ISMARA results: NCI60_1

Sample name: NCI60_1_RXF-393

Sorted Z-values histogram for the sample NCI60_1_RXF-393

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
IRF1,2,7.p3	8.236	IRF1 IRF2 IRF7
ELF1,2,4.p2	5.805	ELF2 ELF1 ELF4
XBP1.p3	5.364	XBP1
E2F1..5.p2	5.290	E2F4 E2F5 E2F2 E2F1 E2F3
TFDP1.p2	4.915	TFDP1
HIF1A.p2	4.809	HIF1A
GGAAUGU	4.133
PAX5.p2	3.542	PAX5
UCCAGUU	3.145
ELK1,4_GABP{A,B1}.p3	2.977	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
YY1.p2	2.936	YY1
KLF4.p3	2.925	KLF4
MYB.p2	2.885	MYB
SRF.p3	2.740	SRF
ZNF143.p2	2.728	ZNF143
ATF5_CREB3.p2	2.714	ATF5 CREB3
EHF.p2	2.713	EHF
HOX{A6,A7,B6,B7}.p2	2.700	HOXB6 HOXA7 HOXB7 HOXA6
SOX17.p2	2.674	SOX17
AHR_ARNT_ARNT2.p2	2.662	ARNT AHR ARNT2
bHLH_family.p2	2.636	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NFY{A,B,C}.p2	2.567	NFYC NFYB NFYA
NRF1.p2	2.385	NRF1
ZBTB16.p2	2.338	ZBTB16
UCACAUU	2.320
ATF4.p2	2.310	ATF4
FOXQ1.p2	2.247	FOXQ1
BACH2.p2	2.206	BACH2
UUGGCAA	2.176
AGUGGUU	2.155
GUAGUGU	2.146
EP300.p2	2.137	EP300
NKX2-2,8.p2	2.078	NKX2-2 NKX2-8
HSF1,2.p2	1.961	HSF1 HSF2
NFKB1_REL_RELA.p2	1.922	RELA REL NFKB1
FOXN1.p2	1.922	FOXN1
GUGCAAA	1.906
RXRG_dimer.p3	1.882	NR1H2 RXRA PPARG PPARA RXRB RXRG
AGCACCA	1.874
AAGGCAC	1.870
FOXD3.p2	1.804	FOXD3
UUUUUGC	1.736
FOS_FOS{B,L1}_JUN{B,D}.p2	1.655	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AUUGCAC	1.603
UCAAGUA	1.602
GCAGCAU	1.546
PBX1.p2	1.497	PBX1
AUGGCAC	1.475
AACCUGG	1.466
CCAGUGU	1.392
CUUUGGU	1.389
AAUACUG	1.339
TFAP2B.p2	1.325	TFAP2B
NKX3-2.p2	1.325	NKX3-2
UGAAAUG	1.282
TFAP2{A,C}.p2	1.269	TFAP2C TFAP2A
ATF6.p2	1.177	ATF6
NFE2L2.p2	1.141	NFE2L2
GUAAACA	1.068
TEAD1.p2	0.988	TEAD1 TEAD2 TEAD3 TEAD4
AAUGCCC	0.986
NKX6-1,2.p2	0.977	NKX6-1 NKX6-2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	0.973	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZBTB6.p2	0.947	ZBTB6
ESR1.p2	0.887	ESR1
BPTF.p2	0.884	BPTF
UCACAGU	0.883
STAT2,4,6.p2	0.877	STAT2 STAT4 STAT6
ACAGUAU	0.827
ZNF148.p2	0.823	ZNF148
AACGGAA	0.784
GFI1B.p2	0.745	GFI1B
NR6A1.p2	0.729	NR6A1
NFATC1..3.p2	0.728	NFATC3 NFATC2 NFATC1
PRRX1,2.p2	0.725	PRRX2 PRRX1
PRDM1.p3	0.710	PRDM1
UUGGUCC	0.709
UUGUUCG	0.688
MZF1.p2	0.657	MZF1
DMAP1_NCOR{1,2}_SMARC.p2	0.626	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GCUACAU	0.625
GAUAUGU	0.577
ARID5B.p2	0.540	ARID5B
RXR{A,B,G}.p2	0.502	RXRA RXRB RXRG
AACAGUC	0.492
SPI1.p2	0.482	SPI1
NFE2L1.p2	0.473	NFE2L1
RBPJ.p2	0.433	RBPJ
CDX1,2,4.p2	0.423	CDX1 CDX2 CDX4
TFEB.p2	0.407	TFEB
ZIC1..3.p2	0.401	ZIC1 ZIC2 ZIC3
CTCF.p2	0.375	CTCF
SOX{8,9,10}.p2	0.340	SOX9 SOX8 SOX10
AUGACAC	0.328
AUGUGCC	0.324
AACCGUU	0.312
ACUGCAU	0.306
GUCAGUU	0.305
ZNF384.p2	0.297	ZNF384
UGCAUUG	0.288
CAGUGCA	0.216
IKZF2.p2	0.199	IKZF2
GAGAACU	0.195
CUACAGU	0.194
HOXA9_MEIS1.p2	0.192	MEIS1 HOXA9
HBP1_HMGB_SSRP1_UBTF.p2	0.187	HMGB2 HMGB3 SSRP1 UBTF HBP1
SP1.p2	0.152	SP1
NFE2.p2	0.136	NFE2
UAAUGCU	0.128
TP53.p2	0.125	TP53
LHX3,4.p2	0.123	LHX3 LHX4
UGACCUA	0.102
CREB1.p2	0.096	CREB1
ADNP_IRX_SIX_ZHX.p2	0.073	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CGUACCG	0.063
ACCCGUA	0.061
ESRRA.p2	0.049	ESRRA
TFAP4.p2	0.037	TFAP4
AGGUAGU	0.016
EWSR1-FLI1.p2	0.009	FLI1 EWSR1
CCUUCAU	0.005
MAFB.p2	0.001	MAFB
AAUCUCA	-0.014
GUAACAG	-0.073
VSX1,2.p2	-0.119	VSX2 VSX1
GGAGUGU	-0.122
PAX3,7.p2	-0.123	PAX7 PAX3
PAX4.p2	-0.126	PAX4
MSX1,2.p2	-0.130	MSX1 MSX2
SOX2.p2	-0.146	SOX2
PATZ1.p2	-0.147	PATZ1
AGUGCAA	-0.151
GZF1.p2	-0.154	GZF1
MTF1.p2	-0.156	MTF1
GFI1.p2	-0.163	GFI1
GCUGGUG	-0.186
CRX.p2	-0.191	CRX
ACUGGCC	-0.199
CUX2.p2	-0.215	CUX2
AGCUUAU	-0.221
PAX8.p2	-0.225	PAX8
CEBPA,B_DDIT3.p2	-0.264	DDIT3 CEBPA CEBPB
UUGGCAC	-0.269
UGCAUAG	-0.299
ACAUUCA	-0.309
SREBF1,2.p2	-0.315	SREBF1 SREBF2
ONECUT1,2.p2	-0.326	ONECUT2 ONECUT1
PDX1.p2	-0.376	PDX1
GGACGGA	-0.385
ZNF238.p2	-0.388	ZNF238
AAGUGCU	-0.402
AGCAGCG	-0.426
NKX3-1.p2	-0.440	NKX3-1
POU3F1..4.p2	-0.443	POU3F1 POU3F3 POU3F2 POU3F4
ACCCUGU	-0.513
ACAGUAC	-0.532
UGUGCGU	-0.546
TLX1..3_NFIC{dimer}.p2	-0.566	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
T.p2	-0.603	T
LMO2.p2	-0.620	LMO2
FOX{I1,J2}.p2	-0.620	FOXI1 FOXJ2
DBP.p2	-0.626	DBP
HMGA1,2.p2	-0.652	HMGA1 HMGA2
CGUGUCU	-0.673
PAX6.p2	-0.693	PAX6
TAL1_TCF{3,4,12}.p2	-0.710	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GGCAAGA	-0.742
POU5F1_SOX2{dimer}.p2	-0.760	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
SPIB.p2	-0.778	SPIB
HMX1.p2	-0.780	HMX1
AAUCUCU	-0.799
GAUCAGA	-0.856
TBP.p2	-0.856	TBP
AACACUG	-0.866
SRY.p2	-0.912	SRY
NHLH1,2.p2	-0.929	NHLH1 NHLH2
HLF.p2	-0.929	HLF
PITX1..3.p2	-0.945	PITX2 PITX3 PITX1
HOX{A4,D4}.p2	-0.949	HOXA4 HOXD4
CCAGCAU	-0.951
GGAAGAC	-0.974
PPARG.p2	-0.974	PPARG
STAT5{A,B}.p2	-0.975	STAT5B STAT5A
EOMES.p2	-0.978	EOMES
EBF1.p2	-0.982	EBF1
AUGGCUU	-0.998
POU6F1.p2	-1.013	POU6F1
NFIX.p2	-1.034	NFIX
AAAGUGC	-1.042
AGCUGCC	-1.043
UAAGACU	-1.045
ATF2.p2	-1.061	ATF2
ZEB1.p2	-1.078	ZEB1
ALX1.p2	-1.079	ALX1
FOX{C1,C2}.p2	-1.149	FOXC1 FOXC2
NR4A2.p2	-1.158	NR4A2
AAGGUGC	-1.165
MYBL2.p2	-1.175	MYBL2
ZNF423.p2	-1.176	ZNF423
SOX5.p2	-1.196	SOX5
FOXO1,3,4.p2	-1.199	FOXO1 FOXO4 FOXO3
SPZ1.p2	-1.201	SPZ1
HES1.p2	-1.215	HES1
LEF1_TCF7_TCF7L1,2.p2	-1.221	TCF7 TCF7L2 LEF1 TCF7L1
UAAGACG	-1.239
GAGAUGA	-1.262
ETS1,2.p2	-1.270	ETS2 ETS1
IKZF1.p2	-1.303	IKZF1
RORA.p2	-1.315	RORA
GAGGUAG	-1.411
GAUUGUC	-1.451
EGR1..3.p2	-1.451	EGR3 EGR1 EGR2
NKX2-3_NKX2-5.p2	-1.490	NKX2-5 NKX2-3
FOX{D1,D2}.p2	-1.499	FOXD2 FOXD1
CACAGUG	-1.513
HNF1A.p2	-1.518	HNF1A
NFIL3.p2	-1.534	NFIL3
NKX2-1,4.p2	-1.553	NKX2-1 NKX2-4
FOX{F1,F2,J1}.p2	-1.574	FOXF2 FOXJ1 FOXF1
MEF2{A,B,C,D}.p2	-1.595	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
STAT1,3.p3	-1.612	STAT1 STAT3
TLX2.p2	-1.615	TLX2
GTF2I.p2	-1.624	GTF2I
MYFfamily.p2	-1.633	MYOD1 MYF6 MYF5 MYOG
UGUGCUU	-1.638
FOXA2.p3	-1.642	FOXA2
GGCAGUG	-1.677
FOSL2.p2	-1.682	FOSL2
AR.p2	-1.706	AR
FOXP3.p2	-1.710	FOXP3
JUN.p2	-1.743	JUN JUND JUNB
TFCP2.p2	-1.860	TFCP2
AGCAGCA	-1.890
GATA1..3.p2	-1.996	GATA1 GATA2 GATA3
POU5F1.p2	-2.030	POU5F1
FOXL1.p2	-2.054	FOXL1
HOX{A5,B5}.p2	-2.091	HOXB5 HOXA5
AIRE.p2	-2.151	AIRE
NR3C1.p2	-2.173	NR3C1
UCCCUUU	-2.215
GTF2A1,2.p2	-2.218	GTF2A1 GTF2A2
ZFP161.p2	-2.267	ZFP161
CDC5L.p2	-2.288	CDC5L
NANOG.p2	-2.408	NANOG
RUNX1..3.p2	-2.464	RUNX1 RUNX3 RUNX2
RXRA_VDR{dimer}.p2	-2.471	VDR	$logo of RXRA_VDR{dimer}.p2$
MAZ.p2	-2.485	MAZ
PAX2.p2	-2.545	PAX2
UAUUGCU	-2.589
EN1,2.p2	-2.667	EN1 EN2
CUCCCAA	-2.865
TCF4_dimer.p2	-2.902	TCF4
NANOG{mouse}.p2	-2.926	NANOG
NR5A1,2.p2	-2.965	NR5A1 NR5A2
TGIF1.p2	-2.991	TGIF1
POU1F1.p2	-2.992	POU1F1
HAND1,2.p2	-3.094	HAND1 HAND2
REST.p3	-3.120	REST
GATA6.p2	-3.187	GATA6
GLI1..3.p2	-3.242	GLI1 GLI2 GLI3
CAGCAGG	-3.246
FEV.p2	-3.400	FEV
MYOD1.p2	-3.424	MYOD1
HIC1.p2	-3.458	HIC1
SMAD1..7,9.p2	-3.505	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TBX4,5.p2	-3.511	TBX5 TBX4
RREB1.p2	-3.620	RREB1
GGCUCAG	-3.636
EVI1.p2	-3.780	EVI1
CCCUGAG	-4.030
NR1H4.p2	-4.077	NR1H4
POU2F1..3.p2	-4.232	POU2F2 POU2F1 POU2F3
HNF4A_NR2F1,2.p2	-4.300	NR2F1 NR2F2 HNF4A
SNAI1..3.p2	-4.468	SNAI2 SNAI1 SNAI3
RFX1..5_RFXANK_RFXAP.p2	-5.917	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
KLF12.p2	-6.854	KLF12

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Sample name: NCI60_1_RXF-393

Sorted z-values for every WM.