ISMARA results: NCI60_1

Sample name: NCI60_1_UACC-62

Sorted Z-values histogram for the sample NCI60_1_UACC-62

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
ELK1,4_GABP{A,B1}.p3	7.240	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
YY1.p2	7.214	YY1
NRF1.p2	7.017	NRF1
ELF1,2,4.p2	5.195	ELF2 ELF1 ELF4
ZNF143.p2	4.902	ZNF143
XBP1.p3	4.589	XBP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	4.257	ARNT MAX MYC USF1 BHLHB2 ARNT2
bHLH_family.p2	4.245	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
EHF.p2	4.202	EHF
MYB.p2	4.036	MYB
E2F1..5.p2	3.937	E2F4 E2F5 E2F2 E2F1 E2F3
HIF1A.p2	3.541	HIF1A
ATF4.p2	3.418	ATF4
NFY{A,B,C}.p2	3.226	NFYC NFYB NFYA
AAGGCAC	3.071
KLF4.p3	3.058	KLF4
GUAGUGU	2.909
AHR_ARNT_ARNT2.p2	2.887	ARNT AHR ARNT2
FOXD3.p2	2.560	FOXD3
SOX17.p2	2.409	SOX17
HES1.p2	2.361	HES1
ATF5_CREB3.p2	2.176	ATF5 CREB3
GUGCAAA	2.003
TFDP1.p2	2.003	TFDP1
HOX{A6,A7,B6,B7}.p2	1.981	HOXB6 HOXA7 HOXB7 HOXA6
ESRRA.p2	1.971	ESRRA
HMGA1,2.p2	1.968	HMGA1 HMGA2
FOXN1.p2	1.948	FOXN1
MAFB.p2	1.920	MAFB
GUAACAG	1.782
TP53.p2	1.666	TP53
AGCACCA	1.573
NR5A1,2.p2	1.513	NR5A1 NR5A2
UUGGCAA	1.502
GFI1.p2	1.454	GFI1
NKX6-1,2.p2	1.423	NKX6-1 NKX6-2
NANOG.p2	1.409	NANOG
HOX{A4,D4}.p2	1.340	HOXA4 HOXD4
NFE2L2.p2	1.288	NFE2L2
AACACUG	1.284
SOX{8,9,10}.p2	1.277	SOX9 SOX8 SOX10
RXRG_dimer.p3	1.268	NR1H2 RXRA PPARG PPARA RXRB RXRG
ACAGUAU	1.255
ACAGUAC	1.246
PRDM1.p3	1.234	PRDM1
ZNF238.p2	1.134	ZNF238
BPTF.p2	1.108	BPTF
BACH2.p2	1.106	BACH2
EWSR1-FLI1.p2	1.027	FLI1 EWSR1
GGAGUGU	1.003
CTCF.p2	0.993	CTCF
LHX3,4.p2	0.984	LHX3 LHX4
NFE2L1.p2	0.968	NFE2L1
GAGGUAG	0.930
UUGGUCC	0.908
AUGGCUU	0.878
AACCUGG	0.846
AGCAGCA	0.840
EP300.p2	0.828	EP300
UCAAGUA	0.809
NFATC1..3.p2	0.792	NFATC3 NFATC2 NFATC1
T.p2	0.788	T
RXR{A,B,G}.p2	0.787	RXRA RXRB RXRG
CCUUCAU	0.695
PBX1.p2	0.687	PBX1
SOX2.p2	0.669	SOX2
TFAP4.p2	0.658	TFAP4
AUGGCAC	0.657
CUACAGU	0.636
CCAGUGU	0.609
TFEB.p2	0.597	TFEB
FOS_FOS{B,L1}_JUN{B,D}.p2	0.560	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AAUGCCC	0.547
AGCAGCG	0.531
TFAP2{A,C}.p2	0.516	TFAP2C TFAP2A
ARID5B.p2	0.511	ARID5B
SPI1.p2	0.466	SPI1
TFAP2B.p2	0.449	TFAP2B
MYBL2.p2	0.444	MYBL2
NFE2.p2	0.443	NFE2
ZIC1..3.p2	0.442	ZIC1 ZIC2 ZIC3
ACUGCAU	0.439
AGUGGUU	0.414
PITX1..3.p2	0.414	PITX2 PITX3 PITX1
ACUGGCC	0.407
CGUACCG	0.404
DBP.p2	0.395	DBP
PRRX1,2.p2	0.379	PRRX2 PRRX1
NKX2-2,8.p2	0.379	NKX2-2 NKX2-8
PATZ1.p2	0.371	PATZ1
FOXQ1.p2	0.369	FOXQ1
CEBPA,B_DDIT3.p2	0.368	DDIT3 CEBPA CEBPB
NHLH1,2.p2	0.351	NHLH1 NHLH2
MSX1,2.p2	0.350	MSX1 MSX2
ONECUT1,2.p2	0.330	ONECUT2 ONECUT1
IKZF1.p2	0.328	IKZF1
AAGGUGC	0.327
PAX6.p2	0.319	PAX6
AACAGUC	0.301
PAX5.p2	0.299	PAX5
GAUAUGU	0.271
ZBTB16.p2	0.259	ZBTB16
AACCGUU	0.231
AAUCUCA	0.222
GZF1.p2	0.221	GZF1
UAAGACG	0.212
AGGUAGU	0.205
AGCUUAU	0.196
PDX1.p2	0.186	PDX1
TLX2.p2	0.184	TLX2
IKZF2.p2	0.180	IKZF2
GGAAUGU	0.179
SRY.p2	0.153	SRY
UCACAGU	0.146
GCAGCAU	0.124
AUGACAC	0.124
AAUACUG	0.115
ACCCGUA	0.094
ATF6.p2	0.089	ATF6
UGACCUA	0.089
UCACAUU	0.080
GFI1B.p2	0.071	GFI1B
GCUACAU	-0.003
NR1H4.p2	-0.047	NR1H4
EOMES.p2	-0.063	EOMES
GGCAAGA	-0.063
UGAAAUG	-0.070
AUGUGCC	-0.075
AUUGCAC	-0.078
RREB1.p2	-0.098	RREB1
CUUUGGU	-0.107
GGACGGA	-0.116
SPZ1.p2	-0.155	SPZ1
NR6A1.p2	-0.197	NR6A1
HMX1.p2	-0.200	HMX1
HSF1,2.p2	-0.210	HSF1 HSF2
AAUCUCU	-0.228
PAX3,7.p2	-0.233	PAX7 PAX3
NR3C1.p2	-0.270	NR3C1
AACGGAA	-0.271
UGCAUAG	-0.280
FOXA2.p3	-0.291	FOXA2
STAT5{A,B}.p2	-0.301	STAT5B STAT5A
UUGUUCG	-0.309
PAX8.p2	-0.337	PAX8
SRF.p3	-0.347	SRF
RFX1..5_RFXANK_RFXAP.p2	-0.351	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CGUGUCU	-0.373
FOSL2.p2	-0.374	FOSL2
UGCAUUG	-0.375
UGUGCGU	-0.384
FOXO1,3,4.p2	-0.432	FOXO1 FOXO4 FOXO3
CCAGCAU	-0.455
CRX.p2	-0.492	CRX
POU3F1..4.p2	-0.496	POU3F1 POU3F3 POU3F2 POU3F4
UAAUGCU	-0.498
ATF2.p2	-0.504	ATF2
VSX1,2.p2	-0.516	VSX2 VSX1
UAAGACU	-0.521
GAUUGUC	-0.530
CREB1.p2	-0.560	CREB1
ESR1.p2	-0.592	ESR1
CDX1,2,4.p2	-0.629	CDX1 CDX2 CDX4
SPIB.p2	-0.644	SPIB
GCUGGUG	-0.653
GAUCAGA	-0.677
TAL1_TCF{3,4,12}.p2	-0.701	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NKX3-1.p2	-0.708	NKX3-1
ZNF148.p2	-0.737	ZNF148
STAT2,4,6.p2	-0.742	STAT2 STAT4 STAT6
ACCCUGU	-0.746
POU5F1_SOX2{dimer}.p2	-0.761	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOX{I1,J2}.p2	-0.769	FOXI1 FOXJ2
LEF1_TCF7_TCF7L1,2.p2	-0.773	TCF7 TCF7L2 LEF1 TCF7L1
JUN.p2	-0.777	JUN JUND JUNB
HOX{A5,B5}.p2	-0.777	HOXB5 HOXA5
EN1,2.p2	-0.783	EN1 EN2
SP1.p2	-0.783	SP1
TLX1..3_NFIC{dimer}.p2	-0.818	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HOXA9_MEIS1.p2	-0.832	MEIS1 HOXA9
ADNP_IRX_SIX_ZHX.p2	-0.841	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GUAAACA	-0.843
PPARG.p2	-0.849	PPARG
ZNF384.p2	-0.981	ZNF384
FOXL1.p2	-1.031	FOXL1
UAUUGCU	-1.040
FOX{C1,C2}.p2	-1.052	FOXC1 FOXC2
CAGUGCA	-1.074
STAT1,3.p3	-1.114	STAT1 STAT3
UUUUUGC	-1.137
GAGAACU	-1.153
ACAUUCA	-1.163
CUX2.p2	-1.165	CUX2
RBPJ.p2	-1.165	RBPJ
UCCAGUU	-1.167
FOX{F1,F2,J1}.p2	-1.199	FOXF2 FOXJ1 FOXF1
NKX2-1,4.p2	-1.227	NKX2-1 NKX2-4
GUCAGUU	-1.236
UUGGCAC	-1.248
POU6F1.p2	-1.276	POU6F1
CCCUGAG	-1.281
TCF4_dimer.p2	-1.297	TCF4
MZF1.p2	-1.307	MZF1
GTF2A1,2.p2	-1.366	GTF2A1 GTF2A2
GGAAGAC	-1.372
ZFP161.p2	-1.383	ZFP161
EGR1..3.p2	-1.413	EGR3 EGR1 EGR2
ZNF423.p2	-1.416	ZNF423
NR4A2.p2	-1.440	NR4A2
GGCAGUG	-1.480
LMO2.p2	-1.492	LMO2
FEV.p2	-1.499	FEV
NFIL3.p2	-1.536	NFIL3
ZBTB6.p2	-1.539	ZBTB6
UCCCUUU	-1.544
ZEB1.p2	-1.561	ZEB1
SOX5.p2	-1.576	SOX5
AGUGCAA	-1.593
PAX4.p2	-1.609	PAX4
REST.p3	-1.683	REST
PAX2.p2	-1.709	PAX2
MEF2{A,B,C,D}.p2	-1.731	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NKX3-2.p2	-1.748	NKX3-2
CAGCAGG	-1.765
DMAP1_NCOR{1,2}_SMARC.p2	-1.797	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
HLF.p2	-1.886	HLF
NKX2-3_NKX2-5.p2	-1.891	NKX2-5 NKX2-3
GATA6.p2	-1.899	GATA6
AIRE.p2	-1.920	AIRE
SREBF1,2.p2	-1.954	SREBF1 SREBF2
AAAGUGC	-1.964
GATA1..3.p2	-1.965	GATA1 GATA2 GATA3
EBF1.p2	-1.966	EBF1
POU2F1..3.p2	-1.973	POU2F2 POU2F1 POU2F3
AGCUGCC	-2.009
HBP1_HMGB_SSRP1_UBTF.p2	-2.023	HMGB2 HMGB3 SSRP1 UBTF HBP1
AR.p2	-2.043	AR
AAGUGCU	-2.057
GTF2I.p2	-2.075	GTF2I
ALX1.p2	-2.093	ALX1
HNF4A_NR2F1,2.p2	-2.133	NR2F1 NR2F2 HNF4A
FOXP3.p2	-2.149	FOXP3
RORA.p2	-2.152	RORA
RXRA_VDR{dimer}.p2	-2.171	VDR	$logo of RXRA_VDR{dimer}.p2$
IRF1,2,7.p3	-2.268	IRF1 IRF2 IRF7
TBP.p2	-2.296	TBP
NFIX.p2	-2.366	NFIX
EVI1.p2	-2.390	EVI1
CDC5L.p2	-2.482	CDC5L
CACAGUG	-2.517
HNF1A.p2	-2.522	HNF1A
TEAD1.p2	-2.531	TEAD1 TEAD2 TEAD3 TEAD4
GAGAUGA	-2.548
HIC1.p2	-2.557	HIC1
NANOG{mouse}.p2	-2.590	NANOG
MAZ.p2	-2.817	MAZ
UGUGCUU	-2.829
MYFfamily.p2	-2.832	MYOD1 MYF6 MYF5 MYOG
NFKB1_REL_RELA.p2	-2.852	RELA REL NFKB1
RUNX1..3.p2	-2.934	RUNX1 RUNX3 RUNX2
KLF12.p2	-2.941	KLF12
TFCP2.p2	-2.961	TFCP2
GLI1..3.p2	-2.962	GLI1 GLI2 GLI3
FOX{D1,D2}.p2	-2.979	FOXD2 FOXD1
MTF1.p2	-2.980	MTF1
POU1F1.p2	-3.041	POU1F1
ETS1,2.p2	-3.094	ETS2 ETS1
HAND1,2.p2	-3.206	HAND1 HAND2
SMAD1..7,9.p2	-3.538	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
POU5F1.p2	-3.799	POU5F1
GGCUCAG	-4.017
MYOD1.p2	-4.501	MYOD1
TBX4,5.p2	-4.715	TBX5 TBX4
TGIF1.p2	-5.203	TGIF1
CUCCCAA	-5.758
SNAI1..3.p2	-6.060	SNAI2 SNAI1 SNAI3

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Sample name: NCI60_1_UACC-62

Sorted z-values for every WM.