Epithelial-Mesenchymal Transition, human (Scheel, 2011)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Motif name | Z-value | Associated genes | Profile | Logo |
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ZEB1 | 9.62 |
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YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ | 4.79 |
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MXI1_MYC_MYCN | 3.97 |
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NRF1 | 3.69 |
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ID4_TCF4_SNAI2 | 3.38 |
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TAF1 | 3.20 |
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IRF2_STAT2_IRF8_IRF1 | 3.19 |
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SIX5_SMARCC2_HCFC1 | 3.04 |
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EBF1 | 2.93 |
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MAZ_ZNF281_GTF2F1 | 2.73 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.