ISMARA results: NCI60_1

Sample name: NCI60_1_PC-3

Sorted Z-values histogram for the sample NCI60_1_PC-3

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	9.106	YY1
NRF1.p2	8.821	NRF1
ZNF143.p2	7.425	ZNF143
ELK1,4_GABP{A,B1}.p3	6.136	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
E2F1..5.p2	5.908	E2F4 E2F5 E2F2 E2F1 E2F3
HIF1A.p2	5.513	HIF1A
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	5.499	ARNT MAX MYC USF1 BHLHB2 ARNT2
EHF.p2	5.391	EHF
bHLH_family.p2	4.856	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NFY{A,B,C}.p2	4.834	NFYC NFYB NFYA
KLF4.p3	4.799	KLF4
ELF1,2,4.p2	4.445	ELF2 ELF1 ELF4
GGAAUGU	3.876
TFDP1.p2	3.741	TFDP1
ESRRA.p2	3.590	ESRRA
MYB.p2	3.533	MYB
FOXD3.p2	3.182	FOXD3
XBP1.p3	3.037	XBP1
EP300.p2	3.035	EP300
ATF5_CREB3.p2	2.844	ATF5 CREB3
FOS_FOS{B,L1}_JUN{B,D}.p2	2.578	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
BACH2.p2	2.557	BACH2
ATF4.p2	2.409	ATF4
FOXA2.p3	2.326	FOXA2
BPTF.p2	2.225	BPTF
SP1.p2	2.045	SP1
SOX17.p2	2.015	SOX17
FOXN1.p2	1.964	FOXN1
ZNF148.p2	1.775	ZNF148
NFE2L1.p2	1.687	NFE2L1
TFAP2{A,C}.p2	1.684	TFAP2C TFAP2A
AHR_ARNT_ARNT2.p2	1.677	ARNT AHR ARNT2
PBX1.p2	1.627	PBX1
UCAAGUA	1.557
UCCAGUU	1.508
ACAGUAU	1.494
SPIB.p2	1.404	SPIB
AGUGGUU	1.369
HES1.p2	1.329	HES1
CTCF.p2	1.313	CTCF
AAGGCAC	1.290
GUAGUGU	1.286
GCAGCAU	1.204
PRRX1,2.p2	1.201	PRRX2 PRRX1
NFE2.p2	1.162	NFE2
FOXQ1.p2	1.150	FOXQ1
NKX2-2,8.p2	1.146	NKX2-2 NKX2-8
AAGUGCU	1.099
GUAACAG	1.077
GGAGUGU	1.074
GCUGGUG	1.063
NR6A1.p2	1.058	NR6A1
UUGGUCC	1.022
GFI1.p2	1.021	GFI1
TP53.p2	1.002	TP53
NR4A2.p2	0.947	NR4A2
SOX{8,9,10}.p2	0.916	SOX9 SOX8 SOX10
NKX3-1.p2	0.854	NKX3-1
UCACAUU	0.836
HMX1.p2	0.828	HMX1
UUGUUCG	0.789
SOX2.p2	0.772	SOX2
NFE2L2.p2	0.765	NFE2L2
CCAGUGU	0.762
ZEB1.p2	0.725	ZEB1
NHLH1,2.p2	0.708	NHLH1 NHLH2
CUUUGGU	0.669
ACAGUAC	0.634
MAFB.p2	0.588	MAFB
ACUGCAU	0.584
UUGGCAA	0.543
PDX1.p2	0.512	PDX1
RXRG_dimer.p3	0.497	NR1H2 RXRA PPARG PPARA RXRB RXRG
TFAP2B.p2	0.448	TFAP2B
CREB1.p2	0.412	CREB1
AACCUGG	0.387
GFI1B.p2	0.368	GFI1B
CCUUCAU	0.365
ADNP_IRX_SIX_ZHX.p2	0.359	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ACUGGCC	0.358
NKX3-2.p2	0.351	NKX3-2
ARID5B.p2	0.330	ARID5B
UGAAAUG	0.329
UGCAUUG	0.323
PITX1..3.p2	0.316	PITX2 PITX3 PITX1
AACCGUU	0.306
NFIX.p2	0.297	NFIX
TFAP4.p2	0.271	TFAP4
UCACAGU	0.246
AACGGAA	0.232
GCUACAU	0.206
AACAGUC	0.180
GUAAACA	0.174
SOX5.p2	0.174	SOX5
ZNF384.p2	0.170	ZNF384
CAGUGCA	0.146
GAUAUGU	0.131
ACCCGUA	0.125
ZNF238.p2	0.102	ZNF238
PAX5.p2	0.087	PAX5
IKZF1.p2	0.073	IKZF1
HSF1,2.p2	0.057	HSF1 HSF2
EOMES.p2	0.054	EOMES
GAUCAGA	0.050
ZBTB16.p2	0.047	ZBTB16
PAX6.p2	0.033	PAX6
POU6F1.p2	0.031	POU6F1
GZF1.p2	0.027	GZF1
NR5A1,2.p2	-0.011	NR5A1 NR5A2
CGUGUCU	-0.027
AGGUAGU	-0.029
GGACGGA	-0.043
ONECUT1,2.p2	-0.055	ONECUT2 ONECUT1
AAUCUCA	-0.056
HOX{A6,A7,B6,B7}.p2	-0.059	HOXB6 HOXA7 HOXB7 HOXA6
CACAGUG	-0.076
HMGA1,2.p2	-0.077	HMGA1 HMGA2
TBP.p2	-0.088	TBP
TLX2.p2	-0.137	TLX2
UAAGACG	-0.143
GGCAGUG	-0.145
NKX6-1,2.p2	-0.156	NKX6-1 NKX6-2
NFIL3.p2	-0.189	NFIL3
UGACCUA	-0.202
ACCCUGU	-0.215
PAX3,7.p2	-0.222	PAX7 PAX3
ZBTB6.p2	-0.233	ZBTB6
FOX{F1,F2,J1}.p2	-0.254	FOXF2 FOXJ1 FOXF1
AAUGCCC	-0.256
AACACUG	-0.266
HOXA9_MEIS1.p2	-0.267	MEIS1 HOXA9
CRX.p2	-0.268	CRX
ATF2.p2	-0.269	ATF2
AUGGCAC	-0.292
CUACAGU	-0.294
LHX3,4.p2	-0.300	LHX3 LHX4
VSX1,2.p2	-0.303	VSX2 VSX1
ESR1.p2	-0.316	ESR1
TEAD1.p2	-0.317	TEAD1 TEAD2 TEAD3 TEAD4
EWSR1-FLI1.p2	-0.334	FLI1 EWSR1
PAX8.p2	-0.341	PAX8
UAUUGCU	-0.372
AUGACAC	-0.385
RBPJ.p2	-0.387	RBPJ
LMO2.p2	-0.388	LMO2
FOXO1,3,4.p2	-0.397	FOXO1 FOXO4 FOXO3
UGUGCGU	-0.402
AGCUUAU	-0.433
IKZF2.p2	-0.436	IKZF2
AUGUGCC	-0.441
TFEB.p2	-0.448	TFEB
CUX2.p2	-0.475	CUX2
AUGGCUU	-0.486
GGCAAGA	-0.503
FOX{I1,J2}.p2	-0.517	FOXI1 FOXJ2
STAT5{A,B}.p2	-0.525	STAT5B STAT5A
AAUCUCU	-0.534
NANOG.p2	-0.536	NANOG
GUGCAAA	-0.550
GUCAGUU	-0.570
CEBPA,B_DDIT3.p2	-0.583	DDIT3 CEBPA CEBPB
MYBL2.p2	-0.660	MYBL2
HOX{A4,D4}.p2	-0.669	HOXA4 HOXD4
AAUACUG	-0.705
AGUGCAA	-0.716
CGUACCG	-0.720
NKX2-3_NKX2-5.p2	-0.727	NKX2-5 NKX2-3
SRY.p2	-0.757	SRY
HNF1A.p2	-0.776	HNF1A
PAX2.p2	-0.777	PAX2
POU5F1_SOX2{dimer}.p2	-0.782	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
SRF.p3	-0.792	SRF
AGCAGCA	-0.793
PATZ1.p2	-0.808	PATZ1
UAAGACU	-0.825
JUN.p2	-0.869	JUN JUND JUNB
AUUGCAC	-0.898
ZIC1..3.p2	-0.899	ZIC1 ZIC2 ZIC3
AAGGUGC	-0.951
HLF.p2	-0.955	HLF
AGCAGCG	-0.995
NFKB1_REL_RELA.p2	-1.028	RELA REL NFKB1
RXR{A,B,G}.p2	-1.028	RXRA RXRB RXRG
CDX1,2,4.p2	-1.061	CDX1 CDX2 CDX4
NFATC1..3.p2	-1.112	NFATC3 NFATC2 NFATC1
GAUUGUC	-1.121
GATA1..3.p2	-1.135	GATA1 GATA2 GATA3
UCCCUUU	-1.138
RFX1..5_RFXANK_RFXAP.p2	-1.139	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MZF1.p2	-1.144	MZF1
UUGGCAC	-1.186
PAX4.p2	-1.214	PAX4
UAAUGCU	-1.228
PPARG.p2	-1.254	PPARG
DMAP1_NCOR{1,2}_SMARC.p2	-1.260	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
RORA.p2	-1.275	RORA
AGCACCA	-1.323
RXRA_VDR{dimer}.p2	-1.379	VDR	$logo of RXRA_VDR{dimer}.p2$
CAGCAGG	-1.412
GLI1..3.p2	-1.419	GLI1 GLI2 GLI3
CCAGCAU	-1.419
SPZ1.p2	-1.420	SPZ1
FOX{C1,C2}.p2	-1.427	FOXC1 FOXC2
GAGAACU	-1.432
POU1F1.p2	-1.438	POU1F1
NKX2-1,4.p2	-1.443	NKX2-1 NKX2-4
LEF1_TCF7_TCF7L1,2.p2	-1.520	TCF7 TCF7L2 LEF1 TCF7L1
POU3F1..4.p2	-1.552	POU3F1 POU3F3 POU3F2 POU3F4
STAT2,4,6.p2	-1.577	STAT2 STAT4 STAT6
ATF6.p2	-1.585	ATF6
GAGAUGA	-1.596
AR.p2	-1.599	AR
EN1,2.p2	-1.606	EN1 EN2
PRDM1.p3	-1.635	PRDM1
ZFP161.p2	-1.654	ZFP161
GGAAGAC	-1.660
T.p2	-1.677	T
HOX{A5,B5}.p2	-1.686	HOXB5 HOXA5
CDC5L.p2	-1.759	CDC5L
UGUGCUU	-1.766
AGCUGCC	-1.779
POU2F1..3.p2	-1.794	POU2F2 POU2F1 POU2F3
ALX1.p2	-1.807	ALX1
NR3C1.p2	-1.825	NR3C1
MEF2{A,B,C,D}.p2	-1.827	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GTF2A1,2.p2	-1.835	GTF2A1 GTF2A2
AIRE.p2	-1.856	AIRE
ZNF423.p2	-1.856	ZNF423
MSX1,2.p2	-1.921	MSX1 MSX2
RREB1.p2	-1.927	RREB1
GATA6.p2	-1.933	GATA6
UGCAUAG	-1.965
TLX1..3_NFIC{dimer}.p2	-1.973	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
EGR1..3.p2	-2.030	EGR3 EGR1 EGR2
TAL1_TCF{3,4,12}.p2	-2.058	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
ACAUUCA	-2.110
FOSL2.p2	-2.228	FOSL2
SPI1.p2	-2.247	SPI1
UUUUUGC	-2.250
HBP1_HMGB_SSRP1_UBTF.p2	-2.270	HMGB2 HMGB3 SSRP1 UBTF HBP1
MTF1.p2	-2.313	MTF1
HIC1.p2	-2.321	HIC1
SNAI1..3.p2	-2.333	SNAI2 SNAI1 SNAI3
TBX4,5.p2	-2.352	TBX5 TBX4
NR1H4.p2	-2.389	NR1H4
GTF2I.p2	-2.440	GTF2I
NANOG{mouse}.p2	-2.530	NANOG
DBP.p2	-2.541	DBP
FOXL1.p2	-2.598	FOXL1
CCCUGAG	-2.650
EBF1.p2	-2.710	EBF1
TCF4_dimer.p2	-2.747	TCF4
FOX{D1,D2}.p2	-2.831	FOXD2 FOXD1
STAT1,3.p3	-2.883	STAT1 STAT3
POU5F1.p2	-3.006	POU5F1
HNF4A_NR2F1,2.p2	-3.063	NR2F1 NR2F2 HNF4A
REST.p3	-3.089	REST
CUCCCAA	-3.239
MYOD1.p2	-3.344	MYOD1
AAAGUGC	-3.443
KLF12.p2	-3.504	KLF12
SMAD1..7,9.p2	-3.518	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ETS1,2.p2	-3.538	ETS2 ETS1
TGIF1.p2	-3.660	TGIF1
FOXP3.p2	-3.698	FOXP3
GGCUCAG	-3.718
TFCP2.p2	-3.740	TFCP2
GAGGUAG	-3.762
IRF1,2,7.p3	-4.066	IRF1 IRF2 IRF7
SREBF1,2.p2	-4.080	SREBF1 SREBF2
FEV.p2	-4.152	FEV
MYFfamily.p2	-4.173	MYOD1 MYF6 MYF5 MYOG
HAND1,2.p2	-4.296	HAND1 HAND2
RUNX1..3.p2	-4.309	RUNX1 RUNX3 RUNX2
EVI1.p2	-4.764	EVI1
MAZ.p2	-4.858	MAZ

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Sample name: NCI60_1_PC-3

Sorted z-values for every WM.