ISMARA results: NCI60_1

Sample name: NCI60_1_TK-10

Sorted Z-values histogram for the sample NCI60_1_TK-10

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
E2F1..5.p2	6.980	E2F4 E2F5 E2F2 E2F1 E2F3
YY1.p2	6.978	YY1
bHLH_family.p2	6.567	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
TFDP1.p2	5.779	TFDP1
ELF1,2,4.p2	4.777	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	4.719	NFYC NFYB NFYA
ELK1,4_GABP{A,B1}.p3	4.125	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	3.647	MYB
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.645	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZNF143.p2	3.625	ZNF143
NFKB1_REL_RELA.p2	3.378	RELA REL NFKB1
ZNF148.p2	3.230	ZNF148
HIF1A.p2	3.138	HIF1A
EHF.p2	3.086	EHF
TP53.p2	2.953	TP53
EP300.p2	2.906	EP300
FOXN1.p2	2.867	FOXN1
GGAAUGU	2.849
NRF1.p2	2.820	NRF1
BACH2.p2	2.808	BACH2
UCCAGUU	2.808
KLF4.p3	2.720	KLF4
TFAP2B.p2	2.686	TFAP2B
ATF5_CREB3.p2	2.539	ATF5 CREB3
AAGGCAC	2.495
XBP1.p3	2.482	XBP1
UCACAUU	2.463
ESRRA.p2	2.346	ESRRA
PAX5.p2	2.105	PAX5
BPTF.p2	2.028	BPTF
FOXD3.p2	1.961	FOXD3
HOX{A6,A7,B6,B7}.p2	1.924	HOXB6 HOXA7 HOXB7 HOXA6
PRDM1.p3	1.912	PRDM1
AHR_ARNT_ARNT2.p2	1.899	ARNT AHR ARNT2
AGUGGUU	1.806
FOS_FOS{B,L1}_JUN{B,D}.p2	1.740	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
SP1.p2	1.722	SP1
CCUUCAU	1.717
NKX2-2,8.p2	1.550	NKX2-2 NKX2-8
ZEB1.p2	1.537	ZEB1
CREB1.p2	1.531	CREB1
GUAGUGU	1.530
NKX3-1.p2	1.503	NKX3-1
UCAAGUA	1.475
ACAGUAU	1.470
UUGGCAA	1.380
NFATC1..3.p2	1.357	NFATC3 NFATC2 NFATC1
SOX17.p2	1.261	SOX17
HMX1.p2	1.238	HMX1
UGCAUUG	1.216
GUCAGUU	1.176
GUAACAG	1.171
SRF.p3	1.167	SRF
ESR1.p2	1.148	ESR1
GCAGCAU	1.136
ADNP_IRX_SIX_ZHX.p2	1.135	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
AAUGCCC	1.129
SOX2.p2	0.986	SOX2
CRX.p2	0.950	CRX
ARID5B.p2	0.875	ARID5B
HSF1,2.p2	0.812	HSF1 HSF2
PBX1.p2	0.770	PBX1
GAUAUGU	0.764
MSX1,2.p2	0.757	MSX1 MSX2
IKZF1.p2	0.749	IKZF1
GUGCAAA	0.717
CTCF.p2	0.695	CTCF
CUACAGU	0.683
NFE2.p2	0.674	NFE2
NKX3-2.p2	0.670	NKX3-2
NFE2L2.p2	0.655	NFE2L2
TBP.p2	0.642	TBP
CEBPA,B_DDIT3.p2	0.599	DDIT3 CEBPA CEBPB
MYBL2.p2	0.598	MYBL2
AUUGCAC	0.574
SPI1.p2	0.558	SPI1
UCACAGU	0.522
AUGGCAC	0.516
HES1.p2	0.512	HES1
GGAGUGU	0.434
SOX{8,9,10}.p2	0.431	SOX9 SOX8 SOX10
HLF.p2	0.403	HLF
AGCAGCG	0.386
UUGGUCC	0.346
AACCUGG	0.322
AACCGUU	0.306
RBPJ.p2	0.303	RBPJ
LEF1_TCF7_TCF7L1,2.p2	0.283	TCF7 TCF7L2 LEF1 TCF7L1
NKX6-1,2.p2	0.276	NKX6-1 NKX6-2
PITX1..3.p2	0.276	PITX2 PITX3 PITX1
NFE2L1.p2	0.251	NFE2L1
RXRG_dimer.p3	0.166	NR1H2 RXRA PPARG PPARA RXRB RXRG
UGACCUA	0.164
ZBTB16.p2	0.142	ZBTB16
AUGUGCC	0.140
ACUGGCC	0.124
CCAGUGU	0.116
UGAAAUG	0.100
GZF1.p2	0.086	GZF1
LHX3,4.p2	0.082	LHX3 LHX4
ZBTB6.p2	0.079	ZBTB6
ACUGCAU	0.066
PAX6.p2	0.035	PAX6
AACACUG	0.019
ACCCGUA	0.009
AGGUAGU	0.004
HOX{A4,D4}.p2	-0.005	HOXA4 HOXD4
TFAP4.p2	-0.006	TFAP4
NFIX.p2	-0.008	NFIX
CUX2.p2	-0.011	CUX2
DMAP1_NCOR{1,2}_SMARC.p2	-0.020	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ATF4.p2	-0.040	ATF4
GCUACAU	-0.042
ONECUT1,2.p2	-0.048	ONECUT2 ONECUT1
SRY.p2	-0.055	SRY
FOXQ1.p2	-0.057	FOXQ1
PAX3,7.p2	-0.101	PAX7 PAX3
NR4A2.p2	-0.121	NR4A2
IRF1,2,7.p3	-0.128	IRF1 IRF2 IRF7
AUGACAC	-0.137
AAUACUG	-0.168
PAX8.p2	-0.181	PAX8
AACGGAA	-0.220
VSX1,2.p2	-0.227	VSX2 VSX1
UUGUUCG	-0.244
GCUGGUG	-0.245
ATF2.p2	-0.254	ATF2
FOX{F1,F2,J1}.p2	-0.256	FOXF2 FOXJ1 FOXF1
ZIC1..3.p2	-0.263	ZIC1 ZIC2 ZIC3
ACAGUAC	-0.273
AAUCUCA	-0.279
POU3F1..4.p2	-0.293	POU3F1 POU3F3 POU3F2 POU3F4
CGUACCG	-0.295
CUUUGGU	-0.296
UAAGACG	-0.297
AGUGCAA	-0.315
STAT2,4,6.p2	-0.332	STAT2 STAT4 STAT6
T.p2	-0.346	T
TLX1..3_NFIC{dimer}.p2	-0.403	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HOXA9_MEIS1.p2	-0.404	MEIS1 HOXA9
NR6A1.p2	-0.411	NR6A1
GGACGGA	-0.417
EWSR1-FLI1.p2	-0.428	FLI1 EWSR1
PATZ1.p2	-0.433	PATZ1
UAAGACU	-0.433
PDX1.p2	-0.442	PDX1
FOXA2.p3	-0.459	FOXA2
GFI1B.p2	-0.487	GFI1B
UGUGCGU	-0.506
AAUCUCU	-0.515
UAAUGCU	-0.534
ACCCUGU	-0.546
NKX2-3_NKX2-5.p2	-0.566	NKX2-5 NKX2-3
CDC5L.p2	-0.606	CDC5L
GGCAAGA	-0.609
UGCAUAG	-0.617
UUGGCAC	-0.664
UUUUUGC	-0.671
CCAGCAU	-0.674
CGUGUCU	-0.690
LMO2.p2	-0.713	LMO2
GAGAACU	-0.714
ZNF238.p2	-0.725	ZNF238
AACAGUC	-0.732
FOSL2.p2	-0.740	FOSL2
POU5F1_SOX2{dimer}.p2	-0.742	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GAUCAGA	-0.743
RORA.p2	-0.743	RORA
FOX{I1,J2}.p2	-0.750	FOXI1 FOXJ2
FOX{C1,C2}.p2	-0.756	FOXC1 FOXC2
DBP.p2	-0.761	DBP
GAUUGUC	-0.770
AIRE.p2	-0.773	AIRE
NKX2-1,4.p2	-0.776	NKX2-1 NKX2-4
CDX1,2,4.p2	-0.835	CDX1 CDX2 CDX4
ZNF384.p2	-0.850	ZNF384
AGCUUAU	-0.901
HNF1A.p2	-0.916	HNF1A
AAGGUGC	-0.943
CACAGUG	-0.952
NANOG.p2	-0.978	NANOG
PRRX1,2.p2	-1.005	PRRX2 PRRX1
POU6F1.p2	-1.022	POU6F1
SOX5.p2	-1.036	SOX5
SPZ1.p2	-1.048	SPZ1
AR.p2	-1.061	AR
SREBF1,2.p2	-1.076	SREBF1 SREBF2
NR3C1.p2	-1.078	NR3C1
ACAUUCA	-1.104
MAFB.p2	-1.116	MAFB
GFI1.p2	-1.118	GFI1
MTF1.p2	-1.161	MTF1
HMGA1,2.p2	-1.174	HMGA1 HMGA2
AAAGUGC	-1.195
TAL1_TCF{3,4,12}.p2	-1.198	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
MYOD1.p2	-1.210	MYOD1
AGCUGCC	-1.224
AGCACCA	-1.234
PPARG.p2	-1.259	PPARG
IKZF2.p2	-1.328	IKZF2
NFIL3.p2	-1.338	NFIL3
TEAD1.p2	-1.341	TEAD1 TEAD2 TEAD3 TEAD4
CAGUGCA	-1.351
TFAP2{A,C}.p2	-1.351	TFAP2C TFAP2A
MZF1.p2	-1.382	MZF1
AAGUGCU	-1.385
TFEB.p2	-1.391	TFEB
UAUUGCU	-1.392
STAT1,3.p3	-1.404	STAT1 STAT3
EBF1.p2	-1.410	EBF1
GLI1..3.p2	-1.438	GLI1 GLI2 GLI3
FEV.p2	-1.471	FEV
TLX2.p2	-1.499	TLX2
GGAAGAC	-1.567
FOXL1.p2	-1.568	FOXL1
AGCAGCA	-1.595
STAT5{A,B}.p2	-1.669	STAT5B STAT5A
CCCUGAG	-1.681
NR5A1,2.p2	-1.723	NR5A1 NR5A2
GAGAUGA	-1.726
RXR{A,B,G}.p2	-1.757	RXRA RXRB RXRG
GUAAACA	-1.780
RXRA_VDR{dimer}.p2	-1.780	VDR	$logo of RXRA_VDR{dimer}.p2$
SPIB.p2	-1.780	SPIB
PAX4.p2	-1.782	PAX4
ALX1.p2	-1.798	ALX1
HNF4A_NR2F1,2.p2	-1.817	NR2F1 NR2F2 HNF4A
JUN.p2	-1.817	JUN JUND JUNB
CAGCAGG	-1.819
ZNF423.p2	-1.830	ZNF423
GGCAGUG	-1.868
NR1H4.p2	-1.874	NR1H4
GAGGUAG	-1.876
FOXO1,3,4.p2	-1.891	FOXO1 FOXO4 FOXO3
ZFP161.p2	-1.896	ZFP161
MAZ.p2	-1.930	MAZ
GATA6.p2	-1.944	GATA6
GATA1..3.p2	-2.001	GATA1 GATA2 GATA3
EOMES.p2	-2.026	EOMES
FOXP3.p2	-2.037	FOXP3
NANOG{mouse}.p2	-2.084	NANOG
EN1,2.p2	-2.170	EN1 EN2
REST.p3	-2.176	REST
HOX{A5,B5}.p2	-2.235	HOXB5 HOXA5
AUGGCUU	-2.266
GTF2A1,2.p2	-2.296	GTF2A1 GTF2A2
NHLH1,2.p2	-2.348	NHLH1 NHLH2
SNAI1..3.p2	-2.422	SNAI2 SNAI1 SNAI3
HAND1,2.p2	-2.456	HAND1 HAND2
POU1F1.p2	-2.469	POU1F1
GTF2I.p2	-2.513	GTF2I
PAX2.p2	-2.548	PAX2
UCCCUUU	-2.574
EVI1.p2	-2.585	EVI1
RUNX1..3.p2	-2.586	RUNX1 RUNX3 RUNX2
HBP1_HMGB_SSRP1_UBTF.p2	-2.614	HMGB2 HMGB3 SSRP1 UBTF HBP1
MEF2{A,B,C,D}.p2	-3.070	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TCF4_dimer.p2	-3.099	TCF4
UGUGCUU	-3.172
HIC1.p2	-3.172	HIC1
POU5F1.p2	-3.257	POU5F1
ETS1,2.p2	-3.267	ETS2 ETS1
RFX1..5_RFXANK_RFXAP.p2	-3.273	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MYFfamily.p2	-3.287	MYOD1 MYF6 MYF5 MYOG
FOX{D1,D2}.p2	-3.439	FOXD2 FOXD1
TFCP2.p2	-3.491	TFCP2
RREB1.p2	-3.509	RREB1
EGR1..3.p2	-3.549	EGR3 EGR1 EGR2
CUCCCAA	-3.600
TBX4,5.p2	-3.664	TBX5 TBX4
GGCUCAG	-3.797
TGIF1.p2	-4.060	TGIF1
POU2F1..3.p2	-4.462	POU2F2 POU2F1 POU2F3
SMAD1..7,9.p2	-4.660	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ATF6.p2	-4.762	ATF6
KLF12.p2	-6.908	KLF12

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Sample name: NCI60_1_TK-10

Sorted z-values for every WM.