ISMARA results: NCI60_1

Sample name: NCI60_1_SF-539

Sorted Z-values histogram for the sample NCI60_1_SF-539

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
XBP1.p3	9.161	XBP1
ELF1,2,4.p2	6.018	ELF2 ELF1 ELF4
ELK1,4_GABP{A,B1}.p3	5.934	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NFY{A,B,C}.p2	5.873	NFYC NFYB NFYA
YY1.p2	5.661	YY1
NRF1.p2	5.410	NRF1
TFDP1.p2	4.850	TFDP1
ATF5_CREB3.p2	4.741	ATF5 CREB3
AGCACCA	4.721
HIF1A.p2	4.442	HIF1A
GGAAUGU	4.357
E2F1..5.p2	4.181	E2F4 E2F5 E2F2 E2F1 E2F3
ZNF143.p2	3.931	ZNF143
MYB.p2	3.767	MYB
ATF4.p2	3.731	ATF4
SRF.p3	3.379	SRF
ZNF238.p2	2.979	ZNF238
TFAP2B.p2	2.880	TFAP2B
GUGCAAA	2.742
AAUACUG	2.704
EHF.p2	2.590	EHF
NFATC1..3.p2	2.587	NFATC3 NFATC2 NFATC1
AGUGGUU	2.584
AAGGCAC	2.496
TFAP4.p2	2.258	TFAP4
SOX17.p2	2.206	SOX17
CUUUGGU	2.196
bHLH_family.p2	2.156	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
BACH2.p2	2.106	BACH2
KLF4.p3	2.063	KLF4
FOXN1.p2	2.059	FOXN1
GUAAACA	1.977
ESRRA.p2	1.966	ESRRA
ATF6.p2	1.838	ATF6
ZNF384.p2	1.791	ZNF384
PRRX1,2.p2	1.760	PRRX2 PRRX1
PAX5.p2	1.738	PAX5
UUGGCAA	1.725
BPTF.p2	1.683	BPTF
PBX1.p2	1.638	PBX1
UCCAGUU	1.550
FOXD3.p2	1.536	FOXD3
NKX6-1,2.p2	1.510	NKX6-1 NKX6-2
PRDM1.p3	1.496	PRDM1
UCAAGUA	1.493
ZNF148.p2	1.435	ZNF148
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.397	ARNT MAX MYC USF1 BHLHB2 ARNT2
HOX{A6,A7,B6,B7}.p2	1.274	HOXB6 HOXA7 HOXB7 HOXA6
GFI1.p2	1.267	GFI1
EGR1..3.p2	1.256	EGR3 EGR1 EGR2
HOX{A4,D4}.p2	1.220	HOXA4 HOXD4
TFEB.p2	1.215	TFEB
CDX1,2,4.p2	1.211	CDX1 CDX2 CDX4
UCACAUU	1.159
AAUGCCC	1.158
NFE2.p2	1.158	NFE2
AACCUGG	1.085
UUGGUCC	1.085
TEAD1.p2	1.068	TEAD1 TEAD2 TEAD3 TEAD4
IRF1,2,7.p3	1.031	IRF1 IRF2 IRF7
AACACUG	1.026
AACAGUC	1.003
TLX2.p2	0.993	TLX2
ACAGUAC	0.991
STAT2,4,6.p2	0.986	STAT2 STAT4 STAT6
AUGGCAC	0.982
AAGGUGC	0.973
RXRG_dimer.p3	0.955	NR1H2 RXRA PPARG PPARA RXRB RXRG
NKX2-2,8.p2	0.949	NKX2-2 NKX2-8
FOXQ1.p2	0.947	FOXQ1
EP300.p2	0.939	EP300
GUAGUGU	0.859
ARID5B.p2	0.832	ARID5B
GCAGCAU	0.811
AACGGAA	0.795
ESR1.p2	0.763	ESR1
ZBTB16.p2	0.757	ZBTB16
MAFB.p2	0.742	MAFB
RXR{A,B,G}.p2	0.739	RXRA RXRB RXRG
NFE2L1.p2	0.694	NFE2L1
LEF1_TCF7_TCF7L1,2.p2	0.672	TCF7 TCF7L2 LEF1 TCF7L1
HSF1,2.p2	0.669	HSF1 HSF2
SREBF1,2.p2	0.663	SREBF1 SREBF2
ADNP_IRX_SIX_ZHX.p2	0.652	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
SP1.p2	0.638	SP1
HES1.p2	0.603	HES1
FOXL1.p2	0.587	FOXL1
FOS_FOS{B,L1}_JUN{B,D}.p2	0.580	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
CCUUCAU	0.551
VSX1,2.p2	0.547	VSX2 VSX1
ZBTB6.p2	0.535	ZBTB6
IKZF2.p2	0.532	IKZF2
ACAGUAU	0.517
SOX{8,9,10}.p2	0.480	SOX9 SOX8 SOX10
NFE2L2.p2	0.457	NFE2L2
UGACCUA	0.450
CGUACCG	0.441
ACUGCAU	0.421
NKX3-2.p2	0.385	NKX3-2
AUUGCAC	0.359
TFAP2{A,C}.p2	0.336	TFAP2C TFAP2A
CREB1.p2	0.290	CREB1
AUGUGCC	0.282
GCUACAU	0.268
FOXO1,3,4.p2	0.254	FOXO1 FOXO4 FOXO3
UCACAGU	0.238
AAUCUCA	0.228
CEBPA,B_DDIT3.p2	0.225	DDIT3 CEBPA CEBPB
GAUAUGU	0.211
NHLH1,2.p2	0.199	NHLH1 NHLH2
MAZ.p2	0.144	MAZ
SOX2.p2	0.139	SOX2
AACCGUU	0.125
PAX4.p2	0.119	PAX4
GATA1..3.p2	0.116	GATA1 GATA2 GATA3
GZF1.p2	0.114	GZF1
POU3F1..4.p2	0.114	POU3F1 POU3F3 POU3F2 POU3F4
STAT5{A,B}.p2	0.090	STAT5B STAT5A
RBPJ.p2	0.044	RBPJ
SPI1.p2	0.039	SPI1
ACCCGUA	0.013
CUX2.p2	-0.015	CUX2
GGAGUGU	-0.033
ACCCUGU	-0.034
GGCAAGA	-0.059
GUCAGUU	-0.062
UAAUGCU	-0.065
GFI1B.p2	-0.066	GFI1B
FOSL2.p2	-0.096	FOSL2
SPIB.p2	-0.100	SPIB
NR6A1.p2	-0.114	NR6A1
AGGUAGU	-0.143
CAGUGCA	-0.145
AUGACAC	-0.155
CUACAGU	-0.166
AHR_ARNT_ARNT2.p2	-0.176	ARNT AHR ARNT2
UGAAAUG	-0.187
GAGAACU	-0.191
SOX5.p2	-0.207	SOX5
PAX8.p2	-0.226	PAX8
ACAUUCA	-0.227
GGAAGAC	-0.237
UUGUUCG	-0.250
MSX1,2.p2	-0.255	MSX1 MSX2
CTCF.p2	-0.296	CTCF
GUAACAG	-0.309
CCAGUGU	-0.352
PAX3,7.p2	-0.370	PAX7 PAX3
EWSR1-FLI1.p2	-0.383	FLI1 EWSR1
UUGGCAC	-0.405
PDX1.p2	-0.415	PDX1
FEV.p2	-0.442	FEV
NFKB1_REL_RELA.p2	-0.471	RELA REL NFKB1
UGUGCGU	-0.523
AGUGCAA	-0.525
CCAGCAU	-0.536
UAUUGCU	-0.542
CRX.p2	-0.566	CRX
ONECUT1,2.p2	-0.575	ONECUT2 ONECUT1
UGCAUUG	-0.587
FOX{C1,C2}.p2	-0.626	FOXC1 FOXC2
UAAGACG	-0.629
UGCAUAG	-0.639
AGCUGCC	-0.655
GGACGGA	-0.666
T.p2	-0.667	T
PATZ1.p2	-0.676	PATZ1
AGCAGCG	-0.690
TP53.p2	-0.703	TP53
TLX1..3_NFIC{dimer}.p2	-0.744	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
LHX3,4.p2	-0.755	LHX3 LHX4
MYBL2.p2	-0.762	MYBL2
HOXA9_MEIS1.p2	-0.777	MEIS1 HOXA9
GTF2A1,2.p2	-0.803	GTF2A1 GTF2A2
CDC5L.p2	-0.805	CDC5L
NKX3-1.p2	-0.811	NKX3-1
AAUCUCU	-0.818
PPARG.p2	-0.828	PPARG
ZFP161.p2	-0.850	ZFP161
HBP1_HMGB_SSRP1_UBTF.p2	-0.863	HMGB2 HMGB3 SSRP1 UBTF HBP1
GCUGGUG	-0.878
IKZF1.p2	-0.894	IKZF1
ACUGGCC	-0.902
ATF2.p2	-0.906	ATF2
GTF2I.p2	-0.913	GTF2I
UAAGACU	-0.941
ZIC1..3.p2	-0.956	ZIC1 ZIC2 ZIC3
GAUUGUC	-0.980
CGUGUCU	-0.997
AUGGCUU	-1.007
NFIX.p2	-1.010	NFIX
AIRE.p2	-1.042	AIRE
SRY.p2	-1.043	SRY
NFIL3.p2	-1.116	NFIL3
CACAGUG	-1.120
PAX6.p2	-1.123	PAX6
MZF1.p2	-1.205	MZF1
GAUCAGA	-1.225
NR4A2.p2	-1.226	NR4A2
AGCAGCA	-1.328
AR.p2	-1.341	AR
AAAGUGC	-1.344
SPZ1.p2	-1.354	SPZ1
AGCUUAU	-1.370
FOX{I1,J2}.p2	-1.412	FOXI1 FOXJ2
HMX1.p2	-1.434	HMX1
STAT1,3.p3	-1.437	STAT1 STAT3
NKX2-3_NKX2-5.p2	-1.478	NKX2-5 NKX2-3
DBP.p2	-1.510	DBP
GAGAUGA	-1.516
FOXA2.p3	-1.523	FOXA2
POU6F1.p2	-1.526	POU6F1
HMGA1,2.p2	-1.527	HMGA1 HMGA2
HLF.p2	-1.532	HLF
RORA.p2	-1.551	RORA
EOMES.p2	-1.604	EOMES
NKX2-1,4.p2	-1.614	NKX2-1 NKX2-4
DMAP1_NCOR{1,2}_SMARC.p2	-1.616	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
NR5A1,2.p2	-1.655	NR5A1 NR5A2
GAGGUAG	-1.691
AAGUGCU	-1.695
RUNX1..3.p2	-1.710	RUNX1 RUNX3 RUNX2
ZNF423.p2	-1.711	ZNF423
TBP.p2	-1.771	TBP
EBF1.p2	-1.830	EBF1
POU5F1_SOX2{dimer}.p2	-1.852	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOX{F1,F2,J1}.p2	-1.853	FOXF2 FOXJ1 FOXF1
HOX{A5,B5}.p2	-1.863	HOXB5 HOXA5
FOX{D1,D2}.p2	-1.870	FOXD2 FOXD1
NR3C1.p2	-1.873	NR3C1
ALX1.p2	-1.890	ALX1
MYFfamily.p2	-1.922	MYOD1 MYF6 MYF5 MYOG
NANOG.p2	-2.059	NANOG
GGCAGUG	-2.076
GGCUCAG	-2.084
CAGCAGG	-2.193
RXRA_VDR{dimer}.p2	-2.234	VDR	$logo of RXRA_VDR{dimer}.p2$
NANOG{mouse}.p2	-2.252	NANOG
HIC1.p2	-2.283	HIC1
MEF2{A,B,C,D}.p2	-2.300	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TAL1_TCF{3,4,12}.p2	-2.354	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
HNF1A.p2	-2.413	HNF1A
TFCP2.p2	-2.420	TFCP2
FOXP3.p2	-2.476	FOXP3
MTF1.p2	-2.498	MTF1
JUN.p2	-2.558	JUN JUND JUNB
UUUUUGC	-2.585
GLI1..3.p2	-2.596	GLI1 GLI2 GLI3
EVI1.p2	-2.627	EVI1
TCF4_dimer.p2	-2.731	TCF4
UCCCUUU	-2.852
UGUGCUU	-2.868
TBX4,5.p2	-2.901	TBX5 TBX4
ETS1,2.p2	-3.007	ETS2 ETS1
RFX1..5_RFXANK_RFXAP.p2	-3.112	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
PITX1..3.p2	-3.135	PITX2 PITX3 PITX1
KLF12.p2	-3.141	KLF12
POU1F1.p2	-3.203	POU1F1
PAX2.p2	-3.261	PAX2
LMO2.p2	-3.284	LMO2
REST.p3	-3.327	REST
EN1,2.p2	-3.607	EN1 EN2
ZEB1.p2	-3.707	ZEB1
NR1H4.p2	-3.711	NR1H4
RREB1.p2	-3.809	RREB1
SNAI1..3.p2	-3.837	SNAI2 SNAI1 SNAI3
POU5F1.p2	-3.917	POU5F1
GATA6.p2	-3.918	GATA6
CCCUGAG	-3.921
HNF4A_NR2F1,2.p2	-4.150	NR2F1 NR2F2 HNF4A
POU2F1..3.p2	-4.188	POU2F2 POU2F1 POU2F3
SMAD1..7,9.p2	-4.246	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HAND1,2.p2	-4.313	HAND1 HAND2
TGIF1.p2	-4.935	TGIF1
MYOD1.p2	-5.217	MYOD1
CUCCCAA	-6.604

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Sample name: NCI60_1_SF-539

Sorted z-values for every WM.