ISMARA results: NCI60_1

Sample name: NCI60_1_T47D

Sorted Z-values histogram for the sample NCI60_1_T47D

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	10.154	YY1
NFY{A,B,C}.p2	8.254	NFYC NFYB NFYA
EHF.p2	8.168	EHF
ELK1,4_GABP{A,B1}.p3	7.414	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
E2F1..5.p2	6.831	E2F4 E2F5 E2F2 E2F1 E2F3
NRF1.p2	6.355	NRF1
ZNF143.p2	5.210	ZNF143
MYB.p2	4.469	MYB
XBP1.p3	3.650	XBP1
BPTF.p2	3.507	BPTF
ATF5_CREB3.p2	3.472	ATF5 CREB3
GGAAUGU	3.102
HIF1A.p2	3.025	HIF1A
SNAI1..3.p2	2.963	SNAI2 SNAI1 SNAI3
ELF1,2,4.p2	2.738	ELF2 ELF1 ELF4
SREBF1,2.p2	2.715	SREBF1 SREBF2
ZEB1.p2	2.562	ZEB1
TFAP2B.p2	2.505	TFAP2B
KLF4.p3	2.327	KLF4
BACH2.p2	2.220	BACH2
UCAAGUA	2.175
TFDP1.p2	2.083	TFDP1
PATZ1.p2	2.082	PATZ1
CREB1.p2	2.065	CREB1
bHLH_family.p2	1.889	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
RXRG_dimer.p3	1.835	NR1H2 RXRA PPARG PPARA RXRB RXRG
UAAUGCU	1.809
NFE2L1.p2	1.755	NFE2L1
CTCF.p2	1.719	CTCF
UUGGCAA	1.706
ATF4.p2	1.703	ATF4
AGUGGUU	1.529
ESR1.p2	1.502	ESR1
ZBTB16.p2	1.480	ZBTB16
FOS_FOS{B,L1}_JUN{B,D}.p2	1.456	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
IKZF1.p2	1.417	IKZF1
UCACAGU	1.371
HOX{A4,D4}.p2	1.279	HOXA4 HOXD4
GUAACAG	1.251
TP53.p2	1.234	TP53
ESRRA.p2	1.212	ESRRA
PAX2.p2	1.207	PAX2
LEF1_TCF7_TCF7L1,2.p2	1.202	TCF7 TCF7L2 LEF1 TCF7L1
NKX2-2,8.p2	1.174	NKX2-2 NKX2-8
FOXD3.p2	1.111	FOXD3
SPZ1.p2	1.109	SPZ1
SOX{8,9,10}.p2	1.027	SOX9 SOX8 SOX10
PBX1.p2	1.011	PBX1
GUGCAAA	0.996
UCACAUU	0.996
PRRX1,2.p2	0.965	PRRX2 PRRX1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	0.963	ARNT MAX MYC USF1 BHLHB2 ARNT2
CDX1,2,4.p2	0.948	CDX1 CDX2 CDX4
SOX5.p2	0.927	SOX5
NFE2L2.p2	0.870	NFE2L2
ONECUT1,2.p2	0.846	ONECUT2 ONECUT1
AGCAGCA	0.815
GUAGUGU	0.813
GGAGUGU	0.795
GUCAGUU	0.794
GCUACAU	0.744
FOXN1.p2	0.720	FOXN1
FOXA2.p3	0.718	FOXA2
TEAD1.p2	0.717	TEAD1 TEAD2 TEAD3 TEAD4
PPARG.p2	0.712	PPARG
GFI1.p2	0.699	GFI1
CCUUCAU	0.677
AUGGCUU	0.668
UCCAGUU	0.646
SOX2.p2	0.624	SOX2
STAT5{A,B}.p2	0.590	STAT5B STAT5A
CUUUGGU	0.540
FOXQ1.p2	0.523	FOXQ1
HLF.p2	0.511	HLF
SP1.p2	0.509	SP1
AAGGCAC	0.472
EWSR1-FLI1.p2	0.467	FLI1 EWSR1
UGCAUAG	0.436
NKX3-1.p2	0.425	NKX3-1
PAX4.p2	0.419	PAX4
MAFB.p2	0.412	MAFB
AACCUGG	0.378
PRDM1.p3	0.359	PRDM1
GGACGGA	0.358
ACUGGCC	0.323
VSX1,2.p2	0.317	VSX2 VSX1
HMGA1,2.p2	0.282	HMGA1 HMGA2
UGAAAUG	0.275
GAUAUGU	0.269
AGCUUAU	0.238
AAUCUCU	0.229
CCAGUGU	0.210
UAAGACG	0.207
CEBPA,B_DDIT3.p2	0.201	DDIT3 CEBPA CEBPB
GGCAAGA	0.185
POU6F1.p2	0.182	POU6F1
ARID5B.p2	0.155	ARID5B
NFIX.p2	0.147	NFIX
HMX1.p2	0.116	HMX1
AUGACAC	0.097
AACACUG	0.096
UAAGACU	0.092
ACUGCAU	0.070
ACCCGUA	0.065
AACCGUU	0.044
GZF1.p2	0.043	GZF1
UUGUUCG	0.040
ADNP_IRX_SIX_ZHX.p2	0.039	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CAGUGCA	0.037
PAX8.p2	0.037	PAX8
AUGGCAC	0.035
AAUCUCA	0.020
ATF2.p2	-0.004	ATF2
UGUGCGU	-0.010
GAGGUAG	-0.016
ACAGUAC	-0.027
PAX5.p2	-0.030	PAX5
ZBTB6.p2	-0.031	ZBTB6
CGUACCG	-0.031
NR6A1.p2	-0.055	NR6A1
ZNF384.p2	-0.061	ZNF384
GAUUGUC	-0.067
AGGUAGU	-0.084
GAGAACU	-0.096
CRX.p2	-0.119	CRX
UGACCUA	-0.154
SPI1.p2	-0.164	SPI1
UUGGCAC	-0.170
PAX3,7.p2	-0.231	PAX7 PAX3
GCUGGUG	-0.258
FOXL1.p2	-0.260	FOXL1
AAGGUGC	-0.288
NKX2-1,4.p2	-0.290	NKX2-1 NKX2-4
AGCAGCG	-0.306
EP300.p2	-0.323	EP300
CUACAGU	-0.342
AAUGCCC	-0.375
RBPJ.p2	-0.387	RBPJ
AAGUGCU	-0.392
HES1.p2	-0.392	HES1
UGCAUUG	-0.410
UUGGUCC	-0.419
ACAUUCA	-0.475
EOMES.p2	-0.493	EOMES
AACGGAA	-0.499
PITX1..3.p2	-0.544	PITX2 PITX3 PITX1
ZNF148.p2	-0.572	ZNF148
HOXA9_MEIS1.p2	-0.585	MEIS1 HOXA9
UAUUGCU	-0.589
GAUCAGA	-0.600
GFI1B.p2	-0.610	GFI1B
AUGUGCC	-0.634
RORA.p2	-0.646	RORA
ACCCUGU	-0.647
NKX2-3_NKX2-5.p2	-0.679	NKX2-5 NKX2-3
AGCUGCC	-0.688
T.p2	-0.689	T
GLI1..3.p2	-0.705	GLI1 GLI2 GLI3
CCCUGAG	-0.708
SRY.p2	-0.741	SRY
SOX17.p2	-0.741	SOX17
AAUACUG	-0.752
TBX4,5.p2	-0.761	TBX5 TBX4
AACAGUC	-0.768
NKX6-1,2.p2	-0.773	NKX6-1 NKX6-2
CACAGUG	-0.793
CDC5L.p2	-0.798	CDC5L
HOX{A6,A7,B6,B7}.p2	-0.799	HOXB6 HOXA7 HOXB7 HOXA6
AAAGUGC	-0.842
LMO2.p2	-0.851	LMO2
GAGAUGA	-0.855
IKZF2.p2	-0.857	IKZF2
MAZ.p2	-0.858	MAZ
FOX{F1,F2,J1}.p2	-0.869	FOXF2 FOXJ1 FOXF1
NR5A1,2.p2	-0.879	NR5A1 NR5A2
ALX1.p2	-0.880	ALX1
ACAGUAU	-0.919
LHX3,4.p2	-0.966	LHX3 LHX4
EGR1..3.p2	-0.971	EGR3 EGR1 EGR2
CGUGUCU	-1.001
TFAP2{A,C}.p2	-1.017	TFAP2C TFAP2A
AUUGCAC	-1.031
UCCCUUU	-1.067
PDX1.p2	-1.071	PDX1
GGAAGAC	-1.077
PAX6.p2	-1.106	PAX6
DBP.p2	-1.135	DBP
TFEB.p2	-1.177	TFEB
POU3F1..4.p2	-1.193	POU3F1 POU3F3 POU3F2 POU3F4
FOXO1,3,4.p2	-1.221	FOXO1 FOXO4 FOXO3
TAL1_TCF{3,4,12}.p2	-1.232	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AIRE.p2	-1.232	AIRE
RXRA_VDR{dimer}.p2	-1.257	VDR	$logo of RXRA_VDR{dimer}.p2$
EN1,2.p2	-1.262	EN1 EN2
FOX{C1,C2}.p2	-1.305	FOXC1 FOXC2
SPIB.p2	-1.321	SPIB
NFIL3.p2	-1.341	NFIL3
AGCACCA	-1.345
ATF6.p2	-1.351	ATF6
HOX{A5,B5}.p2	-1.351	HOXB5 HOXA5
MSX1,2.p2	-1.375	MSX1 MSX2
NR4A2.p2	-1.405	NR4A2
HSF1,2.p2	-1.465	HSF1 HSF2
CUX2.p2	-1.502	CUX2
NKX3-2.p2	-1.567	NKX3-2
FOX{D1,D2}.p2	-1.571	FOXD2 FOXD1
TFAP4.p2	-1.603	TFAP4
CCAGCAU	-1.620
DMAP1_NCOR{1,2}_SMARC.p2	-1.630	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
MEF2{A,B,C,D}.p2	-1.641	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NFATC1..3.p2	-1.649	NFATC3 NFATC2 NFATC1
CAGCAGG	-1.651
FOX{I1,J2}.p2	-1.678	FOXI1 FOXJ2
RXR{A,B,G}.p2	-1.690	RXRA RXRB RXRG
FOXP3.p2	-1.701	FOXP3
AR.p2	-1.713	AR
NANOG{mouse}.p2	-1.725	NANOG
EBF1.p2	-1.729	EBF1
RFX1..5_RFXANK_RFXAP.p2	-1.737	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
STAT2,4,6.p2	-1.755	STAT2 STAT4 STAT6
UGUGCUU	-1.767
NR1H4.p2	-1.793	NR1H4
GCAGCAU	-1.810
ETS1,2.p2	-1.813	ETS2 ETS1
EVI1.p2	-1.816	EVI1
MZF1.p2	-1.834	MZF1
GGCAGUG	-1.850
GUAAACA	-1.892
TCF4_dimer.p2	-1.919	TCF4
UUUUUGC	-1.926
ZNF423.p2	-1.931	ZNF423
NANOG.p2	-1.966	NANOG
STAT1,3.p3	-1.970	STAT1 STAT3
AGUGCAA	-1.981
NR3C1.p2	-2.060	NR3C1
ZNF238.p2	-2.098	ZNF238
MYBL2.p2	-2.103	MYBL2
AHR_ARNT_ARNT2.p2	-2.105	ARNT AHR ARNT2
ZFP161.p2	-2.127	ZFP161
ZIC1..3.p2	-2.172	ZIC1 ZIC2 ZIC3
GGCUCAG	-2.244
POU5F1_SOX2{dimer}.p2	-2.252	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
HNF1A.p2	-2.255	HNF1A
SRF.p3	-2.267	SRF
MYFfamily.p2	-2.279	MYOD1 MYF6 MYF5 MYOG
SMAD1..7,9.p2	-2.288	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TFCP2.p2	-2.355	TFCP2
HBP1_HMGB_SSRP1_UBTF.p2	-2.480	HMGB2 HMGB3 SSRP1 UBTF HBP1
GATA6.p2	-2.574	GATA6
GTF2I.p2	-2.589	GTF2I
FEV.p2	-2.607	FEV
NHLH1,2.p2	-2.612	NHLH1 NHLH2
REST.p3	-2.616	REST
NFE2.p2	-2.652	NFE2
HNF4A_NR2F1,2.p2	-2.711	NR2F1 NR2F2 HNF4A
IRF1,2,7.p3	-2.777	IRF1 IRF2 IRF7
GATA1..3.p2	-2.825	GATA1 GATA2 GATA3
POU2F1..3.p2	-2.847	POU2F2 POU2F1 POU2F3
KLF12.p2	-2.873	KLF12
FOSL2.p2	-3.017	FOSL2
TLX2.p2	-3.024	TLX2
POU5F1.p2	-3.038	POU5F1
GTF2A1,2.p2	-3.046	GTF2A1 GTF2A2
MTF1.p2	-3.202	MTF1
POU1F1.p2	-3.318	POU1F1
HAND1,2.p2	-3.692	HAND1 HAND2
TBP.p2	-3.695	TBP
TGIF1.p2	-3.731	TGIF1
NFKB1_REL_RELA.p2	-3.821	RELA REL NFKB1
JUN.p2	-3.971	JUN JUND JUNB
MYOD1.p2	-4.286	MYOD1
HIC1.p2	-4.392	HIC1
RREB1.p2	-4.536	RREB1
CUCCCAA	-4.570
RUNX1..3.p2	-5.192	RUNX1 RUNX3 RUNX2
TLX1..3_NFIC{dimer}.p2	-5.732	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$

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Sample name: NCI60_1_T47D

Sorted z-values for every WM.