ISMARA results: NCI60_1

Sample name: NCI60_1_SK-OV-3

Sorted Z-values histogram for the sample NCI60_1_SK-OV-3

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
TFDP1.p2	8.018	TFDP1
E2F1..5.p2	6.714	E2F4 E2F5 E2F2 E2F1 E2F3
ZNF143.p2	5.327	ZNF143
YY1.p2	5.321	YY1
GGAAUGU	4.562
NRF1.p2	4.532	NRF1
MYB.p2	4.496	MYB
ELF1,2,4.p2	4.437	ELF2 ELF1 ELF4
EHF.p2	3.985	EHF
NFY{A,B,C}.p2	3.894	NFYC NFYB NFYA
PAX5.p2	3.680	PAX5
FOXD3.p2	3.668	FOXD3
KLF4.p3	3.612	KLF4
ATF4.p2	3.282	ATF4
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.200	ARNT MAX MYC USF1 BHLHB2 ARNT2
ELK1,4_GABP{A,B1}.p3	3.151	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
FOXN1.p2	3.125	FOXN1
EP300.p2	3.054	EP300
BACH2.p2	2.973	BACH2
ADNP_IRX_SIX_ZHX.p2	2.918	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ZNF148.p2	2.913	ZNF148
SOX17.p2	2.787	SOX17
NFE2L2.p2	2.640	NFE2L2
TFAP2B.p2	2.414	TFAP2B
bHLH_family.p2	2.335	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ESR1.p2	2.272	ESR1
FOS_FOS{B,L1}_JUN{B,D}.p2	2.086	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
UUGGCAA	2.003
UUUUUGC	1.944
UCAAGUA	1.896
NFE2L1.p2	1.783	NFE2L1
XBP1.p3	1.757	XBP1
ESRRA.p2	1.728	ESRRA
HIF1A.p2	1.684	HIF1A
GUGCAAA	1.552
ACAGUAU	1.478
CCUUCAU	1.422
HOX{A4,D4}.p2	1.378	HOXA4 HOXD4
ZBTB16.p2	1.329	ZBTB16
GUAACAG	1.316
CCAGUGU	1.282
GCAGCAU	1.276
UUGGUCC	1.237
BPTF.p2	1.235	BPTF
NFKB1_REL_RELA.p2	1.211	RELA REL NFKB1
CRX.p2	1.194	CRX
DMAP1_NCOR{1,2}_SMARC.p2	1.174	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
SOX2.p2	1.162	SOX2
NKX3-1.p2	1.155	NKX3-1
IKZF1.p2	1.141	IKZF1
HSF1,2.p2	1.099	HSF1 HSF2
UCCAGUU	1.092
GUAGUGU	1.057
POU3F1..4.p2	1.051	POU3F1 POU3F3 POU3F2 POU3F4
HOX{A6,A7,B6,B7}.p2	0.935	HOXB6 HOXA7 HOXB7 HOXA6
AAGGCAC	0.871
RBPJ.p2	0.837	RBPJ
SP1.p2	0.832	SP1
AACGGAA	0.812
PITX1..3.p2	0.793	PITX2 PITX3 PITX1
PRDM1.p3	0.779	PRDM1
AGUGGUU	0.775
UGAAAUG	0.757
AHR_ARNT_ARNT2.p2	0.733	ARNT AHR ARNT2
ATF5_CREB3.p2	0.731	ATF5 CREB3
CAGUGCA	0.731
CUUUGGU	0.712
SRF.p3	0.711	SRF
PBX1.p2	0.689	PBX1
TFAP2{A,C}.p2	0.682	TFAP2C TFAP2A
ZBTB6.p2	0.673	ZBTB6
HNF1A.p2	0.647	HNF1A
TEAD1.p2	0.643	TEAD1 TEAD2 TEAD3 TEAD4
LMO2.p2	0.643	LMO2
CGUACCG	0.624
AUGUGCC	0.620
EWSR1-FLI1.p2	0.598	FLI1 EWSR1
AACCUGG	0.566
ARID5B.p2	0.529	ARID5B
CREB1.p2	0.430	CREB1
NFE2.p2	0.399	NFE2
NR5A1,2.p2	0.397	NR5A1 NR5A2
HMGA1,2.p2	0.390	HMGA1 HMGA2
AUUGCAC	0.378
UCACAUU	0.371
CUACAGU	0.364
GAUAUGU	0.341
AACCGUU	0.340
AUGGCAC	0.336
AAUACUG	0.316
SOX5.p2	0.303	SOX5
GAUUGUC	0.289
T.p2	0.281	T
TLX2.p2	0.252	TLX2
AAUCUCA	0.225
POU6F1.p2	0.225	POU6F1
ATF2.p2	0.194	ATF2
ACCCUGU	0.193
GGAGUGU	0.179
AAGGUGC	0.173
HOXA9_MEIS1.p2	0.163	MEIS1 HOXA9
NKX2-2,8.p2	0.137	NKX2-2 NKX2-8
RXRG_dimer.p3	0.124	NR1H2 RXRA PPARG PPARA RXRB RXRG
SOX{8,9,10}.p2	0.122	SOX9 SOX8 SOX10
ACAGUAC	0.111
PAX3,7.p2	0.077	PAX7 PAX3
TFAP4.p2	0.077	TFAP4
FOXA2.p3	0.074	FOXA2
FOXO1,3,4.p2	0.069	FOXO1 FOXO4 FOXO3
NFATC1..3.p2	0.066	NFATC3 NFATC2 NFATC1
GFI1B.p2	0.054	GFI1B
ACCCGUA	0.053
UGCAUUG	0.051
AGGUAGU	0.040
UGACCUA	0.027
VSX1,2.p2	0.014	VSX2 VSX1
CTCF.p2	-0.019	CTCF
GFI1.p2	-0.022	GFI1
NHLH1,2.p2	-0.031	NHLH1 NHLH2
FOX{F1,F2,J1}.p2	-0.042	FOXF2 FOXJ1 FOXF1
ZNF384.p2	-0.067	ZNF384
HES1.p2	-0.067	HES1
AGCAGCG	-0.068
ACUGCAU	-0.069
AGCUUAU	-0.074
LHX3,4.p2	-0.077	LHX3 LHX4
AAUCUCU	-0.081
STAT2,4,6.p2	-0.105	STAT2 STAT4 STAT6
PAX8.p2	-0.113	PAX8
FOX{I1,J2}.p2	-0.128	FOXI1 FOXJ2
UAAUGCU	-0.130
UUGUUCG	-0.132
RXR{A,B,G}.p2	-0.187	RXRA RXRB RXRG
GAUCAGA	-0.194
GGACGGA	-0.205
IKZF2.p2	-0.205	IKZF2
PAX6.p2	-0.228	PAX6
CDC5L.p2	-0.241	CDC5L
LEF1_TCF7_TCF7L1,2.p2	-0.288	TCF7 TCF7L2 LEF1 TCF7L1
GCUGGUG	-0.312
PDX1.p2	-0.323	PDX1
ZNF238.p2	-0.335	ZNF238
PRRX1,2.p2	-0.378	PRRX2 PRRX1
STAT1,3.p3	-0.386	STAT1 STAT3
GUCAGUU	-0.398
AAUGCCC	-0.408
ACUGGCC	-0.414
HMX1.p2	-0.416	HMX1
AUGACAC	-0.433
UAAGACG	-0.435
FOXQ1.p2	-0.437	FOXQ1
UCACAGU	-0.456
GAGAUGA	-0.460
CUX2.p2	-0.462	CUX2
NKX2-3_NKX2-5.p2	-0.469	NKX2-5 NKX2-3
GCUACAU	-0.501
NKX2-1,4.p2	-0.503	NKX2-1 NKX2-4
AACACUG	-0.507
AGCUGCC	-0.521
UGUGCGU	-0.529
POU5F1_SOX2{dimer}.p2	-0.534	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CEBPA,B_DDIT3.p2	-0.541	DDIT3 CEBPA CEBPB
GGCAAGA	-0.548
UGCAUAG	-0.584
ZFP161.p2	-0.590	ZFP161
AIRE.p2	-0.591	AIRE
ZEB1.p2	-0.612	ZEB1
FOX{C1,C2}.p2	-0.618	FOXC1 FOXC2
EN1,2.p2	-0.638	EN1 EN2
DBP.p2	-0.642	DBP
AGCAGCA	-0.663
NR4A2.p2	-0.668	NR4A2
STAT5{A,B}.p2	-0.668	STAT5B STAT5A
MAZ.p2	-0.670	MAZ
GUAAACA	-0.679
GZF1.p2	-0.684	GZF1
ACAUUCA	-0.720
NKX6-1,2.p2	-0.753	NKX6-1 NKX6-2
TP53.p2	-0.755	TP53
EBF1.p2	-0.766	EBF1
MSX1,2.p2	-0.766	MSX1 MSX2
AGCACCA	-0.791
TLX1..3_NFIC{dimer}.p2	-0.791	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NFIL3.p2	-0.803	NFIL3
NFIX.p2	-0.820	NFIX
NR6A1.p2	-0.833	NR6A1
HLF.p2	-0.840	HLF
AAGUGCU	-0.866
CGUGUCU	-0.870
UUGGCAC	-0.872
RFX1..5_RFXANK_RFXAP.p2	-0.901	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CCAGCAU	-0.940
POU1F1.p2	-0.993	POU1F1
EOMES.p2	-1.028	EOMES
UAAGACU	-1.045
MYBL2.p2	-1.083	MYBL2
SREBF1,2.p2	-1.091	SREBF1 SREBF2
IRF1,2,7.p3	-1.103	IRF1 IRF2 IRF7
SRY.p2	-1.127	SRY
AACAGUC	-1.158
GAGAACU	-1.173
MAFB.p2	-1.242	MAFB
TBP.p2	-1.245	TBP
AR.p2	-1.245	AR
UCCCUUU	-1.266
AGUGCAA	-1.279
EVI1.p2	-1.283	EVI1
GLI1..3.p2	-1.292	GLI1 GLI2 GLI3
GATA6.p2	-1.368	GATA6
FOXL1.p2	-1.377	FOXL1
SPIB.p2	-1.378	SPIB
AAAGUGC	-1.414
RORA.p2	-1.427	RORA
TFCP2.p2	-1.439	TFCP2
GGAAGAC	-1.439
TFEB.p2	-1.445	TFEB
HIC1.p2	-1.490	HIC1
AUGGCUU	-1.545
RXRA_VDR{dimer}.p2	-1.554	VDR	$logo of RXRA_VDR{dimer}.p2$
ATF6.p2	-1.581	ATF6
CDX1,2,4.p2	-1.600	CDX1 CDX2 CDX4
JUN.p2	-1.635	JUN JUND JUNB
TCF4_dimer.p2	-1.639	TCF4
ALX1.p2	-1.640	ALX1
MZF1.p2	-1.666	MZF1
HOX{A5,B5}.p2	-1.674	HOXB5 HOXA5
SPI1.p2	-1.702	SPI1
FOXP3.p2	-1.812	FOXP3
CAGCAGG	-1.813
NANOG{mouse}.p2	-1.814	NANOG
PPARG.p2	-1.834	PPARG
NKX3-2.p2	-1.836	NKX3-2
NANOG.p2	-1.872	NANOG
MTF1.p2	-1.937	MTF1
GTF2A1,2.p2	-2.012	GTF2A1 GTF2A2
MYOD1.p2	-2.042	MYOD1
ETS1,2.p2	-2.055	ETS2 ETS1
HNF4A_NR2F1,2.p2	-2.058	NR2F1 NR2F2 HNF4A
ZIC1..3.p2	-2.119	ZIC1 ZIC2 ZIC3
UAUUGCU	-2.155
TAL1_TCF{3,4,12}.p2	-2.159	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CUCCCAA	-2.169
KLF12.p2	-2.179	KLF12
SNAI1..3.p2	-2.180	SNAI2 SNAI1 SNAI3
GATA1..3.p2	-2.181	GATA1 GATA2 GATA3
NR3C1.p2	-2.235	NR3C1
GAGGUAG	-2.244
REST.p3	-2.260	REST
CACAGUG	-2.308
MEF2{A,B,C,D}.p2	-2.334	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
PATZ1.p2	-2.349	PATZ1
ONECUT1,2.p2	-2.370	ONECUT2 ONECUT1
PAX4.p2	-2.394	PAX4
CCCUGAG	-2.500
EGR1..3.p2	-2.615	EGR3 EGR1 EGR2
NR1H4.p2	-2.664	NR1H4
SPZ1.p2	-2.665	SPZ1
FOSL2.p2	-2.695	FOSL2
PAX2.p2	-2.749	PAX2
SMAD1..7,9.p2	-2.770	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
UGUGCUU	-2.818
TBX4,5.p2	-2.840	TBX5 TBX4
GGCAGUG	-2.885
ZNF423.p2	-2.951	ZNF423
MYFfamily.p2	-3.049	MYOD1 MYF6 MYF5 MYOG
HAND1,2.p2	-3.060	HAND1 HAND2
RREB1.p2	-3.141	RREB1
HBP1_HMGB_SSRP1_UBTF.p2	-3.277	HMGB2 HMGB3 SSRP1 UBTF HBP1
RUNX1..3.p2	-3.396	RUNX1 RUNX3 RUNX2
POU2F1..3.p2	-3.555	POU2F2 POU2F1 POU2F3
GTF2I.p2	-3.563	GTF2I
FEV.p2	-3.613	FEV
FOX{D1,D2}.p2	-3.705	FOXD2 FOXD1
POU5F1.p2	-3.726	POU5F1
GGCUCAG	-3.922
TGIF1.p2	-4.357	TGIF1

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Sample name: NCI60_1_SK-OV-3

Sorted z-values for every WM.