

Sorted Z-values histogram for the sample NCI60_1_OVCAR-4

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
NRF1.p2	7.151	NRF1
ELF1,2,4.p2	6.710	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	6.546	NFYC NFYB NFYA
TFDP1.p2	6.491	TFDP1
YY1.p2	6.451	YY1
EHF.p2	6.444	EHF
E2F1..5.p2	5.396	E2F4 E2F5 E2F2 E2F1 E2F3
XBP1.p3	4.936	XBP1
ZNF143.p2	4.671	ZNF143
GGAAUGU	4.107
ELK1,4_GABP{A,B1}.p3	3.735	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ATF4.p2	3.615	ATF4
SP1.p2	3.299	SP1
MYB.p2	3.259	MYB
HIF1A.p2	3.204	HIF1A
bHLH_family.p2	3.122	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
IKZF1.p2	3.007	IKZF1
BPTF.p2	2.895	BPTF
GFI1.p2	2.667	GFI1
AAGGCAC	2.601
FOXD3.p2	2.490	FOXD3
GUAGUGU	2.481
SOX17.p2	2.447	SOX17
AGUGGUU	2.299
ESR1.p2	2.293	ESR1
AHR_ARNT_ARNT2.p2	2.286	ARNT AHR ARNT2
KLF4.p3	2.278	KLF4
HES1.p2	2.251	HES1
ZNF148.p2	2.250	ZNF148
ATF5_CREB3.p2	2.227	ATF5 CREB3
PAX5.p2	2.213	PAX5
NFE2L2.p2	2.143	NFE2L2
FOXN1.p2	2.110	FOXN1
UCAAGUA	2.082
BACH2.p2	2.076	BACH2
SPI1.p2	1.973	SPI1
SRF.p3	1.929	SRF
TEAD1.p2	1.889	TEAD1 TEAD2 TEAD3 TEAD4
UCCAGUU	1.853
NKX2-2,8.p2	1.678	NKX2-2 NKX2-8
GUGCAAA	1.598
PATZ1.p2	1.548	PATZ1
NR5A1,2.p2	1.498	NR5A1 NR5A2
NKX3-1.p2	1.484	NKX3-1
NR4A2.p2	1.362	NR4A2
CCAGUGU	1.317
SOX{8,9,10}.p2	1.301	SOX9 SOX8 SOX10
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.291	ARNT MAX MYC USF1 BHLHB2 ARNT2
SOX2.p2	1.250	SOX2
SOX5.p2	1.213	SOX5
FOS_FOS{B,L1}_JUN{B,D}.p2	1.182	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ACAGUAC	1.155
NKX3-2.p2	1.127	NKX3-2
AAGGUGC	0.936
UCACAGU	0.928
ZBTB16.p2	0.921	ZBTB16
SNAI1..3.p2	0.919	SNAI2 SNAI1 SNAI3
PBX1.p2	0.919	PBX1
GGAGUGU	0.843
ESRRA.p2	0.817	ESRRA
HOX{A4,D4}.p2	0.810	HOXA4 HOXD4
TP53.p2	0.794	TP53
CUUUGGU	0.776
CAGUGCA	0.772
EP300.p2	0.749	EP300
ACAGUAU	0.748
LEF1_TCF7_TCF7L1,2.p2	0.741	TCF7 TCF7L2 LEF1 TCF7L1
PRRX1,2.p2	0.740	PRRX2 PRRX1
UGCAUUG	0.738
CREB1.p2	0.737	CREB1
TFAP4.p2	0.723	TFAP4
AAUCUCA	0.705
TBP.p2	0.704	TBP
GUAACAG	0.678
LHX3,4.p2	0.645	LHX3 LHX4
STAT5{A,B}.p2	0.639	STAT5B STAT5A
SREBF1,2.p2	0.622	SREBF1 SREBF2
ARID5B.p2	0.592	ARID5B
RXRG_dimer.p3	0.545	NR1H2 RXRA PPARG PPARA RXRB RXRG
UCACAUU	0.537
AACCUGG	0.525
SPZ1.p2	0.524	SPZ1
HOX{A6,A7,B6,B7}.p2	0.487	HOXB6 HOXA7 HOXB7 HOXA6
LMO2.p2	0.478	LMO2
CRX.p2	0.416	CRX
UGACCUA	0.413
UUGGCAC	0.407
UUGGCAA	0.399
AGCUUAU	0.395
ONECUT1,2.p2	0.391	ONECUT2 ONECUT1
MTF1.p2	0.387	MTF1
HSF1,2.p2	0.318	HSF1 HSF2
ZEB1.p2	0.316	ZEB1
RBPJ.p2	0.313	RBPJ
CCUUCAU	0.273
GGACGGA	0.220
TLX2.p2	0.210	TLX2
CUX2.p2	0.202	CUX2
AGGUAGU	0.178
AAUGCCC	0.138
AACAGUC	0.124
AACCGUU	0.119
ACUGCAU	0.108
CUACAGU	0.084
STAT2,4,6.p2	0.082	STAT2 STAT4 STAT6
VSX1,2.p2	0.075	VSX2 VSX1
EWSR1-FLI1.p2	0.068	FLI1 EWSR1
ACCCGUA	0.044
PAX3,7.p2	0.035	PAX7 PAX3
UUGGUCC	-0.021
GCAGCAU	-0.025
GAUAUGU	-0.027
AUGUGCC	-0.035
GAUUGUC	-0.035
AAUCUCU	-0.042
ZNF384.p2	-0.048	ZNF384
CDC5L.p2	-0.055	CDC5L
UAAUGCU	-0.057
GFI1B.p2	-0.057	GFI1B
UUGUUCG	-0.064
HOXA9_MEIS1.p2	-0.081	MEIS1 HOXA9
ADNP_IRX_SIX_ZHX.p2	-0.098	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
NKX6-1,2.p2	-0.113	NKX6-1 NKX6-2
AACGGAA	-0.168
FOXO1,3,4.p2	-0.180	FOXO1 FOXO4 FOXO3
POU3F1..4.p2	-0.200	POU3F1 POU3F3 POU3F2 POU3F4
AGCAGCG	-0.220
PAX8.p2	-0.231	PAX8
GCUGGUG	-0.244
AACACUG	-0.244
ACUGGCC	-0.273
CEBPA,B_DDIT3.p2	-0.281	DDIT3 CEBPA CEBPB
DMAP1_NCOR{1,2}_SMARC.p2	-0.282	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AAGUGCU	-0.285
CGUACCG	-0.292
PAX4.p2	-0.322	PAX4
UGUGCGU	-0.327
HLF.p2	-0.330	HLF
AUGGCAC	-0.341
AAUACUG	-0.372
HMX1.p2	-0.377	HMX1
AUGACAC	-0.386
UUUUUGC	-0.390
NFATC1..3.p2	-0.395	NFATC3 NFATC2 NFATC1
RXR{A,B,G}.p2	-0.403	RXRA RXRB RXRG
UAAGACU	-0.404
GCUACAU	-0.409
T.p2	-0.410	T
FOX{I1,J2}.p2	-0.429	FOXI1 FOXJ2
GZF1.p2	-0.436	GZF1
UAAGACG	-0.464
NANOG.p2	-0.478	NANOG
AGCUGCC	-0.495
MAFB.p2	-0.497	MAFB
AGCACCA	-0.503
UGAAAUG	-0.504
FOXA2.p3	-0.509	FOXA2
ACCCUGU	-0.530
FOX{F1,F2,J1}.p2	-0.535	FOXF2 FOXJ1 FOXF1
RORA.p2	-0.539	RORA
GAUCAGA	-0.540
NFE2.p2	-0.545	NFE2
AUUGCAC	-0.547
NFIX.p2	-0.554	NFIX
PRDM1.p3	-0.560	PRDM1
PDX1.p2	-0.570	PDX1
CGUGUCU	-0.615
AGCAGCA	-0.632
TFEB.p2	-0.648	TFEB
GGCAAGA	-0.713
ZBTB6.p2	-0.736	ZBTB6
GAGAUGA	-0.747
STAT1,3.p3	-0.771	STAT1 STAT3
PAX6.p2	-0.776	PAX6
PITX1..3.p2	-0.780	PITX2 PITX3 PITX1
GAGAACU	-0.796
FOXQ1.p2	-0.797	FOXQ1
UGCAUAG	-0.819
PPARG.p2	-0.822	PPARG
ATF2.p2	-0.833	ATF2
POU6F1.p2	-0.879	POU6F1
MSX1,2.p2	-0.887	MSX1 MSX2
ATF6.p2	-0.902	ATF6
CDX1,2,4.p2	-0.914	CDX1 CDX2 CDX4
PAX2.p2	-0.917	PAX2
CTCF.p2	-0.928	CTCF
NFE2L1.p2	-0.932	NFE2L1
ZIC1..3.p2	-0.939	ZIC1 ZIC2 ZIC3
NKX2-1,4.p2	-0.955	NKX2-1 NKX2-4
ACAUUCA	-0.986
NFIL3.p2	-1.023	NFIL3
TLX1..3_NFIC{dimer}.p2	-1.041	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CCAGCAU	-1.063
GATA1..3.p2	-1.109	GATA1 GATA2 GATA3
ALX1.p2	-1.136	ALX1
NR6A1.p2	-1.156	NR6A1
AUGGCUU	-1.160
EOMES.p2	-1.164	EOMES
AGUGCAA	-1.187
DBP.p2	-1.223	DBP
MZF1.p2	-1.289	MZF1
HAND1,2.p2	-1.312	HAND1 HAND2
GATA6.p2	-1.314	GATA6
NKX2-3_NKX2-5.p2	-1.319	NKX2-5 NKX2-3
FOSL2.p2	-1.341	FOSL2
IKZF2.p2	-1.375	IKZF2
MEF2{A,B,C,D}.p2	-1.395	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GUCAGUU	-1.413
EN1,2.p2	-1.421	EN1 EN2
SRY.p2	-1.426	SRY
AR.p2	-1.463	AR
RXRA_VDR{dimer}.p2	-1.475	VDR	$logo of RXRA_VDR{dimer}.p2$
UAUUGCU	-1.478
HOX{A5,B5}.p2	-1.498	HOXB5 HOXA5
IRF1,2,7.p3	-1.537	IRF1 IRF2 IRF7
ZNF238.p2	-1.555	ZNF238
HBP1_HMGB_SSRP1_UBTF.p2	-1.580	HMGB2 HMGB3 SSRP1 UBTF HBP1
FOXP3.p2	-1.632	FOXP3
TFAP2B.p2	-1.636	TFAP2B
POU2F1..3.p2	-1.651	POU2F2 POU2F1 POU2F3
AIRE.p2	-1.681	AIRE
FOXL1.p2	-1.710	FOXL1
HMGA1,2.p2	-1.812	HMGA1 HMGA2
EGR1..3.p2	-1.815	EGR3 EGR1 EGR2
CACAGUG	-1.844
TAL1_TCF{3,4,12}.p2	-1.871	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NANOG{mouse}.p2	-1.930	NANOG
HNF1A.p2	-1.932	HNF1A
GAGGUAG	-1.954
NFKB1_REL_RELA.p2	-1.964	RELA REL NFKB1
JUN.p2	-1.988	JUN JUND JUNB
POU1F1.p2	-1.992	POU1F1
TFAP2{A,C}.p2	-1.995	TFAP2C TFAP2A
MYBL2.p2	-2.015	MYBL2
POU5F1_SOX2{dimer}.p2	-2.090	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
EVI1.p2	-2.098	EVI1
NR3C1.p2	-2.107	NR3C1
GLI1..3.p2	-2.136	GLI1 GLI2 GLI3
AAAGUGC	-2.187
CAGCAGG	-2.217
UGUGCUU	-2.224
FOX{C1,C2}.p2	-2.297	FOXC1 FOXC2
TCF4_dimer.p2	-2.320	TCF4
GTF2A1,2.p2	-2.366	GTF2A1 GTF2A2
NHLH1,2.p2	-2.397	NHLH1 NHLH2
SPIB.p2	-2.408	SPIB
GUAAACA	-2.417
GGAAGAC	-2.502
ETS1,2.p2	-2.515	ETS2 ETS1
GGCAGUG	-2.556
TFCP2.p2	-2.561	TFCP2
UCCCUUU	-2.579
GGCUCAG	-2.602
TBX4,5.p2	-2.728	TBX5 TBX4
GTF2I.p2	-2.739	GTF2I
ZNF423.p2	-2.745	ZNF423
HIC1.p2	-2.795	HIC1
EBF1.p2	-2.860	EBF1
MYFfamily.p2	-2.952	MYOD1 MYF6 MYF5 MYOG
CCCUGAG	-3.070
MYOD1.p2	-3.090	MYOD1
RREB1.p2	-3.116	RREB1
REST.p3	-3.149	REST
POU5F1.p2	-3.150	POU5F1
FOX{D1,D2}.p2	-3.231	FOXD2 FOXD1
KLF12.p2	-3.274	KLF12
HNF4A_NR2F1,2.p2	-3.390	NR2F1 NR2F2 HNF4A
FEV.p2	-3.591	FEV
ZFP161.p2	-3.825	ZFP161
NR1H4.p2	-3.830	NR1H4
TGIF1.p2	-4.135	TGIF1
SMAD1..7,9.p2	-4.161	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
RFX1..5_RFXANK_RFXAP.p2	-4.176	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CUCCCAA	-4.258
RUNX1..3.p2	-4.431	RUNX1 RUNX3 RUNX2
MAZ.p2	-4.748	MAZ

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Sample name: NCI60_1_OVCAR-4

Sorted z-values for every WM.