ISMARA results: NCI60_1

Sample name: NCI60_1_SK-MEL-2

Sorted Z-values histogram for the sample NCI60_1_SK-MEL-2

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
ELK1,4_GABP{A,B1}.p3	9.676	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
YY1.p2	5.885	YY1
ELF1,2,4.p2	5.838	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	5.654	NFYC NFYB NFYA
NRF1.p2	5.540	NRF1
EHF.p2	5.189	EHF
ZNF143.p2	5.081	ZNF143
E2F1..5.p2	4.772	E2F4 E2F5 E2F2 E2F1 E2F3
TFDP1.p2	4.747	TFDP1
KLF4.p3	4.544	KLF4
AHR_ARNT_ARNT2.p2	4.022	ARNT AHR ARNT2
HIF1A.p2	3.917	HIF1A
MYB.p2	3.894	MYB
FOXN1.p2	3.863	FOXN1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.824	ARNT MAX MYC USF1 BHLHB2 ARNT2
ATF5_CREB3.p2	2.999	ATF5 CREB3
XBP1.p3	2.895	XBP1
bHLH_family.p2	2.860	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ATF4.p2	2.559	ATF4
HOX{A4,D4}.p2	2.516	HOXA4 HOXD4
BACH2.p2	2.501	BACH2
FOXD3.p2	2.416	FOXD3
HOX{A6,A7,B6,B7}.p2	2.364	HOXB6 HOXA7 HOXB7 HOXA6
UUGGCAA	2.331
NFE2.p2	2.316	NFE2
EWSR1-FLI1.p2	2.163	FLI1 EWSR1
TP53.p2	2.062	TP53
AACACUG	2.059
GGAAUGU	1.824
ONECUT1,2.p2	1.765	ONECUT2 ONECUT1
TFEB.p2	1.601	TFEB
HMGA1,2.p2	1.553	HMGA1 HMGA2
ACAGUAU	1.508
GUAGUGU	1.500
PAX5.p2	1.486	PAX5
BPTF.p2	1.443	BPTF
GUAACAG	1.430
PBX1.p2	1.420	PBX1
NFE2L2.p2	1.378	NFE2L2
UCAAGUA	1.377
ZBTB16.p2	1.295	ZBTB16
HSF1,2.p2	1.284	HSF1 HSF2
FOXQ1.p2	1.283	FOXQ1
ESRRA.p2	1.236	ESRRA
NANOG.p2	1.199	NANOG
GUGCAAA	1.198
UCCAGUU	1.178
CCUUCAU	1.143
ACAGUAC	1.088
MAFB.p2	1.070	MAFB
SP1.p2	1.014	SP1
SOX{8,9,10}.p2	0.978	SOX9 SOX8 SOX10
AGGUAGU	0.936
NKX6-1,2.p2	0.932	NKX6-1 NKX6-2
PRDM1.p3	0.822	PRDM1
AGUGGUU	0.789
NFE2L1.p2	0.781	NFE2L1
AAGGUGC	0.750
AAGGCAC	0.744
GFI1.p2	0.707	GFI1
NR3C1.p2	0.690	NR3C1
GCAGCAU	0.647
ARID5B.p2	0.641	ARID5B
ACUGGCC	0.633
NFATC1..3.p2	0.613	NFATC3 NFATC2 NFATC1
RXRG_dimer.p3	0.607	NR1H2 RXRA PPARG PPARA RXRB RXRG
AAUACUG	0.579
GGAGUGU	0.573
IKZF1.p2	0.540	IKZF1
T.p2	0.539	T
AAUGCCC	0.498
NKX3-1.p2	0.494	NKX3-1
UUGGUCC	0.483
GZF1.p2	0.450	GZF1
PAX6.p2	0.442	PAX6
SOX2.p2	0.438	SOX2
EOMES.p2	0.436	EOMES
AACAGUC	0.409
CUACAGU	0.369
AUGGCAC	0.363
UAAGACG	0.345
IKZF2.p2	0.279	IKZF2
MSX1,2.p2	0.271	MSX1 MSX2
GGCAAGA	0.253
UGAAAUG	0.238
UCACAUU	0.234
GAUAUGU	0.207
ZNF238.p2	0.187	ZNF238
SPI1.p2	0.174	SPI1
NKX2-2,8.p2	0.166	NKX2-2 NKX2-8
EP300.p2	0.163	EP300
AAUCUCA	0.154
AACCGUU	0.133
PRRX1,2.p2	0.091	PRRX2 PRRX1
AACCUGG	0.083
STAT5{A,B}.p2	0.082	STAT5B STAT5A
RFX1..5_RFXANK_RFXAP.p2	0.081	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AUGUGCC	0.079
UGCAUUG	0.075
GAGGUAG	0.072
ACCCGUA	0.070
AAUCUCU	0.066
CCAGUGU	0.061
MYBL2.p2	0.047	MYBL2
AUGACAC	0.036
UAUUGCU	0.026
ACUGCAU	0.012
CRX.p2	-0.003	CRX
SPIB.p2	-0.026	SPIB
GUCAGUU	-0.033
ESR1.p2	-0.057	ESR1
ATF2.p2	-0.058	ATF2
NR6A1.p2	-0.088	NR6A1
UUGUUCG	-0.102
PDX1.p2	-0.104	PDX1
POU3F1..4.p2	-0.129	POU3F1 POU3F3 POU3F2 POU3F4
UGACCUA	-0.136
SOX17.p2	-0.142	SOX17
TCF4_dimer.p2	-0.146	TCF4
AUUGCAC	-0.156
CDX1,2,4.p2	-0.175	CDX1 CDX2 CDX4
CGUACCG	-0.179
GAUUGUC	-0.191
UAAUGCU	-0.207
AACGGAA	-0.213
CEBPA,B_DDIT3.p2	-0.226	DDIT3 CEBPA CEBPB
SRY.p2	-0.247	SRY
VSX1,2.p2	-0.267	VSX2 VSX1
ZNF384.p2	-0.290	ZNF384
PAX8.p2	-0.290	PAX8
UCACAGU	-0.331
UGUGCGU	-0.343
GCUACAU	-0.347
TLX2.p2	-0.347	TLX2
CTCF.p2	-0.351	CTCF
TFAP4.p2	-0.361	TFAP4
RREB1.p2	-0.388	RREB1
PAX3,7.p2	-0.399	PAX7 PAX3
ZIC1..3.p2	-0.419	ZIC1 ZIC2 ZIC3
TFAP2B.p2	-0.424	TFAP2B
AGCUUAU	-0.457
EBF1.p2	-0.474	EBF1
HES1.p2	-0.477	HES1
GCUGGUG	-0.478
GAGAACU	-0.486
GFI1B.p2	-0.503	GFI1B
CUUUGGU	-0.503
AUGGCUU	-0.517
GGAAGAC	-0.521
NR5A1,2.p2	-0.529	NR5A1 NR5A2
SOX5.p2	-0.550	SOX5
UAAGACU	-0.562
CCAGCAU	-0.568
CUX2.p2	-0.568	CUX2
TLX1..3_NFIC{dimer}.p2	-0.569	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
CREB1.p2	-0.578	CREB1
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.588	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NKX3-2.p2	-0.592	NKX3-2
PAX4.p2	-0.595	PAX4
HMX1.p2	-0.603	HMX1
PITX1..3.p2	-0.616	PITX2 PITX3 PITX1
AGUGCAA	-0.617
GGACGGA	-0.644
PAX2.p2	-0.655	PAX2
POU5F1_SOX2{dimer}.p2	-0.659	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
SPZ1.p2	-0.660	SPZ1
CGUGUCU	-0.669
GAUCAGA	-0.670
TAL1_TCF{3,4,12}.p2	-0.692	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
FOX{C1,C2}.p2	-0.732	FOXC1 FOXC2
ACAUUCA	-0.745
AGCAGCG	-0.753
HBP1_HMGB_SSRP1_UBTF.p2	-0.809	HMGB2 HMGB3 SSRP1 UBTF HBP1
FOXA2.p3	-0.813	FOXA2
NHLH1,2.p2	-0.842	NHLH1 NHLH2
CAGUGCA	-0.875
LHX3,4.p2	-0.889	LHX3 LHX4
UUGGCAC	-0.967
RBPJ.p2	-1.012	RBPJ
DMAP1_NCOR{1,2}_SMARC.p2	-1.021	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
IRF1,2,7.p3	-1.032	IRF1 IRF2 IRF7
DBP.p2	-1.048	DBP
EN1,2.p2	-1.083	EN1 EN2
FOX{F1,F2,J1}.p2	-1.100	FOXF2 FOXJ1 FOXF1
JUN.p2	-1.115	JUN JUND JUNB
AGCUGCC	-1.135
ACCCUGU	-1.138
GUAAACA	-1.146
FEV.p2	-1.165	FEV
AGCAGCA	-1.178
FOSL2.p2	-1.198	FOSL2
ATF6.p2	-1.212	ATF6
RXR{A,B,G}.p2	-1.214	RXRA RXRB RXRG
CDC5L.p2	-1.216	CDC5L
NKX2-1,4.p2	-1.226	NKX2-1 NKX2-4
MZF1.p2	-1.267	MZF1
AIRE.p2	-1.291	AIRE
POU2F1..3.p2	-1.300	POU2F2 POU2F1 POU2F3
AGCACCA	-1.332
AAGUGCU	-1.370
ADNP_IRX_SIX_ZHX.p2	-1.380	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
MEF2{A,B,C,D}.p2	-1.391	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UGCAUAG	-1.415
AAAGUGC	-1.418
CAGCAGG	-1.421
ZEB1.p2	-1.422	ZEB1
HOXA9_MEIS1.p2	-1.446	MEIS1 HOXA9
FOXO1,3,4.p2	-1.460	FOXO1 FOXO4 FOXO3
RORA.p2	-1.461	RORA
ZNF148.p2	-1.474	ZNF148
PATZ1.p2	-1.487	PATZ1
UCCCUUU	-1.517
FOXP3.p2	-1.550	FOXP3
SREBF1,2.p2	-1.553	SREBF1 SREBF2
ZBTB6.p2	-1.559	ZBTB6
NANOG{mouse}.p2	-1.605	NANOG
GGCAGUG	-1.654
NFIL3.p2	-1.663	NFIL3
MYOD1.p2	-1.669	MYOD1
TFAP2{A,C}.p2	-1.684	TFAP2C TFAP2A
ZNF423.p2	-1.695	ZNF423
FOX{D1,D2}.p2	-1.725	FOXD2 FOXD1
FOX{I1,J2}.p2	-1.747	FOXI1 FOXJ2
NFKB1_REL_RELA.p2	-1.754	RELA REL NFKB1
PPARG.p2	-1.758	PPARG
GAGAUGA	-1.773
EGR1..3.p2	-1.834	EGR3 EGR1 EGR2
UGUGCUU	-1.854
CACAGUG	-1.863
NFIX.p2	-1.869	NFIX
NR1H4.p2	-1.880	NR1H4
POU1F1.p2	-1.881	POU1F1
GATA1..3.p2	-1.982	GATA1 GATA2 GATA3
CCCUGAG	-1.982
NR4A2.p2	-1.983	NR4A2
UUUUUGC	-2.010
LMO2.p2	-2.020	LMO2
STAT1,3.p3	-2.074	STAT1 STAT3
TEAD1.p2	-2.097	TEAD1 TEAD2 TEAD3 TEAD4
FOXL1.p2	-2.105	FOXL1
HOX{A5,B5}.p2	-2.113	HOXB5 HOXA5
AR.p2	-2.141	AR
EVI1.p2	-2.143	EVI1
SRF.p3	-2.161	SRF
ALX1.p2	-2.200	ALX1
GTF2A1,2.p2	-2.247	GTF2A1 GTF2A2
GATA6.p2	-2.254	GATA6
NKX2-3_NKX2-5.p2	-2.275	NKX2-5 NKX2-3
LEF1_TCF7_TCF7L1,2.p2	-2.376	TCF7 TCF7L2 LEF1 TCF7L1
POU6F1.p2	-2.461	POU6F1
STAT2,4,6.p2	-2.466	STAT2 STAT4 STAT6
REST.p3	-2.476	REST
ZFP161.p2	-2.517	ZFP161
RXRA_VDR{dimer}.p2	-2.613	VDR	$logo of RXRA_VDR{dimer}.p2$
HNF1A.p2	-2.677	HNF1A
HAND1,2.p2	-2.692	HAND1 HAND2
RUNX1..3.p2	-2.699	RUNX1 RUNX3 RUNX2
HLF.p2	-2.769	HLF
GGCUCAG	-2.920
GLI1..3.p2	-2.962	GLI1 GLI2 GLI3
MAZ.p2	-3.049	MAZ
ETS1,2.p2	-3.104	ETS2 ETS1
MTF1.p2	-3.255	MTF1
HNF4A_NR2F1,2.p2	-3.257	NR2F1 NR2F2 HNF4A
MYFfamily.p2	-3.308	MYOD1 MYF6 MYF5 MYOG
GTF2I.p2	-3.620	GTF2I
TBP.p2	-3.642	TBP
TBX4,5.p2	-3.706	TBX5 TBX4
HIC1.p2	-4.053	HIC1
POU5F1.p2	-4.100	POU5F1
SMAD1..7,9.p2	-4.120	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
KLF12.p2	-4.343	KLF12
TGIF1.p2	-4.491	TGIF1
TFCP2.p2	-5.122	TFCP2
CUCCCAA	-5.185
SNAI1..3.p2	-5.868	SNAI2 SNAI1 SNAI3

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Sample name: NCI60_1_SK-MEL-2

Sorted z-values for every WM.